RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 H0Y8G0 127 aa8□□□□□ -1.13
MCF2L-220ENST00000464800 SERF1AO75920 110 aa8□□□□□ -1.13
MCF2L-220ENST00000464800 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
MCF2L-220ENST00000464800 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
MCF2L-220ENST00000464800 Q9BRP9 147 aa8□□□□□ -1.13
MCF2L-220ENST00000464800 IGLV8-61A0A075B6I0 122 aa7.99□□□□□ -1.13
MCF2L-220ENST00000464800 TRBV10-2A0A0K0K1G8 114 aa7.99□□□□□ -1.13
MCF2L-220ENST00000464800 PCOTHQ58A44 107 aa7.99□□□□□ -1.13
MCF2L-220ENST00000464800 Q6ZRX8 168 aa7.99□□□□□ -1.13
MCF2L-220ENST00000464800 LEPROTO15243 131 aa7.98□□□□□ -1.13
MCF2L-220ENST00000464800 LORP23490 312 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-220ENST00000464800 LINC00310P59036 64 aa7.97□□□□□ -1.13
MCF2L-220ENST00000464800 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-220ENST00000464800 S100A6P06703 90 aa7.96□□□□□ -1.14
MCF2L-220ENST00000464800 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
MCF2L-220ENST00000464800 J3QQQ9 107 aa7.95□□□□□ -1.14
MCF2L-220ENST00000464800 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
MCF2L-220ENST00000464800 PLNP26678 52 aa7.95□□□□□ -1.14
MCF2L-220ENST00000464800 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
MCF2L-220ENST00000464800 S100A7L2Q5SY68 101 aa7.95□□□□□ -1.14
MCF2L-220ENST00000464800 MIEN1Q9BRT3 115 aa7.95□□□□□ -1.14
MCF2L-220ENST00000464800 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
MCF2L-220ENST00000464800 JOSD1Q15040 202 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-220ENST00000464800 TRAV23DV6A0A075B6W5 121 aa7.93□□□□□ -1.14
MCF2L-220ENST00000464800 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
MCF2L-220ENST00000464800 NDUFC2O95298 119 aa7.93□□□□□ -1.14
MCF2L-220ENST00000464800 NMUP48645 174 aa7.93□□□□□ -1.14
MCF2L-220ENST00000464800 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
MCF2L-220ENST00000464800 M0R2T5 61 aa7.91□□□□□ -1.14
MCF2L-220ENST00000464800 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
MCF2L-220ENST00000464800 DPM2O94777 84 aa7.91□□□□□ -1.14
MCF2L-220ENST00000464800 LGALS3P17931 250 aaKnown RBP7.91□□□□□ -1.14
MCF2L-220ENST00000464800 HERVK_113P61574 105 aa7.91□□□□□ -1.14
MCF2L-220ENST00000464800 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
MCF2L-220ENST00000464800 PMCHL2Q9BQD1 86 aa7.91□□□□□ -1.14
MCF2L-220ENST00000464800 HSPB8Q9UJY1 196 aa7.91□□□□□ -1.14
MCF2L-220ENST00000464800 TMA7Q9Y2S6 64 aaKnown RBP7.91□□□□□ -1.14
MCF2L-220ENST00000464800 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
MCF2L-220ENST00000464800 FABP4P15090 132 aa7.9□□□□□ -1.14
MCF2L-220ENST00000464800 NPC2P61916 151 aa7.9□□□□□ -1.14
MCF2L-220ENST00000464800 SOSTDC1Q6X4U4 206 aa7.9□□□□□ -1.14
MCF2L-220ENST00000464800 IGKCP01834 107 aa7.89□□□□□ -1.15
MCF2L-220ENST00000464800 S100A2P29034 98 aa7.89□□□□□ -1.15
MCF2L-220ENST00000464800 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
MCF2L-220ENST00000464800 SNRPEP62304 92 aaKnown RBP7.88□□□□□ -1.15
MCF2L-220ENST00000464800 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
MCF2L-220ENST00000464800 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
MCF2L-220ENST00000464800 A0A0J9YXY3 114 aa7.87□□□□□ -1.15
MCF2L-220ENST00000464800 C5orf52A6NGY3 159 aa7.87□□□□□ -1.15
MCF2L-220ENST00000464800 HINT1P49773 126 aaPredicted RBP7.86□□□□□ -1.15
MCF2L-220ENST00000464800 SLC25A34Q6PIV7 304 aa7.85□□□□□ -1.15
MCF2L-220ENST00000464800 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
MCF2L-220ENST00000464800 CBY1Q9Y3M2 126 aa7.85□□□□□ -1.15
MCF2L-220ENST00000464800 HIST1H2BLQ99880 126 aa7.84□□□□□ -1.15
MCF2L-220ENST00000464800 E9PLD3 99 aa7.83□□□□□ -1.16
MCF2L-220ENST00000464800 SPRR1BP22528 89 aa7.83□□□□□ -1.16
MCF2L-220ENST00000464800 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
MCF2L-220ENST00000464800 C3orf79P0CE67 100 aa7.82□□□□□ -1.16
MCF2L-220ENST00000464800 KRTDAPP60985 99 aa7.82□□□□□ -1.16
MCF2L-220ENST00000464800 OR13C6PQ8NH95 151 aa7.82□□□□□ -1.16
MCF2L-220ENST00000464800 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
MCF2L-220ENST00000464800 SPANXCQ9NY87 97 aa7.81□□□□□ -1.16
MCF2L-220ENST00000464800 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
MCF2L-220ENST00000464800 LAMTOR3Q9UHA4 124 aa7.81□□□□□ -1.16
MCF2L-220ENST00000464800 PET117Q6UWS5 81 aa7.8□□□□□ -1.16
MCF2L-220ENST00000464800 LITAFQ99732 161 aa7.8□□□□□ -1.16
MCF2L-220ENST00000464800 C20orf202A1L168 122 aa7.79□□□□□ -1.16
MCF2L-220ENST00000464800 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
MCF2L-220ENST00000464800 CD164Q04900 197 aa7.78□□□□□ -1.16
MCF2L-220ENST00000464800 TIMM17BO60830 172 aa7.77□□□□□ -1.17
MCF2L-220ENST00000464800 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
MCF2L-220ENST00000464800 SPANXDQ9BXN6 97 aa7.77□□□□□ -1.17
MCF2L-220ENST00000464800 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
MCF2L-220ENST00000464800 H7C2G1 150 aa7.76□□□□□ -1.17
MCF2L-220ENST00000464800 COX7BP24311 80 aa7.76□□□□□ -1.17
MCF2L-220ENST00000464800 ELOF1P60002 83 aaKnown RBP7.76□□□□□ -1.17
MCF2L-220ENST00000464800 AKR1D1P51857 326 aa7.75□□□□□ -1.17
MCF2L-220ENST00000464800 TAL2Q16559 108 aa7.75□□□□□ -1.17
MCF2L-220ENST00000464800 Q1RN00 199 aa7.75□□□□□ -1.17
MCF2L-220ENST00000464800 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
MCF2L-220ENST00000464800 PRO1933Q9H354 126 aa7.75□□□□□ -1.17
MCF2L-220ENST00000464800 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
MCF2L-220ENST00000464800 C6orf99Q4VX62 202 aa7.74□□□□□ -1.17
MCF2L-220ENST00000464800 LINC00518Q8N0U6 118 aa7.74□□□□□ -1.17
MCF2L-220ENST00000464800 ZNF815PA8K554 130 aa7.73□□□□□ -1.17
MCF2L-220ENST00000464800 C1orf195Q5TG92 126 aa7.73□□□□□ -1.17
MCF2L-220ENST00000464800 Q5XG85 94 aa7.73□□□□□ -1.17
MCF2L-220ENST00000464800 FLGP20930 4061 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-220ENST00000464800 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
MCF2L-220ENST00000464800 SCGB1D1O95968 90 aa7.72□□□□□ -1.17
MCF2L-220ENST00000464800 ATOH7Q8N100 152 aa7.71□□□□□ -1.18
MCF2L-220ENST00000464800 TTTY13Q9BZ97 58 aa7.71□□□□□ -1.18
MCF2L-220ENST00000464800 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
MCF2L-220ENST00000464800 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
MCF2L-220ENST00000464800 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
MCF2L-220ENST00000464800 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
MCF2L-220ENST00000464800 A0A1B0GWB2 263 aa7.66□□□□□ -1.18
MCF2L-220ENST00000464800 IGLV5-48A0A075B6I7 105 aa7.65□□□□□ -1.18
MCF2L-220ENST00000464800 Q6Q795 121 aa7.65□□□□□ -1.18
MCF2L-220ENST00000464800 A6NDN8 102 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms