RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 TMEM256-PLSCR3K7ERE1 68 aa7.13□□□□□ -1.27
NEDD9-206ENST00000461055 INAFM2P0DMQ5 153 aa7.13□□□□□ -1.27
NEDD9-206ENST00000461055 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
NEDD9-206ENST00000461055 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
NEDD9-206ENST00000461055 hADV29S1A0JD25 119 aa7.12□□□□□ -1.27
NEDD9-206ENST00000461055 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
NEDD9-206ENST00000461055 COX7BP24311 80 aa7.12□□□□□ -1.27
NEDD9-206ENST00000461055 GAGE2BQ13066 116 aa7.12□□□□□ -1.27
NEDD9-206ENST00000461055 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-206ENST00000461055 VPS25Q9BRG1 176 aa7.12□□□□□ -1.27
NEDD9-206ENST00000461055 Q6ZR54 194 aa7.11□□□□□ -1.27
NEDD9-206ENST00000461055 PRYO14603 147 aa7.1□□□□□ -1.27
NEDD9-206ENST00000461055 ELOF1P60002 83 aaKnown RBP7.1□□□□□ -1.27
NEDD9-206ENST00000461055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-206ENST00000461055 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
NEDD9-206ENST00000461055 JMJD7-PLA2G4BH0Y9G9 81 aa7.09□□□□□ -1.27
NEDD9-206ENST00000461055 ACYP1P07311 99 aa7.09□□□□□ -1.27
NEDD9-206ENST00000461055 C7orf33Q8WU49 177 aa7.09□□□□□ -1.27
NEDD9-206ENST00000461055 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
NEDD9-206ENST00000461055 FAM240AA0A1B0GVK7 77 aa7.08□□□□□ -1.28
NEDD9-206ENST00000461055 C21orf62-AS1Q17RA5 79 aa7.08□□□□□ -1.28
NEDD9-206ENST00000461055 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
NEDD9-206ENST00000461055 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
NEDD9-206ENST00000461055 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
NEDD9-206ENST00000461055 DNAH17Q9UFH2 4485 aa7.08□□□□□ -1.28
NEDD9-206ENST00000461055 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
NEDD9-206ENST00000461055 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
NEDD9-206ENST00000461055 DYNC1H1Q14204 4646 aaKnown RBP7.07□□□□□ -1.28
NEDD9-206ENST00000461055 IGLV1-50A0A075B6I6 118 aa7.07□□□□□ -1.28
NEDD9-206ENST00000461055 C1orf134Q5TEV5 83 aa7.07□□□□□ -1.28
NEDD9-206ENST00000461055 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
NEDD9-206ENST00000461055 A0A087WTM6 91 aa7.06□□□□□ -1.28
NEDD9-206ENST00000461055 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
NEDD9-206ENST00000461055 OBSCN-AS1Q96MR7 158 aa7.06□□□□□ -1.28
NEDD9-206ENST00000461055 DHRS4-AS1Q9P1J3 65 aa7.06□□□□□ -1.28
NEDD9-206ENST00000461055 DNAH6Q9C0G6 4158 aa7.05□□□□□ -1.28
NEDD9-206ENST00000461055 SPRR1AP35321 89 aa7.05□□□□□ -1.28
NEDD9-206ENST00000461055 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-206ENST00000461055 A0A096LNI7 61 aa7.04□□□□□ -1.28
NEDD9-206ENST00000461055 M0R2N4 97 aa7.04□□□□□ -1.28
NEDD9-206ENST00000461055 SDIM1Q6ZPB5 146 aa7.04□□□□□ -1.28
NEDD9-206ENST00000461055 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
NEDD9-206ENST00000461055 PDE6GP18545 87 aa7.03□□□□□ -1.28
NEDD9-206ENST00000461055 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-206ENST00000461055 PKHD1P08F94 4074 aa7.03□□□□□ -1.28
NEDD9-206ENST00000461055 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
NEDD9-206ENST00000461055 FAM168BA1KXE4 195 aa7.02□□□□□ -1.29
NEDD9-206ENST00000461055 Q6ZQY7 126 aa7.02□□□□□ -1.29
NEDD9-206ENST00000461055 SIGMAR1Q99720 223 aa7.02□□□□□ -1.29
NEDD9-206ENST00000461055 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
NEDD9-206ENST00000461055 KRTAP4-16G5E9R7 235 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-206ENST00000461055 REG3GQ6UW15 175 aa7.01□□□□□ -1.29
NEDD9-206ENST00000461055 Q6ZRX8 168 aa7.01□□□□□ -1.29
NEDD9-206ENST00000461055 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
NEDD9-206ENST00000461055 B5MCH6 92 aa7□□□□□ -1.29
NEDD9-206ENST00000461055 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
NEDD9-206ENST00000461055 RPL37AP8A6NKH3 93 aa6.99□□□□□ -1.29
NEDD9-206ENST00000461055 EPM2AB3EWF7 344 aa6.99□□□□□ -1.29
NEDD9-206ENST00000461055 RBM3P98179 157 aaKnown RBP6.99□□□□□ -1.29
NEDD9-206ENST00000461055 CDIP1Q9H305 208 aa6.99□□□□□ -1.29
NEDD9-206ENST00000461055 PKD1P98161 4303 aa6.99□□□□□ -1.29
NEDD9-206ENST00000461055 H0Y9J4 135 aa6.98□□□□□ -1.29
NEDD9-206ENST00000461055 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
NEDD9-206ENST00000461055 LOC110117498A0A087WWA1 95 aa6.97□□□□□ -1.29
NEDD9-206ENST00000461055 CCKP06307 115 aa6.97□□□□□ -1.29
NEDD9-206ENST00000461055 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
NEDD9-206ENST00000461055 RTL8CO15255 209 aa6.96□□□□□ -1.3
NEDD9-206ENST00000461055 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
NEDD9-206ENST00000461055 DPH3Q96FX2 82 aa6.96□□□□□ -1.3
NEDD9-206ENST00000461055 DSCR8Q96T75 97 aa6.96□□□□□ -1.3
NEDD9-206ENST00000461055 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
NEDD9-206ENST00000461055 SCGB1A1P11684 91 aa6.95□□□□□ -1.3
NEDD9-206ENST00000461055 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
NEDD9-206ENST00000461055 UBE2BP63146 152 aa6.95□□□□□ -1.3
NEDD9-206ENST00000461055 GAGE2AQ6NT46 116 aa6.95□□□□□ -1.3
NEDD9-206ENST00000461055 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
NEDD9-206ENST00000461055 IGLV5-48A0A075B6I7 105 aa6.93□□□□□ -1.3
NEDD9-206ENST00000461055 A0A1B0GVY2 172 aa6.93□□□□□ -1.3
NEDD9-206ENST00000461055 CHTF8P0CG12 524 aa6.93□□□□□ -1.3
NEDD9-206ENST00000461055 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
NEDD9-206ENST00000461055 Q9BRP9 147 aa6.92□□□□□ -1.3
NEDD9-206ENST00000461055 HSPG2P98160 4391 aa6.92□□□□□ -1.3
NEDD9-206ENST00000461055 A0A1B0GW54 56 aa6.91□□□□□ -1.3
NEDD9-206ENST00000461055 Q6ZQT0 140 aa6.91□□□□□ -1.3
NEDD9-206ENST00000461055 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
NEDD9-206ENST00000461055 FAM19A1Q7Z5A9 133 aa6.91□□□□□ -1.3
NEDD9-206ENST00000461055 PLAC8Q9NZF1 115 aa6.91□□□□□ -1.3
NEDD9-206ENST00000461055 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.3
NEDD9-206ENST00000461055 BCE1O60756 84 aa6.9□□□□□ -1.3
NEDD9-206ENST00000461055 XGP55808 180 aa6.9□□□□□ -1.3
NEDD9-206ENST00000461055 Q6Q795 121 aa6.9□□□□□ -1.3
NEDD9-206ENST00000461055 Q8N377 158 aa6.9□□□□□ -1.3
NEDD9-206ENST00000461055 IMUPQ9GZP8 106 aa6.9□□□□□ -1.3
NEDD9-206ENST00000461055 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
NEDD9-206ENST00000461055 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
NEDD9-206ENST00000461055 UBE2AP49459 152 aa6.88□□□□□ -1.31
NEDD9-206ENST00000461055 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-206ENST00000461055 TNP2Q05952 138 aa6.88□□□□□ -1.31
NEDD9-206ENST00000461055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-206ENST00000461055 J3QL48 77 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms