RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
CLK3-203ENST00000454830 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
CLK3-203ENST00000454830 CCKP06307 115 aa8.79□□□□□ -1
CLK3-203ENST00000454830 KCNQ1DNQ9H478 68 aa8.78□□□□□ -1
CLK3-203ENST00000454830 TGP01266 2768 aa8.78□□□□□ -1
CLK3-203ENST00000454830 SDIM1Q6ZPB5 146 aa8.78□□□□□ -1
CLK3-203ENST00000454830 OBSCN-AS1Q96MR7 158 aa8.78□□□□□ -1
CLK3-203ENST00000454830 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
CLK3-203ENST00000454830 TRBV7-6A0A0J9YX20 115 aa8.77□□□□□ -1.01
CLK3-203ENST00000454830 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
CLK3-203ENST00000454830 FUSP35637 526 aaKnown RBP eCLIP8.76□□□□□ -1.01
CLK3-203ENST00000454830 NDUFV3P56181 108 aaKnown RBP8.76□□□□□ -1.01
CLK3-203ENST00000454830 LYSTQ99698 3801 aa8.76□□□□□ -1.01
CLK3-203ENST00000454830 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
CLK3-203ENST00000454830 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
CLK3-203ENST00000454830 PRYO14603 147 aa8.75□□□□□ -1.01
CLK3-203ENST00000454830 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
CLK3-203ENST00000454830 LY6G6CO95867 125 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 FAM19A1Q7Z5A9 133 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 FAM236AA0A1B0GUQ0 79 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 FAM236BA0A1B0GV22 79 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 H3BQ85 93 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 C3orf22Q8N5N4 141 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 HIGD2AQ9BW72 106 aa8.74□□□□□ -1.01
CLK3-203ENST00000454830 Q6ZRX8 168 aa8.73□□□□□ -1.01
CLK3-203ENST00000454830 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
CLK3-203ENST00000454830 HAMPP81172 84 aa8.73□□□□□ -1.01
CLK3-203ENST00000454830 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
CLK3-203ENST00000454830 DNHD1Q96M86 4753 aa8.72□□□□□ -1.01
CLK3-203ENST00000454830 PRLHP81277 87 aa8.72□□□□□ -1.01
CLK3-203ENST00000454830 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
CLK3-203ENST00000454830 Q6ZQT0 140 aa8.72□□□□□ -1.01
CLK3-203ENST00000454830 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
CLK3-203ENST00000454830 CSMD3Q7Z407 3707 aa8.7□□□□□ -1.02
CLK3-203ENST00000454830 B5MCH6 92 aa8.7□□□□□ -1.02
CLK3-203ENST00000454830 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
CLK3-203ENST00000454830 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
CLK3-203ENST00000454830 Q6Q795 121 aa8.7□□□□□ -1.02
CLK3-203ENST00000454830 Q9BRP9 147 aa8.7□□□□□ -1.02
CLK3-203ENST00000454830 PRKDCP78527 4128 aaKnown RBP8.7□□□□□ -1.02
CLK3-203ENST00000454830 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
CLK3-203ENST00000454830 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
CLK3-203ENST00000454830 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
CLK3-203ENST00000454830 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
CLK3-203ENST00000454830 A0A087WVE0 104 aa8.68□□□□□ -1.02
CLK3-203ENST00000454830 PDE6GP18545 87 aa8.68□□□□□ -1.02
CLK3-203ENST00000454830 PLECQ15149 4684 aaKnown RBP8.67□□□□□ -1.02
CLK3-203ENST00000454830 Q8N377 158 aa8.67□□□□□ -1.02
CLK3-203ENST00000454830 Q6JHZ5 121 aa8.66□□□□□ -1.02
CLK3-203ENST00000454830 SCXQ7RTU7 201 aa8.66□□□□□ -1.02
CLK3-203ENST00000454830 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
CLK3-203ENST00000454830 C3orf84H3BNL1 204 aa8.66□□□□□ -1.02
CLK3-203ENST00000454830 FBN3Q75N90 2809 aa8.66□□□□□ -1.02
CLK3-203ENST00000454830 IMUPQ9GZP8 106 aa8.66□□□□□ -1.02
CLK3-203ENST00000454830 UBE2AP49459 152 aa8.65□□□□□ -1.02
CLK3-203ENST00000454830 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.03
CLK3-203ENST00000454830 A0A087WTM6 91 aa8.64□□□□□ -1.03
CLK3-203ENST00000454830 F8WEM9 126 aa8.64□□□□□ -1.03
CLK3-203ENST00000454830 SPRR1AP35321 89 aa8.64□□□□□ -1.03
CLK3-203ENST00000454830 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
CLK3-203ENST00000454830 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
CLK3-203ENST00000454830 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
CLK3-203ENST00000454830 TRBV7-4A0A0J9YYF1 115 aa8.63□□□□□ -1.03
CLK3-203ENST00000454830 PANO1I0J062 215 aa8.62□□□□□ -1.03
CLK3-203ENST00000454830 Q6ZVQ6 151 aa8.62□□□□□ -1.03
CLK3-203ENST00000454830 LINC00474Q9P2X8 69 aa8.62□□□□□ -1.03
CLK3-203ENST00000454830 DNAH7Q8WXX0 4024 aa8.61□□□□□ -1.03
CLK3-203ENST00000454830 RTL8CO15255 209 aa8.61□□□□□ -1.03
CLK3-203ENST00000454830 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
CLK3-203ENST00000454830 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
CLK3-203ENST00000454830 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
CLK3-203ENST00000454830 NREPQ16612 68 aa8.59□□□□□ -1.03
CLK3-203ENST00000454830 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
CLK3-203ENST00000454830 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.04
CLK3-203ENST00000454830 CCDC179H3BU77 68 aa8.59□□□□□ -1.04
CLK3-203ENST00000454830 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
CLK3-203ENST00000454830 A0A0G2JQZ4 141 aa8.58□□□□□ -1.04
CLK3-203ENST00000454830 LINC01547P58512 204 aaPredicted RBP8.58□□□□□ -1.04
CLK3-203ENST00000454830 DNAH1Q9P2D7 4330 aa8.57□□□□□ -1.04
CLK3-203ENST00000454830 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
CLK3-203ENST00000454830 WWC2-AS2Q96NR7 200 aa8.57□□□□□ -1.04
CLK3-203ENST00000454830 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
CLK3-203ENST00000454830 Q6ZR54 194 aa8.55□□□□□ -1.04
CLK3-203ENST00000454830 ATOX1O00244 68 aa8.53□□□□□ -1.04
CLK3-203ENST00000454830 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
CLK3-203ENST00000454830 Q8N9L7 120 aa8.53□□□□□ -1.04
CLK3-203ENST00000454830 TNP2Q05952 138 aa8.52□□□□□ -1.04
CLK3-203ENST00000454830 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
CLK3-203ENST00000454830 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
CLK3-203ENST00000454830 BPY2O14599 106 aa8.51□□□□□ -1.05
CLK3-203ENST00000454830 A0A1W2PNM2 257 aa8.5□□□□□ -1.05
CLK3-203ENST00000454830 C9orf153Q5TBE3 101 aa8.5□□□□□ -1.05
CLK3-203ENST00000454830 BCE1O60756 84 aa8.49□□□□□ -1.05
CLK3-203ENST00000454830 DYNC2H1Q8NCM8 4307 aaKnown RBP8.49□□□□□ -1.05
CLK3-203ENST00000454830 Q8NBF4 154 aa8.49□□□□□ -1.05
CLK3-203ENST00000454830 SMIM29Q86T20 159 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms