RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 Q6ZQY7 126 aa8.21□□□□□ -1.09
COL4A6-204ENST00000461897 FAM19A1Q7Z5A9 133 aa8.21□□□□□ -1.1
COL4A6-204ENST00000461897 LAMTOR3Q9UHA4 124 aa8.21□□□□□ -1.1
COL4A6-204ENST00000461897 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
COL4A6-204ENST00000461897 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-204ENST00000461897 VPREB1P12018 145 aa8.19□□□□□ -1.1
COL4A6-204ENST00000461897 DSCR8Q96T75 97 aa8.19□□□□□ -1.1
COL4A6-204ENST00000461897 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
COL4A6-204ENST00000461897 COX7BP24311 80 aa8.19□□□□□ -1.1
COL4A6-204ENST00000461897 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
COL4A6-204ENST00000461897 F8WDY8 70 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
COL4A6-204ENST00000461897 CXCL6P80162 114 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 Q6ZVQ6 151 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 DNAH10Q8IVF4 4471 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 M0R2N4 97 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 M0R378 163 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 C1orf43Q9BWL3 253 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 APLNQ9ULZ1 77 aa8.17□□□□□ -1.1
COL4A6-204ENST00000461897 CAMK2N2Q96S95 79 aa8.15□□□□□ -1.1
COL4A6-204ENST00000461897 VPS13DQ5THJ4 4388 aa8.15□□□□□ -1.1
COL4A6-204ENST00000461897 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.11
COL4A6-204ENST00000461897 C15orf56Q8N910 161 aa8.15□□□□□ -1.11
COL4A6-204ENST00000461897 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
COL4A6-204ENST00000461897 DPH3Q96FX2 82 aa8.14□□□□□ -1.11
COL4A6-204ENST00000461897 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
COL4A6-204ENST00000461897 LOC107984640A0A0U1RRK4 108 aa8.13□□□□□ -1.11
COL4A6-204ENST00000461897 Q6ZRU5 148 aa8.13□□□□□ -1.11
COL4A6-204ENST00000461897 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
COL4A6-204ENST00000461897 HIGD2BQ4VC39 106 aa8.13□□□□□ -1.11
COL4A6-204ENST00000461897 FBN3Q75N90 2809 aa8.12□□□□□ -1.11
COL4A6-204ENST00000461897 NUPR2A6NF83 97 aa8.12□□□□□ -1.11
COL4A6-204ENST00000461897 HAMPP81172 84 aa8.11□□□□□ -1.11
COL4A6-204ENST00000461897 KRTAP1-5Q9BYS1 174 aa8.11□□□□□ -1.11
COL4A6-204ENST00000461897 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-204ENST00000461897 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
COL4A6-204ENST00000461897 UBE2DNLQ8IWF7 75 aa8.09□□□□□ -1.11
COL4A6-204ENST00000461897 KLKP1Q107X0 134 aa8.08□□□□□ -1.12
COL4A6-204ENST00000461897 Q6ZRP5 223 aa8.07□□□□□ -1.12
COL4A6-204ENST00000461897 C20orf197Q8N268 126 aa8.07□□□□□ -1.12
COL4A6-204ENST00000461897 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
COL4A6-204ENST00000461897 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
COL4A6-204ENST00000461897 RMI2Q96E14 147 aa8.06□□□□□ -1.12
COL4A6-204ENST00000461897 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
COL4A6-204ENST00000461897 OXTP01178 125 aa8.05□□□□□ -1.12
COL4A6-204ENST00000461897 SYCNQ0VAF6 134 aa8.05□□□□□ -1.12
COL4A6-204ENST00000461897 H7BZZ5 65 aa8.04□□□□□ -1.12
COL4A6-204ENST00000461897 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
COL4A6-204ENST00000461897 A0A1B0GW54 56 aa8.02□□□□□ -1.12
COL4A6-204ENST00000461897 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
COL4A6-204ENST00000461897 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
COL4A6-204ENST00000461897 FAM236DA0A1B0GTK5 79 aa8.02□□□□□ -1.13
COL4A6-204ENST00000461897 FAM236CP0DP71 79 aa8.02□□□□□ -1.13
COL4A6-204ENST00000461897 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
COL4A6-204ENST00000461897 KMT2AQ03164 3969 aa8□□□□□ -1.13
COL4A6-204ENST00000461897 ERC2-IT1O76042 136 aa8□□□□□ -1.13
COL4A6-204ENST00000461897 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
COL4A6-204ENST00000461897 TGP01266 2768 aa8□□□□□ -1.13
COL4A6-204ENST00000461897 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
COL4A6-204ENST00000461897 SERTAD4-AS1Q5TG53 156 aa8□□□□□ -1.13
COL4A6-204ENST00000461897 Q8N377 158 aa8□□□□□ -1.13
COL4A6-204ENST00000461897 DNAH2Q9P225 4427 aa7.99□□□□□ -1.13
COL4A6-204ENST00000461897 NBDYA0A0U1RRE5 68 aa7.99□□□□□ -1.13
COL4A6-204ENST00000461897 NDUFC1O43677 76 aa7.99□□□□□ -1.13
COL4A6-204ENST00000461897 SPRR1AP35321 89 aa7.99□□□□□ -1.13
COL4A6-204ENST00000461897 DHRS4-AS1Q9P1J3 65 aa7.99□□□□□ -1.13
COL4A6-204ENST00000461897 PRYO14603 147 aa7.98□□□□□ -1.13
COL4A6-204ENST00000461897 IGKV4-1P06312 121 aa7.98□□□□□ -1.13
COL4A6-204ENST00000461897 SCXQ7RTU7 201 aa7.98□□□□□ -1.13
COL4A6-204ENST00000461897 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
COL4A6-204ENST00000461897 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
COL4A6-204ENST00000461897 DNAH6Q9C0G6 4158 aa7.97□□□□□ -1.13
COL4A6-204ENST00000461897 Q6ZRX8 168 aa7.97□□□□□ -1.13
COL4A6-204ENST00000461897 TNP2Q05952 138 aa7.96□□□□□ -1.13
COL4A6-204ENST00000461897 NREPQ16612 68 aa7.96□□□□□ -1.13
COL4A6-204ENST00000461897 Q5XG85 94 aa7.96□□□□□ -1.13
COL4A6-204ENST00000461897 BPY2O14599 106 aa7.96□□□□□ -1.14
COL4A6-204ENST00000461897 PSCAO43653 123 aa7.96□□□□□ -1.14
COL4A6-204ENST00000461897 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
COL4A6-204ENST00000461897 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
COL4A6-204ENST00000461897 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
COL4A6-204ENST00000461897 Q9BRP9 147 aa7.94□□□□□ -1.14
COL4A6-204ENST00000461897 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
COL4A6-204ENST00000461897 SNURFQ9Y675 71 aa7.93□□□□□ -1.14
COL4A6-204ENST00000461897 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
COL4A6-204ENST00000461897 F8WEM9 126 aa7.92□□□□□ -1.14
COL4A6-204ENST00000461897 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
COL4A6-204ENST00000461897 TMEM254Q8TBM7 123 aa7.92□□□□□ -1.14
COL4A6-204ENST00000461897 A0A1W2PNM2 257 aa7.91□□□□□ -1.14
COL4A6-204ENST00000461897 LRCOL1A6NCL2 159 aa7.91□□□□□ -1.14
COL4A6-204ENST00000461897 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
COL4A6-204ENST00000461897 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
COL4A6-204ENST00000461897 WWC2-AS2Q96NR7 200 aa7.91□□□□□ -1.14
COL4A6-204ENST00000461897 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
COL4A6-204ENST00000461897 HYDINQ4G0P3 5121 aa7.91□□□□□ -1.14
COL4A6-204ENST00000461897 Q8N9L7 120 aa7.9□□□□□ -1.14
COL4A6-204ENST00000461897 DEFB105AQ8NG35 78 aa7.9□□□□□ -1.14
COL4A6-204ENST00000461897 DNAH17Q9UFH2 4485 aa7.9□□□□□ -1.14
COL4A6-204ENST00000461897 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms