RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
SMARCD3-205ENST00000469154 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
SMARCD3-205ENST00000469154 MEGF8Q7Z7M0 2845 aa9.38□□□□□ -0.91
SMARCD3-205ENST00000469154 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
SMARCD3-205ENST00000469154 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
SMARCD3-205ENST00000469154 Q6ZTC4 211 aa9.36□□□□□ -0.91
SMARCD3-205ENST00000469154 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
SMARCD3-205ENST00000469154 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
SMARCD3-205ENST00000469154 ESRGQ1W209 222 aa9.34□□□□□ -0.91
SMARCD3-205ENST00000469154 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
SMARCD3-205ENST00000469154 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
SMARCD3-205ENST00000469154 COL7A1Q02388 2944 aa9.33□□□□□ -0.92
SMARCD3-205ENST00000469154 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
SMARCD3-205ENST00000469154 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
SMARCD3-205ENST00000469154 Q6ZRP5 223 aa9.32□□□□□ -0.92
SMARCD3-205ENST00000469154 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-205ENST00000469154 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
SMARCD3-205ENST00000469154 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
SMARCD3-205ENST00000469154 PRKDCP78527 4128 aaKnown RBP9.31□□□□□ -0.92
SMARCD3-205ENST00000469154 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
SMARCD3-205ENST00000469154 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
SMARCD3-205ENST00000469154 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
SMARCD3-205ENST00000469154 C11orf45Q8TAV5 145 aa9.29□□□□□ -0.92
SMARCD3-205ENST00000469154 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
SMARCD3-205ENST00000469154 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
SMARCD3-205ENST00000469154 DEFB131BA0A096LNP1 70 aa9.28□□□□□ -0.92
SMARCD3-205ENST00000469154 SCXQ7RTU7 201 aa9.27□□□□□ -0.92
SMARCD3-205ENST00000469154 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
SMARCD3-205ENST00000469154 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
SMARCD3-205ENST00000469154 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
SMARCD3-205ENST00000469154 C7orf33Q8WU49 177 aa9.25□□□□□ -0.93
SMARCD3-205ENST00000469154 OXTP01178 125 aa9.25□□□□□ -0.93
SMARCD3-205ENST00000469154 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
SMARCD3-205ENST00000469154 DNAH10OSP0CZ25 163 aa9.25□□□□□ -0.93
SMARCD3-205ENST00000469154 PLA2G2DQ9UNK4 145 aa9.25□□□□□ -0.93
SMARCD3-205ENST00000469154 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
SMARCD3-205ENST00000469154 FBN3Q75N90 2809 aa9.24□□□□□ -0.93
SMARCD3-205ENST00000469154 H7BZZ5 65 aa9.24□□□□□ -0.93
SMARCD3-205ENST00000469154 SEC61GP60059 68 aa9.23□□□□□ -0.93
SMARCD3-205ENST00000469154 DHRS4-AS1Q9P1J3 65 aa9.22□□□□□ -0.93
SMARCD3-205ENST00000469154 NREPQ16612 68 aa9.22□□□□□ -0.93
SMARCD3-205ENST00000469154 PRYO14603 147 aa9.21□□□□□ -0.93
SMARCD3-205ENST00000469154 Q8N377 158 aa9.21□□□□□ -0.93
SMARCD3-205ENST00000469154 IGLV5-37A0A075B6J1 123 aa9.21□□□□□ -0.94
SMARCD3-205ENST00000469154 IGLV5-48A0A075B6I7 105 aa9.2□□□□□ -0.94
SMARCD3-205ENST00000469154 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
SMARCD3-205ENST00000469154 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
SMARCD3-205ENST00000469154 BPY2O14599 106 aa9.19□□□□□ -0.94
SMARCD3-205ENST00000469154 NDUFC1O43677 76 aa9.19□□□□□ -0.94
SMARCD3-205ENST00000469154 Q6ZRX8 168 aa9.19□□□□□ -0.94
SMARCD3-205ENST00000469154 SNURFQ9Y675 71 aa9.19□□□□□ -0.94
SMARCD3-205ENST00000469154 RMI2Q96E14 147 aa9.19□□□□□ -0.94
SMARCD3-205ENST00000469154 SERP1Q9Y6X1 66 aa9.19□□□□□ -0.94
SMARCD3-205ENST00000469154 A0A1B0GW54 56 aa9.18□□□□□ -0.94
SMARCD3-205ENST00000469154 ERC2-IT1O76042 136 aa9.17□□□□□ -0.94
SMARCD3-205ENST00000469154 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
SMARCD3-205ENST00000469154 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
SMARCD3-205ENST00000469154 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
SMARCD3-205ENST00000469154 C3orf84H3BNL1 204 aa9.16□□□□□ -0.94
SMARCD3-205ENST00000469154 SPRR1AP35321 89 aa9.16□□□□□ -0.94
SMARCD3-205ENST00000469154 F8WEM9 126 aa9.16□□□□□ -0.94
SMARCD3-205ENST00000469154 FUSP35637 526 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCD3-205ENST00000469154 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
SMARCD3-205ENST00000469154 Q8N9L7 120 aa9.15□□□□□ -0.94
SMARCD3-205ENST00000469154 TGP01266 2768 aa9.15□□□□□ -0.94
SMARCD3-205ENST00000469154 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
SMARCD3-205ENST00000469154 Q9BRP9 147 aa9.15□□□□□ -0.94
SMARCD3-205ENST00000469154 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
SMARCD3-205ENST00000469154 Q5XG85 94 aa9.14□□□□□ -0.95
SMARCD3-205ENST00000469154 FAM168BA1KXE4 195 aa9.13□□□□□ -0.95
SMARCD3-205ENST00000469154 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
SMARCD3-205ENST00000469154 TNP2Q05952 138 aa9.13□□□□□ -0.95
SMARCD3-205ENST00000469154 TMEM254Q8TBM7 123 aa9.13□□□□□ -0.95
SMARCD3-205ENST00000469154 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
SMARCD3-205ENST00000469154 C1orf137Q5JT78 98 aa9.11□□□□□ -0.95
SMARCD3-205ENST00000469154 A0A1W2PNM2 257 aa9.11□□□□□ -0.95
SMARCD3-205ENST00000469154 OCR1Q9BZK8 76 aa9.11□□□□□ -0.95
SMARCD3-205ENST00000469154 MRPL55Q7Z7F7 128 aaKnown RBP9.1□□□□□ -0.95
SMARCD3-205ENST00000469154 Q8NBF4 154 aa9.1□□□□□ -0.95
SMARCD3-205ENST00000469154 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
SMARCD3-205ENST00000469154 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
SMARCD3-205ENST00000469154 C4orf26Q17RF5 130 aa9.09□□□□□ -0.96
SMARCD3-205ENST00000469154 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
SMARCD3-205ENST00000469154 UBE2BP63146 152 aa9.07□□□□□ -0.96
SMARCD3-205ENST00000469154 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
SMARCD3-205ENST00000469154 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
SMARCD3-205ENST00000469154 REG3GQ6UW15 175 aa9.06□□□□□ -0.96
SMARCD3-205ENST00000469154 HRCT1Q6UXD1 115 aa9.05□□□□□ -0.96
SMARCD3-205ENST00000469154 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
SMARCD3-205ENST00000469154 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
SMARCD3-205ENST00000469154 NUPR2A6NF83 97 aa9.04□□□□□ -0.96
SMARCD3-205ENST00000469154 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
SMARCD3-205ENST00000469154 DNAH1Q9P2D7 4330 aa9.03□□□□□ -0.96
SMARCD3-205ENST00000469154 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
SMARCD3-205ENST00000469154 APLNQ9ULZ1 77 aa9.02□□□□□ -0.97
SMARCD3-205ENST00000469154 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
SMARCD3-205ENST00000469154 LYSTQ99698 3801 aa9□□□□□ -0.97
SMARCD3-205ENST00000469154 DSCR10P59022 87 aa8.99□□□□□ -0.97
SMARCD3-205ENST00000469154 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
SMARCD3-205ENST00000469154 LCE6AA0A183 80 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms