RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.06□□□□□ -0.48
SEMA3B-209ENST00000456560 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
SEMA3B-209ENST00000456560 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
SEMA3B-209ENST00000456560 M0R2N4 97 aa12.05□□□□□ -0.48
SEMA3B-209ENST00000456560 C20orf197Q8N268 126 aa12.03□□□□□ -0.48
SEMA3B-209ENST00000456560 OXTP01178 125 aa12.03□□□□□ -0.48
SEMA3B-209ENST00000456560 C5orf47Q569G3 176 aa12.03□□□□□ -0.48
SEMA3B-209ENST00000456560 HAMPP81172 84 aa12.02□□□□□ -0.48
SEMA3B-209ENST00000456560 LINC01547P58512 204 aaPredicted RBP12.02□□□□□ -0.49
SEMA3B-209ENST00000456560 K7EIL1 84 aa12.01□□□□□ -0.49
SEMA3B-209ENST00000456560 Q6ZVQ6 151 aa12.01□□□□□ -0.49
SEMA3B-209ENST00000456560 LINC00528Q8N1L1 170 aa12.01□□□□□ -0.49
SEMA3B-209ENST00000456560 TLX1NBP0CAT3 122 aa11.99□□□□□ -0.49
SEMA3B-209ENST00000456560 PDE6GP18545 87 aa11.98□□□□□ -0.49
SEMA3B-209ENST00000456560 MRAPQ8TCY5 172 aa11.98□□□□□ -0.49
SEMA3B-209ENST00000456560 TRAV7A0A075B6U4 112 aa11.97□□□□□ -0.49
SEMA3B-209ENST00000456560 BCE1O60756 84 aa11.96□□□□□ -0.49
SEMA3B-209ENST00000456560 CASC10Q5T4H9 136 aa11.96□□□□□ -0.49
SEMA3B-209ENST00000456560 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
SEMA3B-209ENST00000456560 KCNQ1DNQ9H478 68 aa11.95□□□□□ -0.5
SEMA3B-209ENST00000456560 TRBV7-4A0A0J9YYF1 115 aa11.95□□□□□ -0.5
SEMA3B-209ENST00000456560 C7orf33Q8WU49 177 aa11.95□□□□□ -0.5
SEMA3B-209ENST00000456560 PLA2G2DQ9UNK4 145 aa11.95□□□□□ -0.5
SEMA3B-209ENST00000456560 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
SEMA3B-209ENST00000456560 FAM236DA0A1B0GTK5 79 aa11.93□□□□□ -0.5
SEMA3B-209ENST00000456560 FAM236CP0DP71 79 aa11.93□□□□□ -0.5
SEMA3B-209ENST00000456560 CXCL6P80162 114 aa11.93□□□□□ -0.5
SEMA3B-209ENST00000456560 RMI2Q96E14 147 aa11.92□□□□□ -0.5
SEMA3B-209ENST00000456560 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
SEMA3B-209ENST00000456560 IGLV5-37A0A075B6J1 123 aa11.9□□□□□ -0.5
SEMA3B-209ENST00000456560 C4orf26Q17RF5 130 aa11.9□□□□□ -0.5
SEMA3B-209ENST00000456560 KRTAP21-3Q3LHN1 58 aa11.9□□□□□ -0.51
SEMA3B-209ENST00000456560 H7BZZ5 65 aa11.89□□□□□ -0.51
SEMA3B-209ENST00000456560 Q5XG85 94 aa11.89□□□□□ -0.51
SEMA3B-209ENST00000456560 SCXQ7RTU7 201 aa11.89□□□□□ -0.51
SEMA3B-209ENST00000456560 DNAH1Q9P2D7 4330 aa11.89□□□□□ -0.51
SEMA3B-209ENST00000456560 SNURFQ9Y675 71 aa11.87□□□□□ -0.51
SEMA3B-209ENST00000456560 FAM168BA1KXE4 195 aa11.86□□□□□ -0.51
SEMA3B-209ENST00000456560 KLKP1Q107X0 134 aa11.86□□□□□ -0.51
SEMA3B-209ENST00000456560 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
SEMA3B-209ENST00000456560 HRCT1Q6UXD1 115 aa11.85□□□□□ -0.51
SEMA3B-209ENST00000456560 IGLV1-50A0A075B6I6 118 aa11.84□□□□□ -0.51
SEMA3B-209ENST00000456560 KRTAP4-16G5E9R7 235 aaPredicted RBP11.84□□□□□ -0.51
SEMA3B-209ENST00000456560 MEGF8Q7Z7M0 2845 aa11.84□□□□□ -0.51
SEMA3B-209ENST00000456560 DNAH9Q9NYC9 4486 aa11.83□□□□□ -0.52
SEMA3B-209ENST00000456560 SERP1Q9Y6X1 66 aa11.83□□□□□ -0.52
SEMA3B-209ENST00000456560 COL7A1Q02388 2944 aa11.83□□□□□ -0.52
SEMA3B-209ENST00000456560 PRYO14603 147 aa11.83□□□□□ -0.52
SEMA3B-209ENST00000456560 SPRR1AP35321 89 aa11.83□□□□□ -0.52
SEMA3B-209ENST00000456560 RPL37AP8A6NKH3 93 aa11.82□□□□□ -0.52
SEMA3B-209ENST00000456560 Q8N377 158 aa11.81□□□□□ -0.52
SEMA3B-209ENST00000456560 Q6ZRX8 168 aa11.8□□□□□ -0.52
SEMA3B-209ENST00000456560 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
SEMA3B-209ENST00000456560 PRKDCP78527 4128 aaKnown RBP11.8□□□□□ -0.52
SEMA3B-209ENST00000456560 F8WEM9 126 aa11.8□□□□□ -0.52
SEMA3B-209ENST00000456560 Q9BRP9 147 aa11.79□□□□□ -0.52
SEMA3B-209ENST00000456560 EPM2AB3EWF7 344 aa11.78□□□□□ -0.52
SEMA3B-209ENST00000456560 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
SEMA3B-209ENST00000456560 MRPL55Q7Z7F7 128 aaKnown RBP11.76□□□□□ -0.53
SEMA3B-209ENST00000456560 DEFB105AQ8NG35 78 aa11.76□□□□□ -0.53
SEMA3B-209ENST00000456560 ETDCA0A1B0GVM5 59 aa11.76□□□□□ -0.53
SEMA3B-209ENST00000456560 NREPQ16612 68 aa11.76□□□□□ -0.53
SEMA3B-209ENST00000456560 IGLV5-48A0A075B6I7 105 aa11.75□□□□□ -0.53
SEMA3B-209ENST00000456560 BPY2O14599 106 aa11.75□□□□□ -0.53
SEMA3B-209ENST00000456560 NDUFC1O43677 76 aa11.74□□□□□ -0.53
SEMA3B-209ENST00000456560 Q8N9L7 120 aa11.74□□□□□ -0.53
SEMA3B-209ENST00000456560 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
SEMA3B-209ENST00000456560 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
SEMA3B-209ENST00000456560 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
SEMA3B-209ENST00000456560 CNBPP62633 177 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-209ENST00000456560 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
SEMA3B-209ENST00000456560 IGKV4-1P06312 121 aa11.7□□□□□ -0.54
SEMA3B-209ENST00000456560 TNP2Q05952 138 aa11.7□□□□□ -0.54
SEMA3B-209ENST00000456560 TMEM254Q8TBM7 123 aa11.69□□□□□ -0.54
SEMA3B-209ENST00000456560 ERC2-IT1O76042 136 aa11.68□□□□□ -0.54
SEMA3B-209ENST00000456560 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
SEMA3B-209ENST00000456560 REG3GQ6UW15 175 aa11.68□□□□□ -0.54
SEMA3B-209ENST00000456560 A0A096LNI7 61 aa11.67□□□□□ -0.54
SEMA3B-209ENST00000456560 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
SEMA3B-209ENST00000456560 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
SEMA3B-209ENST00000456560 UBE2DNLQ8IWF7 75 aa11.66□□□□□ -0.54
SEMA3B-209ENST00000456560 ATP5EP56381 51 aaPredicted RBP11.65□□□□□ -0.54
SEMA3B-209ENST00000456560 PSCAO43653 123 aa11.64□□□□□ -0.55
SEMA3B-209ENST00000456560 UBE2BP63146 152 aa11.64□□□□□ -0.55
SEMA3B-209ENST00000456560 FBN3Q75N90 2809 aa11.63□□□□□ -0.55
SEMA3B-209ENST00000456560 A0A1B0GW54 56 aa11.63□□□□□ -0.55
SEMA3B-209ENST00000456560 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
SEMA3B-209ENST00000456560 A0A1W2PNN7 141 aa11.63□□□□□ -0.55
SEMA3B-209ENST00000456560 FP248Q71RG6 208 aaPredicted RBP11.63□□□□□ -0.55
SEMA3B-209ENST00000456560 DYNC2H1Q8NCM8 4307 aaKnown RBP11.63□□□□□ -0.55
SEMA3B-209ENST00000456560 OCR1Q9BZK8 76 aa11.62□□□□□ -0.55
SEMA3B-209ENST00000456560 C1orf137Q5JT78 98 aa11.62□□□□□ -0.55
SEMA3B-209ENST00000456560 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
SEMA3B-209ENST00000456560 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.55
SEMA3B-209ENST00000456560 C14orf177Q52M58 125 aa11.6□□□□□ -0.55
SEMA3B-209ENST00000456560 SMIM29Q86T20 159 aa11.6□□□□□ -0.55
SEMA3B-209ENST00000456560 DNAH10Q8IVF4 4471 aa11.59□□□□□ -0.55
SEMA3B-209ENST00000456560 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
SEMA3B-209ENST00000456560 Q8NBF4 154 aa11.59□□□□□ -0.55
SEMA3B-209ENST00000456560 LINC00474Q9P2X8 69 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms