RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CMYA5Q8N3K9 4069 aa5.85□□□□□ -1.47
HDAC3-202ENST00000459727 J3KT08 172 aa5.85□□□□□ -1.47
HDAC3-202ENST00000459727 PRYO14603 147 aa5.85□□□□□ -1.47
HDAC3-202ENST00000459727 Q6ZVQ6 151 aa5.85□□□□□ -1.47
HDAC3-202ENST00000459727 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
HDAC3-202ENST00000459727 RETNQ9HD89 108 aa5.85□□□□□ -1.47
HDAC3-202ENST00000459727 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.47
HDAC3-202ENST00000459727 LINC01547P58512 204 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-202ENST00000459727 A0A087WVE0 104 aa5.83□□□□□ -1.48
HDAC3-202ENST00000459727 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
HDAC3-202ENST00000459727 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
HDAC3-202ENST00000459727 PKIGQ9Y2B9 76 aa5.83□□□□□ -1.48
HDAC3-202ENST00000459727 HAMPP81172 84 aa5.82□□□□□ -1.48
HDAC3-202ENST00000459727 KRTAP24-1Q3LI83 254 aa5.82□□□□□ -1.48
HDAC3-202ENST00000459727 Q6ZRP5 223 aa5.82□□□□□ -1.48
HDAC3-202ENST00000459727 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
HDAC3-202ENST00000459727 MGAM2Q2M2H8 2515 aa5.81□□□□□ -1.48
HDAC3-202ENST00000459727 NOTCH1P46531 2555 aa5.8□□□□□ -1.48
HDAC3-202ENST00000459727 NDUFC1O43677 76 aa5.8□□□□□ -1.48
HDAC3-202ENST00000459727 FUSP35637 526 aaKnown RBP eCLIP5.8□□□□□ -1.48
HDAC3-202ENST00000459727 FAM19A1Q7Z5A9 133 aa5.8□□□□□ -1.48
HDAC3-202ENST00000459727 TM2D3Q9BRN9 247 aa5.8□□□□□ -1.48
HDAC3-202ENST00000459727 TENM1Q9UKZ4 2725 aa5.8□□□□□ -1.48
HDAC3-202ENST00000459727 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
HDAC3-202ENST00000459727 Q6ZRX8 168 aa5.79□□□□□ -1.48
HDAC3-202ENST00000459727 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
HDAC3-202ENST00000459727 RYR3Q15413 4870 aa5.79□□□□□ -1.48
HDAC3-202ENST00000459727 IGLV5-48A0A075B6I7 105 aa5.78□□□□□ -1.48
HDAC3-202ENST00000459727 ERC2-IT1O76042 136 aa5.78□□□□□ -1.48
HDAC3-202ENST00000459727 SPRR1AP35321 89 aa5.78□□□□□ -1.48
HDAC3-202ENST00000459727 NBEAL2Q6ZNJ1 2754 aa5.78□□□□□ -1.48
HDAC3-202ENST00000459727 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
HDAC3-202ENST00000459727 NREPQ16612 68 aa5.77□□□□□ -1.49
HDAC3-202ENST00000459727 LINC00588Q9Y4M8 146 aa5.77□□□□□ -1.49
HDAC3-202ENST00000459727 IGLV1-50A0A075B6I6 118 aa5.76□□□□□ -1.49
HDAC3-202ENST00000459727 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
HDAC3-202ENST00000459727 C14orf177Q52M58 125 aa5.76□□□□□ -1.49
HDAC3-202ENST00000459727 SERTAD4-AS1Q5TG53 156 aa5.75□□□□□ -1.49
HDAC3-202ENST00000459727 MRPL55Q7Z7F7 128 aaKnown RBP5.75□□□□□ -1.49
HDAC3-202ENST00000459727 KRTAP4-16G5E9R7 235 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-202ENST00000459727 BPY2O14599 106 aa5.74□□□□□ -1.49
HDAC3-202ENST00000459727 RPL37AP8A6NKH3 93 aa5.73□□□□□ -1.49
HDAC3-202ENST00000459727 F8WEM9 126 aa5.73□□□□□ -1.49
HDAC3-202ENST00000459727 M0R2N4 97 aa5.73□□□□□ -1.49
HDAC3-202ENST00000459727 C20orf197Q8N268 126 aa5.73□□□□□ -1.49
HDAC3-202ENST00000459727 Q8N377 158 aa5.73□□□□□ -1.49
HDAC3-202ENST00000459727 FAM236DA0A1B0GTK5 79 aa5.72□□□□□ -1.49
HDAC3-202ENST00000459727 FAM236CP0DP71 79 aa5.72□□□□□ -1.49
HDAC3-202ENST00000459727 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
HDAC3-202ENST00000459727 REG3GQ6UW15 175 aa5.72□□□□□ -1.49
HDAC3-202ENST00000459727 Q8NBF4 154 aa5.72□□□□□ -1.49
HDAC3-202ENST00000459727 DPH3Q96FX2 82 aa5.72□□□□□ -1.49
HDAC3-202ENST00000459727 TNP2Q05952 138 aa5.71□□□□□ -1.5
HDAC3-202ENST00000459727 C1orf137Q5JT78 98 aa5.71□□□□□ -1.5
HDAC3-202ENST00000459727 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
HDAC3-202ENST00000459727 UBE2BP63146 152 aa5.7□□□□□ -1.5
HDAC3-202ENST00000459727 DEFB105AQ8NG35 78 aa5.7□□□□□ -1.5
HDAC3-202ENST00000459727 SPRR4Q96PI1 79 aa5.7□□□□□ -1.5
HDAC3-202ENST00000459727 SERP1Q9Y6X1 66 aa5.7□□□□□ -1.5
HDAC3-202ENST00000459727 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
HDAC3-202ENST00000459727 Q9BRP9 147 aa5.69□□□□□ -1.5
HDAC3-202ENST00000459727 H7BZZ5 65 aa5.68□□□□□ -1.5
HDAC3-202ENST00000459727 K7EIL1 84 aa5.68□□□□□ -1.5
HDAC3-202ENST00000459727 PSCAO43653 123 aa5.68□□□□□ -1.5
HDAC3-202ENST00000459727 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-202ENST00000459727 LINC00474Q9P2X8 69 aa5.68□□□□□ -1.5
HDAC3-202ENST00000459727 H0Y9J4 135 aa5.67□□□□□ -1.5
HDAC3-202ENST00000459727 UBE2DNLQ8IWF7 75 aa5.67□□□□□ -1.5
HDAC3-202ENST00000459727 CYSTM1Q9H1C7 97 aa5.67□□□□□ -1.5
HDAC3-202ENST00000459727 IGLV8-61A0A075B6I0 122 aa5.66□□□□□ -1.5
HDAC3-202ENST00000459727 C3orf84H3BNL1 204 aa5.66□□□□□ -1.5
HDAC3-202ENST00000459727 SCXQ7RTU7 201 aa5.66□□□□□ -1.5
HDAC3-202ENST00000459727 TMEM254Q8TBM7 123 aa5.66□□□□□ -1.5
HDAC3-202ENST00000459727 VWFP04275 2813 aa5.65□□□□□ -1.5
HDAC3-202ENST00000459727 FAM168BA1KXE4 195 aa5.65□□□□□ -1.5
HDAC3-202ENST00000459727 A0A1W2PNM2 257 aa5.64□□□□□ -1.51
HDAC3-202ENST00000459727 CASC10Q5T4H9 136 aa5.64□□□□□ -1.51
HDAC3-202ENST00000459727 OCR1Q9BZK8 76 aa5.64□□□□□ -1.51
HDAC3-202ENST00000459727 NUPR2A6NF83 97 aa5.63□□□□□ -1.51
HDAC3-202ENST00000459727 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
HDAC3-202ENST00000459727 A0A096LNI7 61 aa5.62□□□□□ -1.51
HDAC3-202ENST00000459727 EPM2AB3EWF7 344 aa5.62□□□□□ -1.51
HDAC3-202ENST00000459727 SPRR1BP22528 89 aa5.62□□□□□ -1.51
HDAC3-202ENST00000459727 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
HDAC3-202ENST00000459727 LINC00476Q8WZB0 136 aa5.62□□□□□ -1.51
HDAC3-202ENST00000459727 A0A0U1RQV1 116 aa5.61□□□□□ -1.51
HDAC3-202ENST00000459727 C5orf47Q569G3 176 aa5.61□□□□□ -1.51
HDAC3-202ENST00000459727 APLNQ9ULZ1 77 aa5.61□□□□□ -1.51
HDAC3-202ENST00000459727 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
HDAC3-202ENST00000459727 LCE6AA0A183 80 aa5.6□□□□□ -1.51
HDAC3-202ENST00000459727 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
HDAC3-202ENST00000459727 B9D2Q9BPU9 175 aa5.6□□□□□ -1.51
HDAC3-202ENST00000459727 SNURFQ9Y675 71 aa5.6□□□□□ -1.51
HDAC3-202ENST00000459727 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.51
HDAC3-202ENST00000459727 UBE2AP49459 152 aa5.59□□□□□ -1.51
HDAC3-202ENST00000459727 Q8N9L7 120 aa5.59□□□□□ -1.51
HDAC3-202ENST00000459727 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.51
HDAC3-202ENST00000459727 IGKV2-24A0A0C4DH68 120 aa5.58□□□□□ -1.52
HDAC3-202ENST00000459727 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
HDAC3-202ENST00000459727 NDUFB1O75438 58 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms