RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 IGKV2-24A0A0C4DH68 120 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 NMUP48645 174 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 NPC2P61916 151 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 PKIAP61925 76 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 COX7B2Q8TF08 81 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 PRO1933Q9H354 126 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 XAGE1AQ9HD64 81 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 C16orf90A8MZG2 172 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 SMIM13P0DJ93 91 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 PFN2P35080 140 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 HERVK_113P63121 156 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 PRR3P79522 188 aaKnown RBP2.26□□□□□ -2.05
COL9A1-206ENST00000470652 SYCNQ0VAF6 134 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 JOSD1Q15040 202 aaPredicted RBP2.26□□□□□ -2.05
COL9A1-206ENST00000470652 SOSTDC1Q6X4U4 206 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 RMI2Q96E14 147 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 C14orf144Q96I85 54 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 CARD19Q96LW7 228 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 CAMK2N2Q96S95 79 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
COL9A1-206ENST00000470652 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 J3QQQ9 107 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 LEPROTO15243 131 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 SMR3BP02814 79 aaPredicted RBP2.25□□□□□ -2.05
COL9A1-206ENST00000470652 PLNP26678 52 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 G0S2P27469 103 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 RPL18AQ02543 176 aaKnown RBP2.25□□□□□ -2.05
COL9A1-206ENST00000470652 SMAGPQ0VAQ4 97 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 DEFB116Q30KQ4 102 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 SPATA45Q537H7 98 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 SDIM1Q6ZPB5 146 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 NDUFA12Q9UI09 145 aa2.25□□□□□ -2.05
COL9A1-206ENST00000470652 LRP1Q07954 4544 aaKnown RBP2.25□□□□□ -2.05
COL9A1-206ENST00000470652 ZNF815PA8K554 130 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 H3BRM9 83 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 K7EP13 123 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 NDUFA1O15239 70 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 LGALS3P17931 250 aaKnown RBP2.24□□□□□ -2.05
COL9A1-206ENST00000470652 CKS1BP61024 79 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 CNBPP62633 177 aaKnown RBP2.24□□□□□ -2.05
COL9A1-206ENST00000470652 LINC00483Q53H64 154 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 C6orf226Q5I0X4 101 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 C2orf91Q6ZV80 131 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 SCXQ7RTU7 201 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 FAM19A5Q7Z5A7 132 aaPredicted RBP2.24□□□□□ -2.05
COL9A1-206ENST00000470652 Q8IZM0 81 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 C12orf57Q99622 126 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 ERG28Q9UKR5 140 aa2.24□□□□□ -2.05
COL9A1-206ENST00000470652 C20orf202A1L168 122 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 NCR3O14931 201 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 APOMO95445 188 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 LINC00158P58513 81 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 SEC11AP67812 179 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 LINC00336Q6ZUF6 198 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
COL9A1-206ENST00000470652 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 CIRBP-AS1Q8TBR5 109 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 VAMP8Q9BV40 100 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 SND1-IT1Q9HBX3 110 aa2.23□□□□□ -2.05
COL9A1-206ENST00000470652 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 MYMXA0A1B0GTQ4 84 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 LINC01549A6NIU2 74 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 COX8AP10176 69 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 SRRM2Q9UQ35 2752 aaKnown RBP2.22□□□□□ -2.05
COL9A1-206ENST00000470652 TNXBP22105 4242 aa2.22□□□□□ -2.05
COL9A1-206ENST00000470652 TRBV30A0A0K0K1B3 111 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 LOC107984640A0A0U1RRK4 108 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 TMEM238C9JI98 176 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 NDUFC2-KCTD14E9PQ53 114 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 K7ERJ3 54 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 MOBPQ13875 183 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 IGFL1Q6UW32 110 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 Q6ZSA8 131 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 MUSTN1Q8IVN3 82 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 BOD1L2Q8IYS8 172 aa2.21□□□□□ -2.06
COL9A1-206ENST00000470652 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.2□□□□□ -2.06
COL9A1-206ENST00000470652 PCP4L1A6NKN8 68 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 HSBP1L1C9JCN9 74 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 TLX1NBP0CAT3 122 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 SMIM6P0DI80 62 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 CXCL5P42830 114 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 FXYD2P54710 66 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 KRTAP10-4P60372 401 aaPredicted RBP2.2□□□□□ -2.06
COL9A1-206ENST00000470652 CIRBPQ14011 172 aaKnown RBP2.2□□□□□ -2.06
COL9A1-206ENST00000470652 C5orf47Q569G3 176 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 SCGB1D4Q6XE38 83 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 LINC00308Q8TCZ7 52 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 DPH3Q96FX2 82 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
COL9A1-206ENST00000470652 M0QXV9 152 aa2.19□□□□□ -2.06
COL9A1-206ENST00000470652 CTAG1AP78358 180 aa2.19□□□□□ -2.06
COL9A1-206ENST00000470652 SLC25A34Q6PIV7 304 aa2.19□□□□□ -2.06
COL9A1-206ENST00000470652 SFTA2Q6UW10 78 aa2.19□□□□□ -2.06
COL9A1-206ENST00000470652 LINC00337Q8N6G1 96 aa2.19□□□□□ -2.06
COL9A1-206ENST00000470652 NAA38Q9BRA0 125 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms