RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 HERVK_113P61574 105 aa9.56□□□□□ -0.88
TRIM56-203ENST00000467847 ZNF73O43830 326 aaPredicted RBP9.54□□□□□ -0.88
TRIM56-203ENST00000467847 DPM2O94777 84 aa9.54□□□□□ -0.88
TRIM56-203ENST00000467847 SERF1AO75920 110 aa9.53□□□□□ -0.88
TRIM56-203ENST00000467847 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
TRIM56-203ENST00000467847 PMCHL2Q9BQD1 86 aa9.53□□□□□ -0.88
TRIM56-203ENST00000467847 NPC2P61916 151 aa9.52□□□□□ -0.89
TRIM56-203ENST00000467847 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
TRIM56-203ENST00000467847 IGKCP01834 107 aa9.51□□□□□ -0.89
TRIM56-203ENST00000467847 TRGC2P03986 189 aa9.51□□□□□ -0.89
TRIM56-203ENST00000467847 LINC00310P59036 64 aa9.51□□□□□ -0.89
TRIM56-203ENST00000467847 SOSTDC1Q6X4U4 206 aa9.51□□□□□ -0.89
TRIM56-203ENST00000467847 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
TRIM56-203ENST00000467847 FABP4P15090 132 aa9.5□□□□□ -0.89
TRIM56-203ENST00000467847 C5orf52A6NGY3 159 aa9.49□□□□□ -0.89
TRIM56-203ENST00000467847 HINT1P49773 126 aaPredicted RBP9.49□□□□□ -0.89
TRIM56-203ENST00000467847 ADAMTSL4-AS1Q5T5F5 129 aa9.49□□□□□ -0.89
TRIM56-203ENST00000467847 A0A0J9YXY3 114 aa9.48□□□□□ -0.89
TRIM56-203ENST00000467847 CBY1Q9Y3M2 126 aa9.48□□□□□ -0.89
TRIM56-203ENST00000467847 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
TRIM56-203ENST00000467847 LIMD2Q9BT23 127 aa9.46□□□□□ -0.9
TRIM56-203ENST00000467847 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
TRIM56-203ENST00000467847 SLC25A34Q6PIV7 304 aa9.44□□□□□ -0.9
TRIM56-203ENST00000467847 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
TRIM56-203ENST00000467847 E9PLD3 99 aa9.43□□□□□ -0.9
TRIM56-203ENST00000467847 SPRR1BP22528 89 aa9.43□□□□□ -0.9
TRIM56-203ENST00000467847 DHRS4-AS1Q9P1J3 65 aa9.43□□□□□ -0.9
TRIM56-203ENST00000467847 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
TRIM56-203ENST00000467847 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
TRIM56-203ENST00000467847 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
TRIM56-203ENST00000467847 LINC00308Q8TCZ7 52 aa9.41□□□□□ -0.9
TRIM56-203ENST00000467847 LAMTOR3Q9UHA4 124 aa9.41□□□□□ -0.9
TRIM56-203ENST00000467847 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
TRIM56-203ENST00000467847 KRTAP19-2Q3LHN2 52 aa9.4□□□□□ -0.9
TRIM56-203ENST00000467847 LITAFQ99732 161 aa9.39□□□□□ -0.91
TRIM56-203ENST00000467847 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
TRIM56-203ENST00000467847 TIMM17BO60830 172 aa9.37□□□□□ -0.91
TRIM56-203ENST00000467847 CFC1BP0CG36 223 aa9.37□□□□□ -0.91
TRIM56-203ENST00000467847 MT1HP80294 61 aa9.37□□□□□ -0.91
TRIM56-203ENST00000467847 COX7BP24311 80 aa9.36□□□□□ -0.91
TRIM56-203ENST00000467847 ELOF1P60002 83 aaKnown RBP9.36□□□□□ -0.91
TRIM56-203ENST00000467847 Q1RN00 199 aa9.35□□□□□ -0.91
TRIM56-203ENST00000467847 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
TRIM56-203ENST00000467847 SYS1-DBNDD2H3BUS1 97 aa9.34□□□□□ -0.91
TRIM56-203ENST00000467847 CD164Q04900 197 aa9.34□□□□□ -0.91
TRIM56-203ENST00000467847 TAL2Q16559 108 aa9.34□□□□□ -0.91
TRIM56-203ENST00000467847 C6orf99Q4VX62 202 aa9.34□□□□□ -0.91
TRIM56-203ENST00000467847 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
TRIM56-203ENST00000467847 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
TRIM56-203ENST00000467847 H7C2G1 150 aa9.32□□□□□ -0.92
TRIM56-203ENST00000467847 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
TRIM56-203ENST00000467847 TEX49A0A1B0GTD5 131 aa9.31□□□□□ -0.92
TRIM56-203ENST00000467847 COLCA2A8K830 154 aa9.31□□□□□ -0.92
TRIM56-203ENST00000467847 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
TRIM56-203ENST00000467847 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
TRIM56-203ENST00000467847 AKR1D1P51857 326 aa9.27□□□□□ -0.93
TRIM56-203ENST00000467847 Q5XG85 94 aa9.27□□□□□ -0.93
TRIM56-203ENST00000467847 TRBV7-6A0A0J9YX20 115 aa9.26□□□□□ -0.93
TRIM56-203ENST00000467847 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
TRIM56-203ENST00000467847 PET117Q6UWS5 81 aa9.26□□□□□ -0.93
TRIM56-203ENST00000467847 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
TRIM56-203ENST00000467847 KRTAP9-7A8MTY7 169 aa9.25□□□□□ -0.93
TRIM56-203ENST00000467847 A0A0G2JQZ4 141 aa9.24□□□□□ -0.93
TRIM56-203ENST00000467847 A0A1B0GWB2 263 aa9.24□□□□□ -0.93
TRIM56-203ENST00000467847 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 KRTAP10-6P60371 365 aaPredicted RBP9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
TRIM56-203ENST00000467847 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
TRIM56-203ENST00000467847 A6NDN8 102 aa9.22□□□□□ -0.93
TRIM56-203ENST00000467847 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
TRIM56-203ENST00000467847 M0R2T5 61 aa9.21□□□□□ -0.94
TRIM56-203ENST00000467847 SLC7A5P1Q8MH63 180 aa9.21□□□□□ -0.94
TRIM56-203ENST00000467847 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
TRIM56-203ENST00000467847 C3orf79P0CE67 100 aa9.19□□□□□ -0.94
TRIM56-203ENST00000467847 COX6B2Q6YFQ2 88 aa9.19□□□□□ -0.94
TRIM56-203ENST00000467847 IFITM1P13164 125 aa9.18□□□□□ -0.94
TRIM56-203ENST00000467847 A4D1N5 150 aa9.17□□□□□ -0.94
TRIM56-203ENST00000467847 TCL1BO95988 128 aa9.17□□□□□ -0.94
TRIM56-203ENST00000467847 KRTDAPP60985 99 aa9.17□□□□□ -0.94
TRIM56-203ENST00000467847 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
TRIM56-203ENST00000467847 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.94
TRIM56-203ENST00000467847 Q6ZVH6 145 aa9.15□□□□□ -0.94
TRIM56-203ENST00000467847 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.94
TRIM56-203ENST00000467847 FLGP20930 4061 aaPredicted RBP9.14□□□□□ -0.95
TRIM56-203ENST00000467847 ANKRD39Q53RE8 183 aa9.13□□□□□ -0.95
TRIM56-203ENST00000467847 TRAV13-2A0A0B4J235 113 aa9.12□□□□□ -0.95
TRIM56-203ENST00000467847 C20orf202A1L168 122 aa9.12□□□□□ -0.95
TRIM56-203ENST00000467847 F8WEM9 126 aa9.12□□□□□ -0.95
TRIM56-203ENST00000467847 SMIM11BQ8TCY0 68 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms