RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 TRBV6-5A0A0K0K1A5 114 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 LOC107984640A0A0U1RRK4 108 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 A0A1W2PNN7 141 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 ZNF727A8MUV8 499 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 HIGD1CA8MV81 97 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 C1orf196B1AJZ1 125 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 MT-ND6P03923 174 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 FOXA3P55318 350 aaPredicted RBP2.28□□□□□ -2.04
LINC00393-202ENST00000452852 C2orf91Q6ZV80 131 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 ANKRD29Q8N6D5 301 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 SMIM7Q9BQ49 75 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 TMEM191AQ9H0A3 160 aa2.28□□□□□ -2.04
LINC00393-202ENST00000452852 TRAV13-1A0A0B4J241 112 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 TRBV27A0A0K0K1C4 114 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 ALKAL2Q6UX46 152 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 AKAP14Q86UN6 197 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 TSKUQ8WUA8 353 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 HIGD2AQ9BW72 106 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
LINC00393-202ENST00000452852 LRP2P98164 4655 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 F8W036 122 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 S100A8P05109 93 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 CKS2P33552 79 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 POLR2KP53803 58 aaKnown RBP2.26□□□□□ -2.05
LINC00393-202ENST00000452852 SPAG11BQ08648 103 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 C5orf38Q86SI9 138 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 NUP35Q8NFH5 326 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 IMMP2LQ96T52 175 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 OSTCQ9NRP0 149 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 NAT8BQ9UHF3 227 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 UBE2D4Q9Y2X8 147 aa2.26□□□□□ -2.05
LINC00393-202ENST00000452852 LPAP08519 4548 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 TMEM238C9JI98 176 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 NDUFA1O15239 70 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 HBBP68871 147 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 ADIRFQ15847 76 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 C9orf116Q5BN46 136 aaPredicted RBP2.25□□□□□ -2.05
LINC00393-202ENST00000452852 Q6ZUT4 128 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 DIRC1Q969H9 104 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 C20orf78Q9BR46 151 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 TIMM21Q9BVV7 248 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 SPANXA1Q9NS26 97 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 PSORS1C2Q9UIG4 136 aa2.25□□□□□ -2.05
LINC00393-202ENST00000452852 A0A1W2PNM2 257 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 SRP19P09132 144 aaKnown RBP2.24□□□□□ -2.05
LINC00393-202ENST00000452852 IFI27P40305 119 aaPredicted RBP2.24□□□□□ -2.05
LINC00393-202ENST00000452852 UBE2D1P51668 147 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 UBE2BP63146 152 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 PEA15Q15121 130 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 PHF5AQ7RTV0 110 aaKnown RBP2.24□□□□□ -2.05
LINC00393-202ENST00000452852 MIEN1Q9BRT3 115 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 C2orf88Q9BSF0 95 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 MRPL35Q9NZE8 188 aaKnown RBP2.24□□□□□ -2.05
LINC00393-202ENST00000452852 NAT8Q9UHE5 227 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 V9GYV3 84 aa2.24□□□□□ -2.05
LINC00393-202ENST00000452852 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 SMIM27A0A1W2PRY6 76 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 D6R8Y8 96 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 PPBPP02775 128 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 RPL39P62891 51 aaKnown RBP2.23□□□□□ -2.05
LINC00393-202ENST00000452852 MRPS36P82909 103 aaKnown RBP2.23□□□□□ -2.05
LINC00393-202ENST00000452852 MRPL54Q6P161 138 aaKnown RBP2.23□□□□□ -2.05
LINC00393-202ENST00000452852 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 TMEM141Q96I45 108 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 SMIM2Q9BVW6 85 aa2.23□□□□□ -2.05
LINC00393-202ENST00000452852 TRBV30A0A0K0K1B3 111 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 C11orf86A6NJI1 115 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 NPYP01303 97 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 CKS1BP61024 79 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 PRELID3AQ96N28 172 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 C6orf48Q9UBA6 75 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 TP73-AS1Q9UF72 201 aa2.22□□□□□ -2.05
LINC00393-202ENST00000452852 H3BPC8 53 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 LEPROTO15243 131 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 NUPR1O60356 82 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 SEC11AP67812 179 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 UNQ6190/PRO20217Q6UXQ8 127 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 SMCR5Q8TEV8 140 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 TOMM7Q9P0U1 55 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 CYSLTR1Q9Y271 337 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 LAMTOR2Q9Y2Q5 125 aa2.21□□□□□ -2.06
LINC00393-202ENST00000452852 A0A1B0GW54 56 aa2.2□□□□□ -2.06
LINC00393-202ENST00000452852 K7EMI3 77 aa2.2□□□□□ -2.06
LINC00393-202ENST00000452852 MT-ND4LP03901 98 aa2.2□□□□□ -2.06
LINC00393-202ENST00000452852 C2orf82Q6UX34 121 aa2.2□□□□□ -2.06
LINC00393-202ENST00000452852 Q8N8P6 123 aa2.2□□□□□ -2.06
LINC00393-202ENST00000452852 NXT2Q9NPJ8 142 aaKnown RBP2.2□□□□□ -2.06
LINC00393-202ENST00000452852 F8VRH5 84 aa2.19□□□□□ -2.06
LINC00393-202ENST00000452852 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
LINC00393-202ENST00000452852 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
LINC00393-202ENST00000452852 RAB14P61106 215 aa2.19□□□□□ -2.06
LINC00393-202ENST00000452852 Q8IZM0 81 aa2.19□□□□□ -2.06
LINC00393-202ENST00000452852 XAGE1AQ9HD64 81 aa2.19□□□□□ -2.06
LINC00393-202ENST00000452852 C22orf24Q9Y442 160 aa2.19□□□□□ -2.06
LINC00393-202ENST00000452852 TRAV9-1A0A075B6T8 112 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms