RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
UFD1-206ENST00000466373 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
UFD1-206ENST00000466373 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
UFD1-206ENST00000466373 Q6ZVQ6 151 aa6.8□□□□□ -1.32
UFD1-206ENST00000466373 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
UFD1-206ENST00000466373 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
UFD1-206ENST00000466373 LINC01547P58512 204 aaPredicted RBP6.79□□□□□ -1.32
UFD1-206ENST00000466373 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
UFD1-206ENST00000466373 ATP5EP2Q5VTU8 51 aa6.79□□□□□ -1.32
UFD1-206ENST00000466373 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
UFD1-206ENST00000466373 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
UFD1-206ENST00000466373 GHRHP01286 108 aa6.78□□□□□ -1.32
UFD1-206ENST00000466373 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
UFD1-206ENST00000466373 TRBV7-4A0A0J9YYF1 115 aa6.77□□□□□ -1.33
UFD1-206ENST00000466373 CRYGAP11844 174 aa6.77□□□□□ -1.33
UFD1-206ENST00000466373 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.33
UFD1-206ENST00000466373 K7EIL1 84 aa6.76□□□□□ -1.33
UFD1-206ENST00000466373 H3BQ85 93 aa6.75□□□□□ -1.33
UFD1-206ENST00000466373 PDE6GP18545 87 aa6.75□□□□□ -1.33
UFD1-206ENST00000466373 KCNQ1DNQ9H478 68 aa6.75□□□□□ -1.33
UFD1-206ENST00000466373 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
UFD1-206ENST00000466373 TM2D3Q9BRN9 247 aa6.74□□□□□ -1.33
UFD1-206ENST00000466373 C3orf84H3BNL1 204 aa6.73□□□□□ -1.33
UFD1-206ENST00000466373 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
UFD1-206ENST00000466373 F8WDY8 70 aa6.73□□□□□ -1.33
UFD1-206ENST00000466373 Q8N377 158 aa6.72□□□□□ -1.33
UFD1-206ENST00000466373 DNAH7Q8WXX0 4024 aa6.72□□□□□ -1.33
UFD1-206ENST00000466373 SRRM2Q9UQ35 2752 aaKnown RBP6.72□□□□□ -1.33
UFD1-206ENST00000466373 Q8N9L7 120 aa6.72□□□□□ -1.33
UFD1-206ENST00000466373 ST20-AS1Q8NBB2 130 aa6.72□□□□□ -1.33
UFD1-206ENST00000466373 Q9BRP9 147 aa6.71□□□□□ -1.33
UFD1-206ENST00000466373 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
UFD1-206ENST00000466373 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
UFD1-206ENST00000466373 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
UFD1-206ENST00000466373 C20orf197Q8N268 126 aa6.7□□□□□ -1.34
UFD1-206ENST00000466373 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
UFD1-206ENST00000466373 Q6ZRX8 168 aa6.7□□□□□ -1.34
UFD1-206ENST00000466373 CXCL6P80162 114 aa6.7□□□□□ -1.34
UFD1-206ENST00000466373 RMI2Q96E14 147 aa6.69□□□□□ -1.34
UFD1-206ENST00000466373 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
UFD1-206ENST00000466373 IGKV2-24A0A0C4DH68 120 aa6.69□□□□□ -1.34
UFD1-206ENST00000466373 ERC2-IT1O76042 136 aa6.68□□□□□ -1.34
UFD1-206ENST00000466373 MRPL55Q7Z7F7 128 aaKnown RBP6.68□□□□□ -1.34
UFD1-206ENST00000466373 KRTAP4-16G5E9R7 235 aaPredicted RBP6.68□□□□□ -1.34
UFD1-206ENST00000466373 UBE2BP63146 152 aa6.68□□□□□ -1.34
UFD1-206ENST00000466373 NREPQ16612 68 aa6.67□□□□□ -1.34
UFD1-206ENST00000466373 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
UFD1-206ENST00000466373 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
UFD1-206ENST00000466373 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
UFD1-206ENST00000466373 PRYO14603 147 aa6.66□□□□□ -1.34
UFD1-206ENST00000466373 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.66□□□□□ -1.34
UFD1-206ENST00000466373 BPY2O14599 106 aa6.65□□□□□ -1.34
UFD1-206ENST00000466373 PSCAO43653 123 aa6.65□□□□□ -1.34
UFD1-206ENST00000466373 SPRR1AP35321 89 aa6.65□□□□□ -1.34
UFD1-206ENST00000466373 SNURFQ9Y675 71 aa6.65□□□□□ -1.35
UFD1-206ENST00000466373 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
UFD1-206ENST00000466373 TRAV7A0A075B6U4 112 aa6.64□□□□□ -1.35
UFD1-206ENST00000466373 A0A096LNI7 61 aa6.64□□□□□ -1.35
UFD1-206ENST00000466373 TMEM258P61165 79 aa6.64□□□□□ -1.35
UFD1-206ENST00000466373 IGLV5-48A0A075B6I7 105 aa6.64□□□□□ -1.35
UFD1-206ENST00000466373 UBE2DNLQ8IWF7 75 aa6.64□□□□□ -1.35
UFD1-206ENST00000466373 A0A0G2JQZ4 141 aa6.63□□□□□ -1.35
UFD1-206ENST00000466373 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
UFD1-206ENST00000466373 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
UFD1-206ENST00000466373 C1orf137Q5JT78 98 aa6.63□□□□□ -1.35
UFD1-206ENST00000466373 REG3GQ6UW15 175 aa6.63□□□□□ -1.35
UFD1-206ENST00000466373 PRLHP81277 87 aa6.63□□□□□ -1.35
UFD1-206ENST00000466373 J3KT08 172 aa6.62□□□□□ -1.35
UFD1-206ENST00000466373 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.352e-9■□□□□ 9
UFD1-206ENST00000466373 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
UFD1-206ENST00000466373 IGKV4-1P06312 121 aa6.61□□□□□ -1.35
UFD1-206ENST00000466373 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
UFD1-206ENST00000466373 TNP2Q05952 138 aa6.6□□□□□ -1.35
UFD1-206ENST00000466373 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
UFD1-206ENST00000466373 OXTP01178 125 aa6.59□□□□□ -1.35
UFD1-206ENST00000466373 C16orf90A8MZG2 172 aa6.58□□□□□ -1.36
UFD1-206ENST00000466373 H7BZZ5 65 aa6.58□□□□□ -1.36
UFD1-206ENST00000466373 BCE1O60756 84 aa6.58□□□□□ -1.36
UFD1-206ENST00000466373 Q8NBF4 154 aa6.58□□□□□ -1.36
UFD1-206ENST00000466373 APLNQ9ULZ1 77 aa6.58□□□□□ -1.36
UFD1-206ENST00000466373 MDFIQ99750 246 aa6.57□□□□□ -1.36
UFD1-206ENST00000466373 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
UFD1-206ENST00000466373 SMIM29Q86T20 159 aa6.57□□□□□ -1.36
UFD1-206ENST00000466373 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
UFD1-206ENST00000466373 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
UFD1-206ENST00000466373 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
UFD1-206ENST00000466373 CNBPP62633 177 aaKnown RBP6.56□□□□□ -1.36
UFD1-206ENST00000466373 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
UFD1-206ENST00000466373 F8WEM9 126 aa6.56□□□□□ -1.36
UFD1-206ENST00000466373 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
UFD1-206ENST00000466373 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
UFD1-206ENST00000466373 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
UFD1-206ENST00000466373 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
UFD1-206ENST00000466373 DEFB116Q30KQ4 102 aa6.55□□□□□ -1.36
UFD1-206ENST00000466373 IGFL1Q6UW32 110 aa6.53□□□□□ -1.36
UFD1-206ENST00000466373 TMEM254Q8TBM7 123 aa6.53□□□□□ -1.36
UFD1-206ENST00000466373 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
UFD1-206ENST00000466373 PRKDCP78527 4128 aaKnown RBP6.53□□□□□ -1.36
UFD1-206ENST00000466373 FAM30AQ9NZY2 134 aa6.53□□□□□ -1.36
UFD1-206ENST00000466373 K7EQZ3 153 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms