RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 SPTBN4Q9H254 2564 aa12.17□□□□□ -0.46
PTPA-223ENST00000452489 PHF5AQ7RTV0 110 aaKnown RBP12.16□□□□□ -0.46
PTPA-223ENST00000452489 NCOR2Q9Y618 2525 aa12.16□□□□□ -0.46
PTPA-223ENST00000452489 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
PTPA-223ENST00000452489 DSCR9P59020 149 aa12.15□□□□□ -0.46
PTPA-223ENST00000452489 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
PTPA-223ENST00000452489 TEX15Q9BXT5 2789 aa12.15□□□□□ -0.46
PTPA-223ENST00000452489 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
PTPA-223ENST00000452489 EPG5Q9HCE0 2579 aa12.14□□□□□ -0.47
PTPA-223ENST00000452489 USP9XQ93008 2570 aaPredicted RBP12.14□□□□□ -0.47
PTPA-223ENST00000452489 CFAP46Q8IYW2 2715 aa12.14□□□□□ -0.47
PTPA-223ENST00000452489 NF1P21359 2839 aa12.12□□□□□ -0.47
PTPA-223ENST00000452489 Q75L30 129 aa12.12□□□□□ -0.47
PTPA-223ENST00000452489 WFDC13Q8IUB5 93 aa12.12□□□□□ -0.47
PTPA-223ENST00000452489 Q8NBF4 154 aa12.12□□□□□ -0.47
PTPA-223ENST00000452489 MP68P56378 58 aa12.12□□□□□ -0.47
PTPA-223ENST00000452489 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
PTPA-223ENST00000452489 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
PTPA-223ENST00000452489 CAMK2N2Q96S95 79 aa12.09□□□□□ -0.47
PTPA-223ENST00000452489 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
PTPA-223ENST00000452489 A0A1B0GW54 56 aa12.08□□□□□ -0.48
PTPA-223ENST00000452489 DEFB4AO15263 64 aa12.08□□□□□ -0.48
PTPA-223ENST00000452489 FSHBP01225 129 aa12.07□□□□□ -0.48
PTPA-223ENST00000452489 C7orf65Q6ZTY9 151 aa12.07□□□□□ -0.48
PTPA-223ENST00000452489 TNP2Q05952 138 aa12.07□□□□□ -0.48
PTPA-223ENST00000452489 Q9BRP9 147 aa12.07□□□□□ -0.48
PTPA-223ENST00000452489 CMC4P56277 68 aaPredicted RBP12.06□□□□□ -0.48
PTPA-223ENST00000452489 WFDC10BQ8IUB3 73 aa12.06□□□□□ -0.48
PTPA-223ENST00000452489 SPRR4Q96PI1 79 aa12.06□□□□□ -0.48
PTPA-223ENST00000452489 DNAJC9-AS1A6NH13 148 aa12.05□□□□□ -0.48
PTPA-223ENST00000452489 PRR34Q9NV39 138 aa12.05□□□□□ -0.48
PTPA-223ENST00000452489 POLQO75417 2590 aa12.05□□□□□ -0.48
PTPA-223ENST00000452489 SPANXA2-OT1Q8N9U9 137 aa12.04□□□□□ -0.48
PTPA-223ENST00000452489 CDC42SE1Q9NRR8 79 aa12.04□□□□□ -0.48
PTPA-223ENST00000452489 LOC101927531A0A1B0GV80 90 aa12.04□□□□□ -0.48
PTPA-223ENST00000452489 X6R8D5 127 aa12.04□□□□□ -0.48
PTPA-223ENST00000452489 A0A0G2JQZ4 141 aa12.03□□□□□ -0.48
PTPA-223ENST00000452489 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
PTPA-223ENST00000452489 MOBPQ13875 183 aa12.03□□□□□ -0.48
PTPA-223ENST00000452489 C8orf87E5RJ46 101 aa12.03□□□□□ -0.48
PTPA-223ENST00000452489 C7orf33Q8WU49 177 aa12.03□□□□□ -0.48
PTPA-223ENST00000452489 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.49
PTPA-223ENST00000452489 IGLV1-51P01701 117 aa12.01□□□□□ -0.49
PTPA-223ENST00000452489 H0Y9P7 68 aa12.01□□□□□ -0.49
PTPA-223ENST00000452489 CHD8Q9HCK8 2581 aa12.01□□□□□ -0.49
PTPA-223ENST00000452489 LRRK2Q5S007 2527 aa11.99□□□□□ -0.49
PTPA-223ENST00000452489 COA5Q86WW8 74 aa11.99□□□□□ -0.49
PTPA-223ENST00000452489 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
PTPA-223ENST00000452489 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
PTPA-223ENST00000452489 NAV2Q8IVL1 2488 aa11.98□□□□□ -0.49
PTPA-223ENST00000452489 SERTAD4-AS1Q5TG53 156 aa11.98□□□□□ -0.49
PTPA-223ENST00000452489 ANKRD17O75179 2603 aaKnown RBP11.96□□□□□ -0.49
PTPA-223ENST00000452489 LELP1Q5T871 98 aa11.96□□□□□ -0.49
PTPA-223ENST00000452489 RPL37AP61513 92 aaKnown RBP11.96□□□□□ -0.5
PTPA-223ENST00000452489 RPL37AP8A6NKH3 93 aa11.95□□□□□ -0.5
PTPA-223ENST00000452489 Q6ZRX8 168 aa11.95□□□□□ -0.5
PTPA-223ENST00000452489 NKAPP1Q8N9T2 125 aa11.95□□□□□ -0.5
PTPA-223ENST00000452489 HTN3P15516 51 aa11.95□□□□□ -0.5
PTPA-223ENST00000452489 OTOGQ6ZRI0 2925 aa11.94□□□□□ -0.5
PTPA-223ENST00000452489 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
PTPA-223ENST00000452489 DHRS4-AS1Q9P1J3 65 aa11.94□□□□□ -0.5
PTPA-223ENST00000452489 KRTAP29-1A8MX34 341 aaPredicted RBP11.92□□□□□ -0.5
PTPA-223ENST00000452489 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
PTPA-223ENST00000452489 SPAG11AQ6PDA7 123 aa11.91□□□□□ -0.5
PTPA-223ENST00000452489 FLNCQ14315 2725 aa11.9□□□□□ -0.5
PTPA-223ENST00000452489 CENPEQ02224 2701 aa11.9□□□□□ -0.5
PTPA-223ENST00000452489 SPINK7P58062 85 aa11.9□□□□□ -0.5
PTPA-223ENST00000452489 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
PTPA-223ENST00000452489 KRTAP4-16G5E9R7 235 aaPredicted RBP11.88□□□□□ -0.51
PTPA-223ENST00000452489 PRAC1Q96KF2 57 aa11.87□□□□□ -0.51
PTPA-223ENST00000452489 H3BPC8 53 aa11.86□□□□□ -0.51
PTPA-223ENST00000452489 KRTAP26-1Q6PEX3 210 aa11.86□□□□□ -0.51
PTPA-223ENST00000452489 CASC2Q6XLA1 102 aa11.86□□□□□ -0.51
PTPA-223ENST00000452489 DEFB135Q30KP9 77 aa11.85□□□□□ -0.51
PTPA-223ENST00000452489 ZNF469Q96JG9 3925 aaPredicted RBP11.85□□□□□ -0.51
PTPA-223ENST00000452489 A0A087WSZ3 146 aa11.85□□□□□ -0.51
PTPA-223ENST00000452489 H3BS24 57 aa11.84□□□□□ -0.51
PTPA-223ENST00000452489 LINC01558Q9Y6Z2 57 aa11.84□□□□□ -0.51
PTPA-223ENST00000452489 FAM168BA1KXE4 195 aa11.83□□□□□ -0.52
PTPA-223ENST00000452489 LINC00313P59037 77 aa11.83□□□□□ -0.52
PTPA-223ENST00000452489 IGFL1Q6UW32 110 aa11.83□□□□□ -0.52
PTPA-223ENST00000452489 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
PTPA-223ENST00000452489 IGLV7-46A0A075B6I9 117 aa11.82□□□□□ -0.52
PTPA-223ENST00000452489 CNBPP62633 177 aaKnown RBP11.81□□□□□ -0.52
PTPA-223ENST00000452489 PCOTHQ58A44 107 aa11.81□□□□□ -0.52
PTPA-223ENST00000452489 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
PTPA-223ENST00000452489 SPRR1AP35321 89 aa11.78□□□□□ -0.52
PTPA-223ENST00000452489 CACNA1AO00555 2505 aa11.77□□□□□ -0.52
PTPA-223ENST00000452489 DOPEY1Q5JWR5 2465 aa11.77□□□□□ -0.52
PTPA-223ENST00000452489 ADM2Q7Z4H4 148 aa11.77□□□□□ -0.53
PTPA-223ENST00000452489 F8P00451 2351 aa11.77□□□□□ -0.53
PTPA-223ENST00000452489 PKD1L2Q7Z442 2459 aa11.73□□□□□ -0.53
PTPA-223ENST00000452489 IGLV5-37A0A075B6J1 123 aa11.71□□□□□ -0.53
PTPA-223ENST00000452489 KRTAP7-1Q8IUC3 87 aa11.71□□□□□ -0.53
PTPA-223ENST00000452489 UNC79Q9P2D8 2635 aa11.71□□□□□ -0.53
PTPA-223ENST00000452489 HIVEP2P31629 2446 aa11.7□□□□□ -0.54
PTPA-223ENST00000452489 ACACBO00763 2458 aa11.69□□□□□ -0.54
PTPA-223ENST00000452489 Q8NAQ8 132 aa11.69□□□□□ -0.54
PTPA-223ENST00000452489 CCDC168Q8NDH2 2452 aa11.69□□□□□ -0.54
PTPA-223ENST00000452489 ANK3Q12955 4377 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms