RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 IFI27L1Q96BM0 104 aa9.75□□□□□ -0.85
CHCHD3-203ENST00000448878 MIEN1Q9BRT3 115 aa9.75□□□□□ -0.85
CHCHD3-203ENST00000448878 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
CHCHD3-203ENST00000448878 TRAV12-1A0A0B4J245 112 aa9.74□□□□□ -0.85
CHCHD3-203ENST00000448878 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
CHCHD3-203ENST00000448878 TRAV23DV6A0A075B6W5 121 aa9.72□□□□□ -0.85
CHCHD3-203ENST00000448878 SPANXB1Q9NS25 103 aaPredicted RBP9.72□□□□□ -0.85
CHCHD3-203ENST00000448878 H0Y8G0 127 aa9.71□□□□□ -0.86
CHCHD3-203ENST00000448878 S100A6P06703 90 aa9.71□□□□□ -0.86
CHCHD3-203ENST00000448878 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
CHCHD3-203ENST00000448878 LOC107984156A0A0G2JMH3 177 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BKO60814 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BJP06899 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BOP23527 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BBP33778 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BDP58876 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BCP62807 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST2H2BEQ16778 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 ARL17AQ8IVW1 177 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BHQ93079 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BNQ99877 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 HIST1H2BMQ99879 126 aa9.69□□□□□ -0.86
CHCHD3-203ENST00000448878 TSPEAR-AS2P59090 65 aa9.67□□□□□ -0.86
CHCHD3-203ENST00000448878 NPC2P61916 151 aa9.67□□□□□ -0.86
CHCHD3-203ENST00000448878 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
CHCHD3-203ENST00000448878 LEPROTO15243 131 aa9.66□□□□□ -0.86
CHCHD3-203ENST00000448878 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
CHCHD3-203ENST00000448878 NDUFC2O95298 119 aa9.65□□□□□ -0.86
CHCHD3-203ENST00000448878 CHCHD1Q96BP2 118 aaKnown RBP9.65□□□□□ -0.86
CHCHD3-203ENST00000448878 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
CHCHD3-203ENST00000448878 H7C2G1 150 aa9.64□□□□□ -0.87
CHCHD3-203ENST00000448878 COA6Q5JTJ3 125 aaKnown RBP9.63□□□□□ -0.87
CHCHD3-203ENST00000448878 J3QQQ9 107 aa9.62□□□□□ -0.87
CHCHD3-203ENST00000448878 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
CHCHD3-203ENST00000448878 OR13C6PQ8NH95 151 aa9.61□□□□□ -0.87
CHCHD3-203ENST00000448878 CBY1Q9Y3M2 126 aa9.61□□□□□ -0.87
CHCHD3-203ENST00000448878 KRTAP9-7A8MTY7 169 aa9.6□□□□□ -0.87
CHCHD3-203ENST00000448878 HSBP1O75506 76 aa9.6□□□□□ -0.87
CHCHD3-203ENST00000448878 S100A2P29034 98 aa9.6□□□□□ -0.87
CHCHD3-203ENST00000448878 SNRPEP62304 92 aaKnown RBP9.6□□□□□ -0.87
CHCHD3-203ENST00000448878 Q1RN00 199 aa9.6□□□□□ -0.87
CHCHD3-203ENST00000448878 SERF1AO75920 110 aa9.59□□□□□ -0.87
CHCHD3-203ENST00000448878 SPRR1BP22528 89 aa9.59□□□□□ -0.87
CHCHD3-203ENST00000448878 HERVK_113P61574 105 aa9.59□□□□□ -0.87
CHCHD3-203ENST00000448878 TAL2Q16559 108 aa9.59□□□□□ -0.87
CHCHD3-203ENST00000448878 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
CHCHD3-203ENST00000448878 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
CHCHD3-203ENST00000448878 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
CHCHD3-203ENST00000448878 PRO1933Q9H354 126 aa9.58□□□□□ -0.88
CHCHD3-203ENST00000448878 DHRS4-AS1Q9P1J3 65 aa9.58□□□□□ -0.88
CHCHD3-203ENST00000448878 NMUP48645 174 aa9.57□□□□□ -0.88
CHCHD3-203ENST00000448878 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
CHCHD3-203ENST00000448878 CD164Q04900 197 aa9.56□□□□□ -0.88
CHCHD3-203ENST00000448878 Q6Q795 121 aa9.56□□□□□ -0.88
CHCHD3-203ENST00000448878 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.55□□□□□ -0.88
CHCHD3-203ENST00000448878 PLNP26678 52 aa9.55□□□□□ -0.88
CHCHD3-203ENST00000448878 ADAMTSL4-AS1Q5T5F5 129 aa9.55□□□□□ -0.88
CHCHD3-203ENST00000448878 HIST3H2BBQ8N257 126 aa9.55□□□□□ -0.88
CHCHD3-203ENST00000448878 C1orf195Q5TG92 126 aa9.54□□□□□ -0.88
CHCHD3-203ENST00000448878 LEPROTL1O95214 131 aa9.53□□□□□ -0.88
CHCHD3-203ENST00000448878 LINC00310P59036 64 aa9.53□□□□□ -0.88
CHCHD3-203ENST00000448878 PMCHL2Q9BQD1 86 aa9.53□□□□□ -0.88
CHCHD3-203ENST00000448878 DPM2O94777 84 aa9.52□□□□□ -0.89
CHCHD3-203ENST00000448878 AKR1D1P51857 326 aa9.52□□□□□ -0.89
CHCHD3-203ENST00000448878 A0A0J9YXY3 114 aa9.51□□□□□ -0.89
CHCHD3-203ENST00000448878 COX7BP24311 80 aa9.51□□□□□ -0.89
CHCHD3-203ENST00000448878 FABP4P15090 132 aa9.5□□□□□ -0.89
CHCHD3-203ENST00000448878 HSPB8Q9UJY1 196 aa9.5□□□□□ -0.89
CHCHD3-203ENST00000448878 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
CHCHD3-203ENST00000448878 TEX49A0A1B0GTD5 131 aa9.49□□□□□ -0.89
CHCHD3-203ENST00000448878 IGKCP01834 107 aa9.49□□□□□ -0.89
CHCHD3-203ENST00000448878 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
CHCHD3-203ENST00000448878 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
CHCHD3-203ENST00000448878 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
CHCHD3-203ENST00000448878 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
CHCHD3-203ENST00000448878 Q5XG85 94 aa9.47□□□□□ -0.89
CHCHD3-203ENST00000448878 SMIM29Q86T20 159 aa9.47□□□□□ -0.89
CHCHD3-203ENST00000448878 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
CHCHD3-203ENST00000448878 LOC105371267A0A1B0GV96 52 aa9.46□□□□□ -0.9
CHCHD3-203ENST00000448878 LINC00308Q8TCZ7 52 aa9.46□□□□□ -0.9
CHCHD3-203ENST00000448878 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
CHCHD3-203ENST00000448878 KRTDAPP60985 99 aa9.43□□□□□ -0.9
CHCHD3-203ENST00000448878 TCL1BO95988 128 aa9.42□□□□□ -0.9
CHCHD3-203ENST00000448878 C20orf202A1L168 122 aa9.41□□□□□ -0.9
CHCHD3-203ENST00000448878 E9PLD3 99 aa9.4□□□□□ -0.9
CHCHD3-203ENST00000448878 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
CHCHD3-203ENST00000448878 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
CHCHD3-203ENST00000448878 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
CHCHD3-203ENST00000448878 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
CHCHD3-203ENST00000448878 LINC00518Q8N0U6 118 aa9.39□□□□□ -0.91
CHCHD3-203ENST00000448878 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
CHCHD3-203ENST00000448878 CFC1P0CG37 223 aa9.38□□□□□ -0.91
CHCHD3-203ENST00000448878 SCGB1D1O95968 90 aa9.37□□□□□ -0.91
CHCHD3-203ENST00000448878 LITAFQ99732 161 aa9.37□□□□□ -0.91
CHCHD3-203ENST00000448878 TIMM17BO60830 172 aa9.35□□□□□ -0.91
CHCHD3-203ENST00000448878 SMIM6P0DI80 62 aa9.35□□□□□ -0.91
CHCHD3-203ENST00000448878 IGLV5-48A0A075B6I7 105 aa9.33□□□□□ -0.92
CHCHD3-203ENST00000448878 A0A1B0GWB2 263 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms