RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
LMCD1-206ENST00000456506 M0R378 163 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 LCE2BO14633 110 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
LMCD1-206ENST00000456506 DDTP30046 118 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 TTTY13Q9BZ97 58 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 NDUFA12Q9UI09 145 aa6.75□□□□□ -1.33
LMCD1-206ENST00000456506 ZNF815PA8K554 130 aa6.74□□□□□ -1.33
LMCD1-206ENST00000456506 HERV-K104P63124 156 aa6.74□□□□□ -1.33
LMCD1-206ENST00000456506 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
LMCD1-206ENST00000456506 TIMM17BO60830 172 aa6.73□□□□□ -1.33
LMCD1-206ENST00000456506 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
LMCD1-206ENST00000456506 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
LMCD1-206ENST00000456506 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
LMCD1-206ENST00000456506 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
LMCD1-206ENST00000456506 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
LMCD1-206ENST00000456506 TAL2Q16559 108 aa6.71□□□□□ -1.34
LMCD1-206ENST00000456506 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
LMCD1-206ENST00000456506 PFN2P35080 140 aa6.7□□□□□ -1.34
LMCD1-206ENST00000456506 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
LMCD1-206ENST00000456506 Q6ZVH6 145 aa6.7□□□□□ -1.34
LMCD1-206ENST00000456506 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
LMCD1-206ENST00000456506 LITAFQ99732 161 aa6.7□□□□□ -1.34
LMCD1-206ENST00000456506 HSD52Q0P140 79 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 SCGB1D4Q6XE38 83 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 SPANXDQ9BXN6 97 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 ERG28Q9UKR5 140 aa6.68□□□□□ -1.34
LMCD1-206ENST00000456506 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
LMCD1-206ENST00000456506 COX17Q14061 63 aa6.67□□□□□ -1.34
LMCD1-206ENST00000456506 LOC107984156A0A0G2JMH3 177 aa6.66□□□□□ -1.34
LMCD1-206ENST00000456506 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
LMCD1-206ENST00000456506 RPL24P83731 157 aaKnown RBP6.66□□□□□ -1.34
LMCD1-206ENST00000456506 ARL17AQ8IVW1 177 aa6.66□□□□□ -1.34
LMCD1-206ENST00000456506 DAND5Q8N907 189 aa6.66□□□□□ -1.34
LMCD1-206ENST00000456506 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
LMCD1-206ENST00000456506 IFITM1P13164 125 aa6.65□□□□□ -1.34
LMCD1-206ENST00000456506 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
LMCD1-206ENST00000456506 ADAMTSL4-AS1Q5T5F5 129 aa6.65□□□□□ -1.34
LMCD1-206ENST00000456506 Q8NBF4 154 aa6.65□□□□□ -1.34
LMCD1-206ENST00000456506 KRTAP4-16G5E9R7 235 aaPredicted RBP6.64□□□□□ -1.35
LMCD1-206ENST00000456506 M0R143 59 aa6.64□□□□□ -1.35
LMCD1-206ENST00000456506 SPRR1AP35321 89 aa6.64□□□□□ -1.35
LMCD1-206ENST00000456506 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
LMCD1-206ENST00000456506 CEND1Q8N111 149 aa6.64□□□□□ -1.35
LMCD1-206ENST00000456506 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
LMCD1-206ENST00000456506 LINC00337Q8N6G1 96 aa6.63□□□□□ -1.35
LMCD1-206ENST00000456506 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
LMCD1-206ENST00000456506 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
LMCD1-206ENST00000456506 LINC00483Q53H64 154 aa6.62□□□□□ -1.35
LMCD1-206ENST00000456506 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
LMCD1-206ENST00000456506 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
LMCD1-206ENST00000456506 SNHG12Q9BXW3 62 aa6.62□□□□□ -1.35
LMCD1-206ENST00000456506 SPINK1P00995 79 aa6.61□□□□□ -1.35
LMCD1-206ENST00000456506 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
LMCD1-206ENST00000456506 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
LMCD1-206ENST00000456506 Q8N377 158 aa6.61□□□□□ -1.35
LMCD1-206ENST00000456506 LINC00308Q8TCZ7 52 aa6.61□□□□□ -1.35
LMCD1-206ENST00000456506 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
LMCD1-206ENST00000456506 HINT1P49773 126 aaPredicted RBP6.6□□□□□ -1.35
LMCD1-206ENST00000456506 FXYD2P54710 66 aa6.6□□□□□ -1.35
LMCD1-206ENST00000456506 LINC00158P58513 81 aa6.6□□□□□ -1.35
LMCD1-206ENST00000456506 XP32Q5T750 250 aa6.6□□□□□ -1.35
LMCD1-206ENST00000456506 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
LMCD1-206ENST00000456506 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
LMCD1-206ENST00000456506 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
LMCD1-206ENST00000456506 A6NJY4 79 aa6.59□□□□□ -1.35
LMCD1-206ENST00000456506 PRYO14603 147 aa6.59□□□□□ -1.35
LMCD1-206ENST00000456506 RPS29P62273 56 aaKnown RBP6.59□□□□□ -1.35
LMCD1-206ENST00000456506 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
LMCD1-206ENST00000456506 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
LMCD1-206ENST00000456506 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
LMCD1-206ENST00000456506 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
LMCD1-206ENST00000456506 A4D1N5 150 aa6.57□□□□□ -1.36
LMCD1-206ENST00000456506 A6NDN8 102 aa6.57□□□□□ -1.36
LMCD1-206ENST00000456506 NDUFC2O95298 119 aa6.57□□□□□ -1.36
LMCD1-206ENST00000456506 MT1HP80294 61 aa6.57□□□□□ -1.36
LMCD1-206ENST00000456506 A0A0B4J2C4 111 aa6.56□□□□□ -1.36
LMCD1-206ENST00000456506 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
LMCD1-206ENST00000456506 CFC1BP0CG36 223 aa6.56□□□□□ -1.36
LMCD1-206ENST00000456506 CFC1P0CG37 223 aa6.56□□□□□ -1.36
LMCD1-206ENST00000456506 ERC2-IT1O76042 136 aa6.55□□□□□ -1.36
LMCD1-206ENST00000456506 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
LMCD1-206ENST00000456506 B5MCH6 92 aa6.54□□□□□ -1.36
LMCD1-206ENST00000456506 NCR3O14931 201 aa6.54□□□□□ -1.36
LMCD1-206ENST00000456506 MOBPQ13875 183 aa6.54□□□□□ -1.36
LMCD1-206ENST00000456506 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
LMCD1-206ENST00000456506 SSBP3-AS1Q7Z2R9 100 aa6.53□□□□□ -1.36
LMCD1-206ENST00000456506 Q9BRP9 147 aa6.53□□□□□ -1.36
LMCD1-206ENST00000456506 NHP2Q9NX24 153 aaKnown RBP6.53□□□□□ -1.36
LMCD1-206ENST00000456506 TRBV10-2A0A0K0K1G8 114 aa6.52□□□□□ -1.37
LMCD1-206ENST00000456506 TAX1BP3O14907 124 aa6.52□□□□□ -1.37
LMCD1-206ENST00000456506 BATFQ16520 125 aa6.52□□□□□ -1.37
LMCD1-206ENST00000456506 GAGE2AQ6NT46 116 aa6.52□□□□□ -1.37
LMCD1-206ENST00000456506 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms