RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PLNP26678 52 aa8.85□□□□□ -0.99
GPC1-206ENST00000455111 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
GPC1-206ENST00000455111 IGKCP01834 107 aa8.84□□□□□ -0.99
GPC1-206ENST00000455111 S100A1P23297 94 aa8.84□□□□□ -0.99
GPC1-206ENST00000455111 LITAFQ99732 161 aa8.84□□□□□ -0.99
GPC1-206ENST00000455111 NMUP48645 174 aa8.83□□□□□ -1
GPC1-206ENST00000455111 COLCA2A8K830 154 aa8.82□□□□□ -1
GPC1-206ENST00000455111 ZNF73O43830 326 aaPredicted RBP8.82□□□□□ -1
GPC1-206ENST00000455111 SLC25A20O43772 301 aa8.81□□□□□ -1
GPC1-206ENST00000455111 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
GPC1-206ENST00000455111 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
GPC1-206ENST00000455111 E9PLD3 99 aa8.8□□□□□ -1
GPC1-206ENST00000455111 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
GPC1-206ENST00000455111 HERVK_113P61574 105 aa8.79□□□□□ -1
GPC1-206ENST00000455111 S100A12P80511 92 aa8.79□□□□□ -1
GPC1-206ENST00000455111 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
GPC1-206ENST00000455111 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
GPC1-206ENST00000455111 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
GPC1-206ENST00000455111 SPRR1BP22528 89 aa8.78□□□□□ -1
GPC1-206ENST00000455111 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
GPC1-206ENST00000455111 LINC01547P58512 204 aaPredicted RBP8.77□□□□□ -1.01
GPC1-206ENST00000455111 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
GPC1-206ENST00000455111 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
GPC1-206ENST00000455111 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
GPC1-206ENST00000455111 HRCT1Q6UXD1 115 aa8.73□□□□□ -1.01
GPC1-206ENST00000455111 SYS1-DBNDD2H3BUS1 97 aa8.72□□□□□ -1.01
GPC1-206ENST00000455111 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
GPC1-206ENST00000455111 C5orf52A6NGY3 159 aa8.71□□□□□ -1.02
GPC1-206ENST00000455111 MT1HP80294 61 aa8.71□□□□□ -1.02
GPC1-206ENST00000455111 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
GPC1-206ENST00000455111 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
GPC1-206ENST00000455111 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BKO60814 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 TIMM17BO60830 172 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BJP06899 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BOP23527 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BBP33778 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BDP58876 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BCP62807 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST2H2BEQ16778 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BHQ93079 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BNQ99877 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 HIST1H2BMQ99879 126 aa8.69□□□□□ -1.02
GPC1-206ENST00000455111 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
GPC1-206ENST00000455111 OR13C6PQ8NH95 151 aa8.68□□□□□ -1.02
GPC1-206ENST00000455111 A0A0G2JQZ4 141 aa8.67□□□□□ -1.02
GPC1-206ENST00000455111 C6orf99Q4VX62 202 aa8.66□□□□□ -1.02
GPC1-206ENST00000455111 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
GPC1-206ENST00000455111 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
GPC1-206ENST00000455111 Q1RN00 199 aa8.65□□□□□ -1.02
GPC1-206ENST00000455111 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
GPC1-206ENST00000455111 COX7BP24311 80 aa8.64□□□□□ -1.03
GPC1-206ENST00000455111 CRCT1Q9UGL9 99 aa8.64□□□□□ -1.03
GPC1-206ENST00000455111 IGLV8-61A0A075B6I0 122 aa8.63□□□□□ -1.03
GPC1-206ENST00000455111 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
GPC1-206ENST00000455111 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
GPC1-206ENST00000455111 H7C2G1 150 aa8.62□□□□□ -1.03
GPC1-206ENST00000455111 HINT1P49773 126 aaPredicted RBP8.62□□□□□ -1.03
GPC1-206ENST00000455111 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
GPC1-206ENST00000455111 DEFB105AQ8NG35 78 aa8.62□□□□□ -1.03
GPC1-206ENST00000455111 LIMD2Q9BT23 127 aa8.62□□□□□ -1.03
GPC1-206ENST00000455111 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
GPC1-206ENST00000455111 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
GPC1-206ENST00000455111 C1orf195Q5TG92 126 aa8.6□□□□□ -1.03
GPC1-206ENST00000455111 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
GPC1-206ENST00000455111 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
GPC1-206ENST00000455111 CD164Q04900 197 aa8.59□□□□□ -1.03
GPC1-206ENST00000455111 CBY1Q9Y3M2 126 aa8.59□□□□□ -1.03
GPC1-206ENST00000455111 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
GPC1-206ENST00000455111 TAL2Q16559 108 aa8.58□□□□□ -1.04
GPC1-206ENST00000455111 Q5XG85 94 aa8.58□□□□□ -1.04
GPC1-206ENST00000455111 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
GPC1-206ENST00000455111 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
GPC1-206ENST00000455111 PRO1933Q9H354 126 aa8.57□□□□□ -1.04
GPC1-206ENST00000455111 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
GPC1-206ENST00000455111 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
GPC1-206ENST00000455111 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
GPC1-206ENST00000455111 PCP2Q8IVA1 136 aa8.54□□□□□ -1.04
GPC1-206ENST00000455111 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
GPC1-206ENST00000455111 KRTDAPP60985 99 aa8.53□□□□□ -1.04
GPC1-206ENST00000455111 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
GPC1-206ENST00000455111 A0A1B0GWB2 263 aa8.52□□□□□ -1.05
GPC1-206ENST00000455111 RPL37P61927 97 aaKnown RBP8.52□□□□□ -1.05
GPC1-206ENST00000455111 AKR1D1P51857 326 aa8.51□□□□□ -1.05
GPC1-206ENST00000455111 A6NDN8 102 aa8.5□□□□□ -1.05
GPC1-206ENST00000455111 SCGB1D4Q6XE38 83 aa8.5□□□□□ -1.05
GPC1-206ENST00000455111 SMIM11BQ8TCY0 68 aa8.5□□□□□ -1.05
GPC1-206ENST00000455111 IFITM1P13164 125 aa8.49□□□□□ -1.05
GPC1-206ENST00000455111 CFC1BP0CG36 223 aa8.46□□□□□ -1.06
GPC1-206ENST00000455111 Q6ZVH6 145 aa8.44□□□□□ -1.06
GPC1-206ENST00000455111 A4D1N5 150 aa8.41□□□□□ -1.06
GPC1-206ENST00000455111 LINC00575Q6W349 94 aa8.41□□□□□ -1.06
GPC1-206ENST00000455111 TRAV13-2A0A0B4J235 113 aa8.4□□□□□ -1.06
GPC1-206ENST00000455111 C20orf202A1L168 122 aa8.39□□□□□ -1.07
GPC1-206ENST00000455111 IGFL1Q6UW32 110 aa8.39□□□□□ -1.07
GPC1-206ENST00000455111 Q6ZQY7 126 aa8.38□□□□□ -1.07
GPC1-206ENST00000455111 COPS9Q8WXC6 57 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms