RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 WFDC10BQ8IUB3 73 aa8.32□□□□□ -1.08
CLCNKA-204ENST00000464764 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
CLCNKA-204ENST00000464764 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
CLCNKA-204ENST00000464764 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
CLCNKA-204ENST00000464764 MRAPQ8TCY5 172 aa8.31□□□□□ -1.08
CLCNKA-204ENST00000464764 SPART-AS1P0CW21 52 aa8.29□□□□□ -1.08
CLCNKA-204ENST00000464764 HECTD1Q9ULT8 2610 aa8.29□□□□□ -1.08
CLCNKA-204ENST00000464764 M0R378 163 aa8.28□□□□□ -1.08
CLCNKA-204ENST00000464764 Q6ZRP5 223 aa8.28□□□□□ -1.08
CLCNKA-204ENST00000464764 H3BQ85 93 aa8.28□□□□□ -1.08
CLCNKA-204ENST00000464764 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
CLCNKA-204ENST00000464764 OCR1Q9BZK8 76 aa8.27□□□□□ -1.09
CLCNKA-204ENST00000464764 APOC4P55056 127 aa8.26□□□□□ -1.09
CLCNKA-204ENST00000464764 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
CLCNKA-204ENST00000464764 PRO0628Q9UI54 55 aa8.26□□□□□ -1.09
CLCNKA-204ENST00000464764 TENM3Q9P273 2699 aa8.26□□□□□ -1.09
CLCNKA-204ENST00000464764 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
CLCNKA-204ENST00000464764 NDUFC1O43677 76 aa8.25□□□□□ -1.09
CLCNKA-204ENST00000464764 PRR4Q16378 134 aa8.25□□□□□ -1.09
CLCNKA-204ENST00000464764 FAM30AQ9NZY2 134 aa8.25□□□□□ -1.09
CLCNKA-204ENST00000464764 EGFEM1PQ0D2K5 195 aa8.25□□□□□ -1.09
CLCNKA-204ENST00000464764 ANK2Q01484 3957 aa8.24□□□□□ -1.09
CLCNKA-204ENST00000464764 Q8N377 158 aa8.24□□□□□ -1.09
CLCNKA-204ENST00000464764 SERTAD4-AS1Q5TG53 156 aa8.23□□□□□ -1.09
CLCNKA-204ENST00000464764 PRYO14603 147 aa8.23□□□□□ -1.09
CLCNKA-204ENST00000464764 RETNQ9HD89 108 aa8.23□□□□□ -1.09
CLCNKA-204ENST00000464764 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
CLCNKA-204ENST00000464764 KPRPQ5T749 579 aaPredicted RBP8.22□□□□□ -1.09
CLCNKA-204ENST00000464764 SMIM29Q86T20 159 aa8.21□□□□□ -1.09
CLCNKA-204ENST00000464764 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
CLCNKA-204ENST00000464764 IGKV2D-24A0A075B6R9 120 aa8.2□□□□□ -1.1
CLCNKA-204ENST00000464764 Q6ZTC4 211 aa8.2□□□□□ -1.1
CLCNKA-204ENST00000464764 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
CLCNKA-204ENST00000464764 C7orf33Q8WU49 177 aa8.2□□□□□ -1.1
CLCNKA-204ENST00000464764 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
CLCNKA-204ENST00000464764 NSD1Q96L73 2696 aaPredicted RBP8.19□□□□□ -1.1
CLCNKA-204ENST00000464764 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
CLCNKA-204ENST00000464764 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
CLCNKA-204ENST00000464764 ESRGQ1W209 222 aa8.18□□□□□ -1.1
CLCNKA-204ENST00000464764 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
CLCNKA-204ENST00000464764 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
CLCNKA-204ENST00000464764 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
CLCNKA-204ENST00000464764 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
CLCNKA-204ENST00000464764 MAST4O15021 2626 aa8.17□□□□□ -1.1
CLCNKA-204ENST00000464764 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
CLCNKA-204ENST00000464764 Q9BRP9 147 aa8.17□□□□□ -1.1
CLCNKA-204ENST00000464764 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
CLCNKA-204ENST00000464764 KCNQ1DNQ9H478 68 aa8.16□□□□□ -1.1
CLCNKA-204ENST00000464764 FLNBO75369 2602 aaKnown RBP8.16□□□□□ -1.1
CLCNKA-204ENST00000464764 DEFB116Q30KQ4 102 aa8.16□□□□□ -1.1
CLCNKA-204ENST00000464764 IGLV5-48A0A075B6I7 105 aa8.15□□□□□ -1.1
CLCNKA-204ENST00000464764 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
CLCNKA-204ENST00000464764 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
CLCNKA-204ENST00000464764 PSPHP1O15172 72 aa8.12□□□□□ -1.11
CLCNKA-204ENST00000464764 INAFM1C9JVW0 142 aa8.12□□□□□ -1.11
CLCNKA-204ENST00000464764 K7EQZ3 153 aa8.12□□□□□ -1.11
CLCNKA-204ENST00000464764 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
CLCNKA-204ENST00000464764 DSCR10P59022 87 aa8.11□□□□□ -1.11
CLCNKA-204ENST00000464764 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
CLCNKA-204ENST00000464764 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
CLCNKA-204ENST00000464764 Q6ZRX8 168 aa8.11□□□□□ -1.11
CLCNKA-204ENST00000464764 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
CLCNKA-204ENST00000464764 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
CLCNKA-204ENST00000464764 KRTAP7-1Q8IUC3 87 aa8.1□□□□□ -1.11
CLCNKA-204ENST00000464764 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
CLCNKA-204ENST00000464764 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
CLCNKA-204ENST00000464764 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
CLCNKA-204ENST00000464764 TNP2Q05952 138 aa8.09□□□□□ -1.11
CLCNKA-204ENST00000464764 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
CLCNKA-204ENST00000464764 Q8NBF4 154 aa8.09□□□□□ -1.12
CLCNKA-204ENST00000464764 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
CLCNKA-204ENST00000464764 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
CLCNKA-204ENST00000464764 hDV103S1A0JD37 113 aa8.07□□□□□ -1.12
CLCNKA-204ENST00000464764 DHRS4-AS1Q9P1J3 65 aa8.07□□□□□ -1.12
CLCNKA-204ENST00000464764 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.06□□□□□ -1.12
CLCNKA-204ENST00000464764 STAB1Q9NY15 2570 aa8.06□□□□□ -1.12
CLCNKA-204ENST00000464764 UBE2BP63146 152 aa8.06□□□□□ -1.12
CLCNKA-204ENST00000464764 WFDC13Q8IUB5 93 aa8.06□□□□□ -1.12
CLCNKA-204ENST00000464764 LINC01556Q5JQF7 62 aa8.05□□□□□ -1.12
CLCNKA-204ENST00000464764 LCE6AA0A183 80 aa8.04□□□□□ -1.12
CLCNKA-204ENST00000464764 KRTAP10-11P60412 298 aa8.04□□□□□ -1.12
CLCNKA-204ENST00000464764 DEFB131BA0A096LNP1 70 aa8.04□□□□□ -1.12
CLCNKA-204ENST00000464764 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
CLCNKA-204ENST00000464764 SPRR4Q96PI1 79 aa8.03□□□□□ -1.12
CLCNKA-204ENST00000464764 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
CLCNKA-204ENST00000464764 H3BNG1 76 aa8.03□□□□□ -1.12
CLCNKA-204ENST00000464764 SPRR1AP35321 89 aa8.02□□□□□ -1.13
CLCNKA-204ENST00000464764 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
CLCNKA-204ENST00000464764 V9GYY9 64 aa8.01□□□□□ -1.13
CLCNKA-204ENST00000464764 PSCAO43653 123 aa8.01□□□□□ -1.13
CLCNKA-204ENST00000464764 RPL37AP61513 92 aaKnown RBP8.01□□□□□ -1.13
CLCNKA-204ENST00000464764 HCG22E2RYF7 251 aa8□□□□□ -1.13
CLCNKA-204ENST00000464764 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
CLCNKA-204ENST00000464764 LYSTQ99698 3801 aa8□□□□□ -1.13
CLCNKA-204ENST00000464764 DNAH1Q9P2D7 4330 aa7.99□□□□□ -1.13
CLCNKA-204ENST00000464764 A8MU10 97 aa7.99□□□□□ -1.13
CLCNKA-204ENST00000464764 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
CLCNKA-204ENST00000464764 PRLHP81277 87 aa7.98□□□□□ -1.13
CLCNKA-204ENST00000464764 IGFL1Q6UW32 110 aa7.98□□□□□ -1.13
CLCNKA-204ENST00000464764 KMT2BQ9UMN6 2715 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms