RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 LIMD2Q9BT23 127 aa11.91□□□□□ -0.5
HMG20B-207ENST00000461099 C9orf92A6NGG3 77 aa11.9□□□□□ -0.5
HMG20B-207ENST00000461099 NMUP48645 174 aa11.89□□□□□ -0.51
HMG20B-207ENST00000461099 APOC3P02656 99 aa11.88□□□□□ -0.51
HMG20B-207ENST00000461099 PLNP26678 52 aa11.88□□□□□ -0.51
HMG20B-207ENST00000461099 HRCT1Q6UXD1 115 aa11.88□□□□□ -0.51
HMG20B-207ENST00000461099 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
HMG20B-207ENST00000461099 EIF4EBP3O60516 100 aaPredicted RBP11.86□□□□□ -0.51
HMG20B-207ENST00000461099 SNAPINO95295 136 aa11.86□□□□□ -0.51
HMG20B-207ENST00000461099 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
HMG20B-207ENST00000461099 LORP23490 312 aaPredicted RBP11.86□□□□□ -0.51
HMG20B-207ENST00000461099 SOSTDC1Q6X4U4 206 aa11.86□□□□□ -0.51
HMG20B-207ENST00000461099 YPEL4Q96NS1 127 aa11.86□□□□□ -0.51
HMG20B-207ENST00000461099 SPRR1BP22528 89 aa11.85□□□□□ -0.51
HMG20B-207ENST00000461099 HERVK_113P61574 105 aa11.85□□□□□ -0.51
HMG20B-207ENST00000461099 SLC25A34Q6PIV7 304 aa11.85□□□□□ -0.51
HMG20B-207ENST00000461099 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
HMG20B-207ENST00000461099 KRTAP10-6P60371 365 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-207ENST00000461099 NPC2P61916 151 aa11.84□□□□□ -0.51
HMG20B-207ENST00000461099 SVBPQ8N300 66 aa11.84□□□□□ -0.51
HMG20B-207ENST00000461099 CBY1Q9Y3M2 126 aa11.84□□□□□ -0.51
HMG20B-207ENST00000461099 ADAMTSL4-AS1Q5T5F5 129 aa11.83□□□□□ -0.52
HMG20B-207ENST00000461099 DPM2O94777 84 aa11.82□□□□□ -0.52
HMG20B-207ENST00000461099 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
HMG20B-207ENST00000461099 NDUFA5Q16718 116 aa11.8□□□□□ -0.52
HMG20B-207ENST00000461099 PMCHL2Q9BQD1 86 aa11.8□□□□□ -0.52
HMG20B-207ENST00000461099 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
HMG20B-207ENST00000461099 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
HMG20B-207ENST00000461099 IGKCP01834 107 aa11.79□□□□□ -0.52
HMG20B-207ENST00000461099 CD164Q04900 197 aa11.77□□□□□ -0.53
HMG20B-207ENST00000461099 HSPB8Q9UJY1 196 aa11.77□□□□□ -0.53
HMG20B-207ENST00000461099 SERF1AO75920 110 aa11.76□□□□□ -0.53
HMG20B-207ENST00000461099 LINC00310P59036 64 aa11.76□□□□□ -0.53
HMG20B-207ENST00000461099 OR13C6PQ8NH95 151 aa11.76□□□□□ -0.53
HMG20B-207ENST00000461099 M0R2T5 61 aa11.75□□□□□ -0.53
HMG20B-207ENST00000461099 FABP4P15090 132 aa11.74□□□□□ -0.53
HMG20B-207ENST00000461099 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
HMG20B-207ENST00000461099 Q1RN00 199 aa11.72□□□□□ -0.53
HMG20B-207ENST00000461099 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
HMG20B-207ENST00000461099 E9PLD3 99 aa11.71□□□□□ -0.53
HMG20B-207ENST00000461099 H7C2G1 150 aa11.71□□□□□ -0.53
HMG20B-207ENST00000461099 TRGC2P03986 189 aa11.71□□□□□ -0.53
HMG20B-207ENST00000461099 TAL2Q16559 108 aa11.71□□□□□ -0.53
HMG20B-207ENST00000461099 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
HMG20B-207ENST00000461099 Q5XG85 94 aa11.7□□□□□ -0.54
HMG20B-207ENST00000461099 DEFB105AQ8NG35 78 aa11.7□□□□□ -0.54
HMG20B-207ENST00000461099 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
HMG20B-207ENST00000461099 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
HMG20B-207ENST00000461099 LITAFQ99732 161 aa11.69□□□□□ -0.54
HMG20B-207ENST00000461099 COX7BP24311 80 aa11.68□□□□□ -0.54
HMG20B-207ENST00000461099 COX6B2Q6YFQ2 88 aa11.68□□□□□ -0.54
HMG20B-207ENST00000461099 SPANXDQ9BXN6 97 aa11.68□□□□□ -0.54
HMG20B-207ENST00000461099 TEX49A0A1B0GTD5 131 aa11.67□□□□□ -0.54
HMG20B-207ENST00000461099 RPL37P61927 97 aaKnown RBP11.67□□□□□ -0.54
HMG20B-207ENST00000461099 AKR1D1P51857 326 aa11.66□□□□□ -0.54
HMG20B-207ENST00000461099 C6orf99Q4VX62 202 aa11.66□□□□□ -0.54
HMG20B-207ENST00000461099 FLGP20930 4061 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-207ENST00000461099 TIMM17BO60830 172 aa11.64□□□□□ -0.55
HMG20B-207ENST00000461099 SMIM29Q86T20 159 aa11.63□□□□□ -0.55
HMG20B-207ENST00000461099 LINC00518Q8N0U6 118 aa11.61□□□□□ -0.55
HMG20B-207ENST00000461099 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
HMG20B-207ENST00000461099 TRBV7-6A0A0J9YX20 115 aa11.58□□□□□ -0.56
HMG20B-207ENST00000461099 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
HMG20B-207ENST00000461099 ZNF815PA8K554 130 aa11.55□□□□□ -0.56
HMG20B-207ENST00000461099 SYS1-DBNDD2H3BUS1 97 aa11.54□□□□□ -0.56
HMG20B-207ENST00000461099 A0A1B0GWB2 263 aa11.53□□□□□ -0.56
HMG20B-207ENST00000461099 TCL1BO95988 128 aa11.52□□□□□ -0.57
HMG20B-207ENST00000461099 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
HMG20B-207ENST00000461099 LINC01545Q5VT33 79 aa11.48□□□□□ -0.57
HMG20B-207ENST00000461099 A6NDN8 102 aa11.45□□□□□ -0.58
HMG20B-207ENST00000461099 A4D1N5 150 aa11.44□□□□□ -0.58
HMG20B-207ENST00000461099 COLCA2A8K830 154 aa11.44□□□□□ -0.58
HMG20B-207ENST00000461099 Q6Q795 121 aa11.44□□□□□ -0.58
HMG20B-207ENST00000461099 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
HMG20B-207ENST00000461099 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
HMG20B-207ENST00000461099 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
HMG20B-207ENST00000461099 NHP2Q9NX24 153 aaKnown RBP11.42□□□□□ -0.58
HMG20B-207ENST00000461099 IFITM1P13164 125 aa11.4□□□□□ -0.58
HMG20B-207ENST00000461099 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
HMG20B-207ENST00000461099 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
HMG20B-207ENST00000461099 KRTAP9-7A8MTY7 169 aa11.38□□□□□ -0.59
HMG20B-207ENST00000461099 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.38□□□□□ -0.59
HMG20B-207ENST00000461099 F8WEM9 126 aa11.38□□□□□ -0.59
HMG20B-207ENST00000461099 Q75L30 129 aa11.37□□□□□ -0.59
HMG20B-207ENST00000461099 Q6ZVH6 145 aa11.36□□□□□ -0.59
HMG20B-207ENST00000461099 SMIM11BQ8TCY0 68 aa11.36□□□□□ -0.59
HMG20B-207ENST00000461099 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
HMG20B-207ENST00000461099 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BKO60814 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BJP06899 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BOP23527 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BBP33778 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BDP58876 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BCP62807 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST2H2BEQ16778 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BHQ93079 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BNQ99877 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 HIST1H2BMQ99879 126 aa11.34□□□□□ -0.59
HMG20B-207ENST00000461099 TRAV13-2A0A0B4J235 113 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms