RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SMIM26A0A096LP01 95 aa10.56□□□□□ -0.72
CMTM3-203ENST00000460097 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
CMTM3-203ENST00000460097 LAMTOR3Q9UHA4 124 aa10.55□□□□□ -0.72
CMTM3-203ENST00000460097 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
CMTM3-203ENST00000460097 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
CMTM3-203ENST00000460097 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
CMTM3-203ENST00000460097 TRBV7-4A0A0J9YYF1 115 aa10.54□□□□□ -0.72
CMTM3-203ENST00000460097 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.54□□□□□ -0.72
CMTM3-203ENST00000460097 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
CMTM3-203ENST00000460097 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
CMTM3-203ENST00000460097 KMT2CQ8NEZ4 4911 aaKnown RBP10.52□□□□□ -0.73
CMTM3-203ENST00000460097 Q8NDZ9 215 aa10.52□□□□□ -0.73
CMTM3-203ENST00000460097 HAMPP81172 84 aa10.5□□□□□ -0.73
CMTM3-203ENST00000460097 LINC00269Q8N2A0 174 aa10.5□□□□□ -0.73
CMTM3-203ENST00000460097 REG3AQ06141 175 aa10.49□□□□□ -0.73
CMTM3-203ENST00000460097 LYSTQ99698 3801 aa10.49□□□□□ -0.73
CMTM3-203ENST00000460097 Q6ZQY7 126 aa10.48□□□□□ -0.73
CMTM3-203ENST00000460097 H3BNG1 76 aa10.47□□□□□ -0.73
CMTM3-203ENST00000460097 Q8N3U1 123 aa10.47□□□□□ -0.73
CMTM3-203ENST00000460097 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
CMTM3-203ENST00000460097 M0R2N4 97 aa10.47□□□□□ -0.73
CMTM3-203ENST00000460097 SACSQ9NZJ4 4579 aa10.46□□□□□ -0.74
CMTM3-203ENST00000460097 F8WEM9 126 aa10.46□□□□□ -0.74
CMTM3-203ENST00000460097 SPAG11BQ08648 103 aa10.46□□□□□ -0.74
CMTM3-203ENST00000460097 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.74
CMTM3-203ENST00000460097 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.74
CMTM3-203ENST00000460097 LCE6AA0A183 80 aa10.45□□□□□ -0.74
CMTM3-203ENST00000460097 LY6G6CO95867 125 aa10.45□□□□□ -0.74
CMTM3-203ENST00000460097 LINC00476Q8WZB0 136 aa10.45□□□□□ -0.74
CMTM3-203ENST00000460097 RMI2Q96E14 147 aa10.44□□□□□ -0.74
CMTM3-203ENST00000460097 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
CMTM3-203ENST00000460097 ANGP03950 147 aaKnown RBP10.43□□□□□ -0.74
CMTM3-203ENST00000460097 COX7BP24311 80 aa10.43□□□□□ -0.74
CMTM3-203ENST00000460097 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
CMTM3-203ENST00000460097 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 DNAH1Q9P2D7 4330 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 ALMS1Q8TCU4 4167 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 A0A096LPF7 62 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 NREPQ16612 68 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 SNURFQ9Y675 71 aa10.42□□□□□ -0.74
CMTM3-203ENST00000460097 ZNF73O43830 326 aaPredicted RBP10.41□□□□□ -0.74
CMTM3-203ENST00000460097 C10orf25Q5T742 122 aa10.41□□□□□ -0.74
CMTM3-203ENST00000460097 LINC00336Q6ZUF6 198 aa10.41□□□□□ -0.74
CMTM3-203ENST00000460097 VPS13DQ5THJ4 4388 aa10.4□□□□□ -0.74
CMTM3-203ENST00000460097 HYDINQ4G0P3 5121 aa10.4□□□□□ -0.74
CMTM3-203ENST00000460097 A0A1B0GW54 56 aa10.39□□□□□ -0.75
CMTM3-203ENST00000460097 UBE2DNLQ8IWF7 75 aa10.39□□□□□ -0.75
CMTM3-203ENST00000460097 TMEM254Q8TBM7 123 aa10.39□□□□□ -0.75
CMTM3-203ENST00000460097 BPY2O14599 106 aa10.39□□□□□ -0.75
CMTM3-203ENST00000460097 LELP1Q5T871 98 aa10.39□□□□□ -0.75
CMTM3-203ENST00000460097 RYR2Q92736 4967 aa10.38□□□□□ -0.75
CMTM3-203ENST00000460097 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
CMTM3-203ENST00000460097 ESRGQ1W209 222 aa10.37□□□□□ -0.75
CMTM3-203ENST00000460097 RYR3Q15413 4870 aa10.37□□□□□ -0.75
CMTM3-203ENST00000460097 LINC00588Q9Y4M8 146 aa10.37□□□□□ -0.75
CMTM3-203ENST00000460097 KMT2AQ03164 3969 aa10.36□□□□□ -0.75
CMTM3-203ENST00000460097 A0A0U1RQV1 116 aa10.35□□□□□ -0.75
CMTM3-203ENST00000460097 OCR1Q9BZK8 76 aa10.35□□□□□ -0.75
CMTM3-203ENST00000460097 M0R378 163 aa10.34□□□□□ -0.75
CMTM3-203ENST00000460097 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
CMTM3-203ENST00000460097 IGKV4-1P06312 121 aa10.34□□□□□ -0.75
CMTM3-203ENST00000460097 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
CMTM3-203ENST00000460097 VPREB1P12018 145 aa10.33□□□□□ -0.76
CMTM3-203ENST00000460097 PRYO14603 147 aa10.31□□□□□ -0.76
CMTM3-203ENST00000460097 F8WDY8 70 aa10.31□□□□□ -0.76
CMTM3-203ENST00000460097 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
CMTM3-203ENST00000460097 DNAH6Q9C0G6 4158 aa10.28□□□□□ -0.76
CMTM3-203ENST00000460097 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.77
CMTM3-203ENST00000460097 IGLV5-48A0A075B6I7 105 aa10.26□□□□□ -0.77
CMTM3-203ENST00000460097 HIGD2BQ4VC39 106 aa10.26□□□□□ -0.77
CMTM3-203ENST00000460097 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
CMTM3-203ENST00000460097 LINC00474Q9P2X8 69 aa10.25□□□□□ -0.77
CMTM3-203ENST00000460097 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
CMTM3-203ENST00000460097 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
CMTM3-203ENST00000460097 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
CMTM3-203ENST00000460097 Q6ZR54 194 aa10.22□□□□□ -0.77
CMTM3-203ENST00000460097 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
CMTM3-203ENST00000460097 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.77
CMTM3-203ENST00000460097 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.78
CMTM3-203ENST00000460097 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.78
CMTM3-203ENST00000460097 DNAH10OSP0CZ25 163 aa10.2□□□□□ -0.78
CMTM3-203ENST00000460097 DNAH2Q9P225 4427 aa10.19□□□□□ -0.78
CMTM3-203ENST00000460097 LINC01556Q5JQF7 62 aa10.18□□□□□ -0.78
CMTM3-203ENST00000460097 FAM229BQ4G0N7 80 aa10.17□□□□□ -0.78
CMTM3-203ENST00000460097 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
CMTM3-203ENST00000460097 C1orf134Q5TEV5 83 aa10.16□□□□□ -0.78
CMTM3-203ENST00000460097 Q8N9L7 120 aa10.16□□□□□ -0.78
CMTM3-203ENST00000460097 DHRS4-AS1Q9P1J3 65 aa10.16□□□□□ -0.78
CMTM3-203ENST00000460097 Q8N377 158 aa10.16□□□□□ -0.78
CMTM3-203ENST00000460097 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
CMTM3-203ENST00000460097 PLA2G2DQ9UNK4 145 aa10.16□□□□□ -0.78
CMTM3-203ENST00000460097 hDV103S1A0JD37 113 aa10.15□□□□□ -0.78
CMTM3-203ENST00000460097 Q6ZRU5 148 aa10.15□□□□□ -0.78
CMTM3-203ENST00000460097 BRK1Q8WUW1 75 aa10.15□□□□□ -0.78
CMTM3-203ENST00000460097 DNAH10Q8IVF4 4471 aa10.15□□□□□ -0.78
CMTM3-203ENST00000460097 TNP2Q05952 138 aa10.14□□□□□ -0.79
CMTM3-203ENST00000460097 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
CMTM3-203ENST00000460097 HIGD2AQ9BW72 106 aa10.14□□□□□ -0.79
CMTM3-203ENST00000460097 Q1T7F1 81 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms