RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SPANXB1Q9NS25 103 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-204ENST00000469207 TRAV23DV6A0A075B6W5 121 aa6.68□□□□□ -1.34
HDAC3-204ENST00000469207 LINC00310P59036 64 aa6.68□□□□□ -1.34
HDAC3-204ENST00000469207 IGLV8-61A0A075B6I0 122 aa6.67□□□□□ -1.34
HDAC3-204ENST00000469207 ZNF73O43830 326 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-204ENST00000469207 SNAPINO95295 136 aa6.67□□□□□ -1.34
HDAC3-204ENST00000469207 NDUFC2O95298 119 aa6.67□□□□□ -1.34
HDAC3-204ENST00000469207 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
HDAC3-204ENST00000469207 LEPROTL1O95214 131 aa6.66□□□□□ -1.34
HDAC3-204ENST00000469207 FABP4P15090 132 aa6.66□□□□□ -1.34
HDAC3-204ENST00000469207 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-204ENST00000469207 SVBPQ8N300 66 aa6.66□□□□□ -1.34
HDAC3-204ENST00000469207 LGALS3P17931 250 aaKnown RBP6.65□□□□□ -1.34
HDAC3-204ENST00000469207 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
HDAC3-204ENST00000469207 SERF1AO75920 110 aa6.64□□□□□ -1.35
HDAC3-204ENST00000469207 TRGC2P03986 189 aa6.64□□□□□ -1.35
HDAC3-204ENST00000469207 DPM2O94777 84 aa6.63□□□□□ -1.35
HDAC3-204ENST00000469207 IGKCP01834 107 aa6.63□□□□□ -1.35
HDAC3-204ENST00000469207 PLNP26678 52 aa6.62□□□□□ -1.35
HDAC3-204ENST00000469207 NMUP48645 174 aa6.62□□□□□ -1.35
HDAC3-204ENST00000469207 HERVK_113P61574 105 aa6.62□□□□□ -1.35
HDAC3-204ENST00000469207 NDUFA5Q16718 116 aa6.62□□□□□ -1.35
HDAC3-204ENST00000469207 H7C2G1 150 aa6.61□□□□□ -1.35
HDAC3-204ENST00000469207 SPRR1BP22528 89 aa6.61□□□□□ -1.35
HDAC3-204ENST00000469207 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-204ENST00000469207 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
HDAC3-204ENST00000469207 A0A0G2JQZ4 141 aa6.6□□□□□ -1.35
HDAC3-204ENST00000469207 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-204ENST00000469207 DEFB105AQ8NG35 78 aa6.6□□□□□ -1.35
HDAC3-204ENST00000469207 HINT1P49773 126 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-204ENST00000469207 Q1RN00 199 aa6.59□□□□□ -1.35
HDAC3-204ENST00000469207 LITAFQ99732 161 aa6.59□□□□□ -1.35
HDAC3-204ENST00000469207 LIMD2Q9BT23 127 aa6.59□□□□□ -1.35
HDAC3-204ENST00000469207 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.35
HDAC3-204ENST00000469207 C5orf52A6NGY3 159 aa6.58□□□□□ -1.36
HDAC3-204ENST00000469207 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
HDAC3-204ENST00000469207 LAMTOR3Q9UHA4 124 aa6.58□□□□□ -1.36
HDAC3-204ENST00000469207 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-204ENST00000469207 E9PLD3 99 aa6.57□□□□□ -1.36
HDAC3-204ENST00000469207 CFC1BP0CG36 223 aa6.57□□□□□ -1.36
HDAC3-204ENST00000469207 TAL2Q16559 108 aa6.56□□□□□ -1.36
HDAC3-204ENST00000469207 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
HDAC3-204ENST00000469207 SPANXCQ9NY87 97 aa6.56□□□□□ -1.36
HDAC3-204ENST00000469207 DHRS4-AS1Q9P1J3 65 aa6.56□□□□□ -1.36
HDAC3-204ENST00000469207 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
HDAC3-204ENST00000469207 M0R2T5 61 aa6.54□□□□□ -1.36
HDAC3-204ENST00000469207 COX7BP24311 80 aa6.54□□□□□ -1.36
HDAC3-204ENST00000469207 ELOF1P60002 83 aaKnown RBP6.54□□□□□ -1.36
HDAC3-204ENST00000469207 C6orf99Q4VX62 202 aa6.54□□□□□ -1.36
HDAC3-204ENST00000469207 C1orf195Q5TG92 126 aa6.54□□□□□ -1.36
HDAC3-204ENST00000469207 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
HDAC3-204ENST00000469207 PRO1933Q9H354 126 aa6.53□□□□□ -1.36
HDAC3-204ENST00000469207 CD164Q04900 197 aa6.52□□□□□ -1.37
HDAC3-204ENST00000469207 CBY1Q9Y3M2 126 aa6.52□□□□□ -1.37
HDAC3-204ENST00000469207 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
HDAC3-204ENST00000469207 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
HDAC3-204ENST00000469207 SPANXDQ9BXN6 97 aa6.51□□□□□ -1.37
HDAC3-204ENST00000469207 COLCA2A8K830 154 aa6.5□□□□□ -1.37
HDAC3-204ENST00000469207 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
HDAC3-204ENST00000469207 AKR1D1P51857 326 aa6.5□□□□□ -1.37
HDAC3-204ENST00000469207 ZNF815PA8K554 130 aa6.49□□□□□ -1.37
HDAC3-204ENST00000469207 TIMM17BO60830 172 aa6.49□□□□□ -1.37
HDAC3-204ENST00000469207 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
HDAC3-204ENST00000469207 Q5XG85 94 aa6.48□□□□□ -1.37
HDAC3-204ENST00000469207 LINC00518Q8N0U6 118 aa6.48□□□□□ -1.37
HDAC3-204ENST00000469207 LINC01545Q5VT33 79 aa6.46□□□□□ -1.38
HDAC3-204ENST00000469207 IGLV5-48A0A075B6I7 105 aa6.45□□□□□ -1.38
HDAC3-204ENST00000469207 SLC7A5P1Q8MH63 180 aa6.45□□□□□ -1.38
HDAC3-204ENST00000469207 A6NDN8 102 aa6.44□□□□□ -1.38
HDAC3-204ENST00000469207 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
HDAC3-204ENST00000469207 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 C3orf79P0CE67 100 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-204ENST00000469207 Q6Q795 121 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 PET117Q6UWS5 81 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 MUSTN1Q8IVN3 82 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
HDAC3-204ENST00000469207 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
HDAC3-204ENST00000469207 ANKRD39Q53RE8 183 aa6.4□□□□□ -1.38
HDAC3-204ENST00000469207 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
HDAC3-204ENST00000469207 USH2AO75445 5202 aa6.39□□□□□ -1.39
HDAC3-204ENST00000469207 TCL1BO95988 128 aa6.39□□□□□ -1.39
HDAC3-204ENST00000469207 PCP2Q8IVA1 136 aa6.38□□□□□ -1.39
HDAC3-204ENST00000469207 ATOH7Q8N100 152 aa6.38□□□□□ -1.39
HDAC3-204ENST00000469207 SSPOA2VEC9 5147 aa6.37□□□□□ -1.39
HDAC3-204ENST00000469207 KRTDAPP60985 99 aa6.37□□□□□ -1.39
HDAC3-204ENST00000469207 OBSCN-AS1Q96MR7 158 aa6.37□□□□□ -1.39
HDAC3-204ENST00000469207 IFITM1P13164 125 aa6.36□□□□□ -1.39
HDAC3-204ENST00000469207 A4D1N5 150 aa6.35□□□□□ -1.39
HDAC3-204ENST00000469207 IGFL1Q6UW32 110 aa6.34□□□□□ -1.39
HDAC3-204ENST00000469207 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms