RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 LRCOL1A6NCL2 159 aa6.8□□□□□ -1.32
VIPAS39-203ENST00000448935 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
VIPAS39-203ENST00000448935 Q6ZRN7 208 aaPredicted RBP6.8□□□□□ -1.32
VIPAS39-203ENST00000448935 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-203ENST00000448935 ACYP1P07311 99 aa6.79□□□□□ -1.32
VIPAS39-203ENST00000448935 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.79□□□□□ -1.32
VIPAS39-203ENST00000448935 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.79□□□□□ -1.32
VIPAS39-203ENST00000448935 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-203ENST00000448935 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
VIPAS39-203ENST00000448935 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
VIPAS39-203ENST00000448935 IGLV1-50A0A075B6I6 118 aa6.78□□□□□ -1.32
VIPAS39-203ENST00000448935 M0R2N4 97 aa6.78□□□□□ -1.32
VIPAS39-203ENST00000448935 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
VIPAS39-203ENST00000448935 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
VIPAS39-203ENST00000448935 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
VIPAS39-203ENST00000448935 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
VIPAS39-203ENST00000448935 Q6ZR54 194 aa6.77□□□□□ -1.33
VIPAS39-203ENST00000448935 FAM19A5Q7Z5A7 132 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-203ENST00000448935 A0A096LNI7 61 aa6.76□□□□□ -1.33
VIPAS39-203ENST00000448935 FAM168BA1KXE4 195 aa6.76□□□□□ -1.33
VIPAS39-203ENST00000448935 Q6ZQY7 126 aa6.76□□□□□ -1.33
VIPAS39-203ENST00000448935 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
VIPAS39-203ENST00000448935 DHRS4-AS1Q9P1J3 65 aa6.76□□□□□ -1.33
VIPAS39-203ENST00000448935 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
VIPAS39-203ENST00000448935 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
VIPAS39-203ENST00000448935 SPRR1AP35321 89 aa6.75□□□□□ -1.33
VIPAS39-203ENST00000448935 A0A087WTM6 91 aa6.74□□□□□ -1.33
VIPAS39-203ENST00000448935 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
VIPAS39-203ENST00000448935 C3orf84H3BNL1 204 aa6.74□□□□□ -1.33
VIPAS39-203ENST00000448935 C1orf134Q5TEV5 83 aa6.74□□□□□ -1.33
VIPAS39-203ENST00000448935 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
VIPAS39-203ENST00000448935 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
VIPAS39-203ENST00000448935 LY6G6CO95867 125 aa6.73□□□□□ -1.33
VIPAS39-203ENST00000448935 Q6ZRX8 168 aa6.73□□□□□ -1.33
VIPAS39-203ENST00000448935 LAMTOR3Q9UHA4 124 aa6.73□□□□□ -1.33
VIPAS39-203ENST00000448935 GAGE2AQ6NT46 116 aa6.72□□□□□ -1.33
VIPAS39-203ENST00000448935 REG3GQ6UW15 175 aa6.72□□□□□ -1.33
VIPAS39-203ENST00000448935 C14orf132Q9NPU4 83 aa6.72□□□□□ -1.33
VIPAS39-203ENST00000448935 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
VIPAS39-203ENST00000448935 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
VIPAS39-203ENST00000448935 SDIM1Q6ZPB5 146 aa6.72□□□□□ -1.33
VIPAS39-203ENST00000448935 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.34
VIPAS39-203ENST00000448935 PDE6GP18545 87 aa6.71□□□□□ -1.34
VIPAS39-203ENST00000448935 A0A1W2PNN7 141 aa6.7□□□□□ -1.34
VIPAS39-203ENST00000448935 CCKP06307 115 aa6.7□□□□□ -1.34
VIPAS39-203ENST00000448935 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-203ENST00000448935 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
VIPAS39-203ENST00000448935 XGP55808 180 aa6.69□□□□□ -1.34
VIPAS39-203ENST00000448935 DSCR8Q96T75 97 aa6.69□□□□□ -1.34
VIPAS39-203ENST00000448935 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
VIPAS39-203ENST00000448935 RTL8CO15255 209 aa6.68□□□□□ -1.34
VIPAS39-203ENST00000448935 UBE2BP63146 152 aa6.68□□□□□ -1.34
VIPAS39-203ENST00000448935 DNAH7Q8WXX0 4024 aa6.68□□□□□ -1.34
VIPAS39-203ENST00000448935 CHTF8P0CG12 524 aa6.67□□□□□ -1.34
VIPAS39-203ENST00000448935 NDUFV3P56181 108 aaKnown RBP6.67□□□□□ -1.34
VIPAS39-203ENST00000448935 LINC00643Q86TS7 51 aa6.67□□□□□ -1.34
VIPAS39-203ENST00000448935 DPH3Q96FX2 82 aa6.67□□□□□ -1.34
VIPAS39-203ENST00000448935 TENM2Q9NT68 2774 aa6.67□□□□□ -1.34
VIPAS39-203ENST00000448935 A0A1B0GV72 72 aa6.66□□□□□ -1.34
VIPAS39-203ENST00000448935 MT-ATP8P03928 68 aa6.66□□□□□ -1.34
VIPAS39-203ENST00000448935 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
VIPAS39-203ENST00000448935 Q9BRP9 147 aa6.66□□□□□ -1.34
VIPAS39-203ENST00000448935 VPS13DQ5THJ4 4388 aa6.66□□□□□ -1.34
VIPAS39-203ENST00000448935 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
VIPAS39-203ENST00000448935 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
VIPAS39-203ENST00000448935 LYSTQ99698 3801 aa6.65□□□□□ -1.35
VIPAS39-203ENST00000448935 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.35
VIPAS39-203ENST00000448935 H0Y9J4 135 aa6.65□□□□□ -1.35
VIPAS39-203ENST00000448935 Q6ZQT0 140 aa6.65□□□□□ -1.35
VIPAS39-203ENST00000448935 PHF5AQ7RTV0 110 aaKnown RBP6.65□□□□□ -1.35
VIPAS39-203ENST00000448935 IGLV5-48A0A075B6I7 105 aa6.64□□□□□ -1.35
VIPAS39-203ENST00000448935 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
VIPAS39-203ENST00000448935 TRBV7-4A0A0J9YYF1 115 aa6.63□□□□□ -1.35
VIPAS39-203ENST00000448935 Q6Q795 121 aa6.63□□□□□ -1.35
VIPAS39-203ENST00000448935 Q8N377 158 aa6.63□□□□□ -1.35
VIPAS39-203ENST00000448935 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
VIPAS39-203ENST00000448935 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
VIPAS39-203ENST00000448935 LINC01547P58512 204 aaPredicted RBP6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 LINC00846Q9NV44 126 aa6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 UBL5Q9BZL1 73 aa6.61□□□□□ -1.35
VIPAS39-203ENST00000448935 PANO1I0J062 215 aa6.6□□□□□ -1.35
VIPAS39-203ENST00000448935 BCE1O60756 84 aa6.6□□□□□ -1.35
VIPAS39-203ENST00000448935 UBE2AP49459 152 aa6.6□□□□□ -1.35
VIPAS39-203ENST00000448935 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.35
VIPAS39-203ENST00000448935 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
VIPAS39-203ENST00000448935 PRLHP81277 87 aa6.59□□□□□ -1.35
VIPAS39-203ENST00000448935 Q6JHZ5 121 aa6.59□□□□□ -1.35
VIPAS39-203ENST00000448935 HIGD2AQ9BW72 106 aa6.59□□□□□ -1.35
VIPAS39-203ENST00000448935 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
VIPAS39-203ENST00000448935 ATP5EP2Q5VTU8 51 aa6.58□□□□□ -1.36
VIPAS39-203ENST00000448935 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
VIPAS39-203ENST00000448935 A0A1B0GW54 56 aa6.58□□□□□ -1.36
VIPAS39-203ENST00000448935 F8WEM9 126 aa6.58□□□□□ -1.36
VIPAS39-203ENST00000448935 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
VIPAS39-203ENST00000448935 FUSP35637 526 aaKnown RBP eCLIP6.55□□□□□ -1.36
VIPAS39-203ENST00000448935 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms