RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
FAM3A-215ENST00000447601 MRPL55Q7Z7F7 128 aaKnown RBP12.53□□□□□ -0.4
FAM3A-215ENST00000447601 RPL37AP8A6NKH3 93 aa12.53□□□□□ -0.4
FAM3A-215ENST00000447601 LOC110117498A0A087WWA1 95 aa12.52□□□□□ -0.41
FAM3A-215ENST00000447601 C16orf90A8MZG2 172 aa12.52□□□□□ -0.41
FAM3A-215ENST00000447601 IMUPQ9GZP8 106 aa12.52□□□□□ -0.41
FAM3A-215ENST00000447601 LINC00846Q9NV44 126 aa12.52□□□□□ -0.41
FAM3A-215ENST00000447601 SPRR1AP35321 89 aa12.51□□□□□ -0.41
FAM3A-215ENST00000447601 LYSTQ99698 3801 aa12.5□□□□□ -0.41
FAM3A-215ENST00000447601 PDE6GP18545 87 aa12.49□□□□□ -0.41
FAM3A-215ENST00000447601 Q6ZQT0 140 aa12.49□□□□□ -0.41
FAM3A-215ENST00000447601 DSCR8Q96T75 97 aa12.49□□□□□ -0.41
FAM3A-215ENST00000447601 DHRS4-AS1Q9P1J3 65 aa12.49□□□□□ -0.41
FAM3A-215ENST00000447601 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.48□□□□□ -0.41
FAM3A-215ENST00000447601 A0A096LNI7 61 aa12.48□□□□□ -0.41
FAM3A-215ENST00000447601 ETDCA0A1B0GVM5 59 aa12.48□□□□□ -0.41
FAM3A-215ENST00000447601 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
FAM3A-215ENST00000447601 Q6ZRX8 168 aa12.48□□□□□ -0.41
FAM3A-215ENST00000447601 B5MCH6 92 aa12.47□□□□□ -0.41
FAM3A-215ENST00000447601 PKIGQ9Y2B9 76 aa12.47□□□□□ -0.41
FAM3A-215ENST00000447601 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.41
FAM3A-215ENST00000447601 CSMD3Q7Z407 3707 aa12.46□□□□□ -0.41
FAM3A-215ENST00000447601 IGKV2-24A0A0C4DH68 120 aa12.46□□□□□ -0.42
FAM3A-215ENST00000447601 NDUFV3P56181 108 aaKnown RBP12.46□□□□□ -0.42
FAM3A-215ENST00000447601 PLECQ15149 4684 aaKnown RBP12.45□□□□□ -0.42
FAM3A-215ENST00000447601 Q6ZRN7 208 aaPredicted RBP12.45□□□□□ -0.42
FAM3A-215ENST00000447601 Q6JHZ5 121 aa12.44□□□□□ -0.42
FAM3A-215ENST00000447601 DNHD1Q96M86 4753 aa12.44□□□□□ -0.42
FAM3A-215ENST00000447601 PRKDCP78527 4128 aaKnown RBP12.43□□□□□ -0.42
FAM3A-215ENST00000447601 REG3GQ6UW15 175 aa12.42□□□□□ -0.42
FAM3A-215ENST00000447601 ANAPC13Q9BS18 74 aa12.42□□□□□ -0.42
FAM3A-215ENST00000447601 TRBV7-4A0A0J9YYF1 115 aa12.41□□□□□ -0.42
FAM3A-215ENST00000447601 C9orf163Q8N9P6 203 aa12.41□□□□□ -0.42
FAM3A-215ENST00000447601 Q9BRP9 147 aa12.41□□□□□ -0.42
FAM3A-215ENST00000447601 DNAH10Q8IVF4 4471 aa12.41□□□□□ -0.42
FAM3A-215ENST00000447601 MEGF8Q7Z7M0 2845 aa12.4□□□□□ -0.42
FAM3A-215ENST00000447601 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
FAM3A-215ENST00000447601 UBL5Q9BZL1 73 aa12.4□□□□□ -0.42
FAM3A-215ENST00000447601 DNAH7Q8WXX0 4024 aa12.39□□□□□ -0.43
FAM3A-215ENST00000447601 M0R2N4 97 aa12.38□□□□□ -0.43
FAM3A-215ENST00000447601 ATP5EP2Q5VTU8 51 aa12.37□□□□□ -0.43
FAM3A-215ENST00000447601 DEFB105AQ8NG35 78 aa12.37□□□□□ -0.43
FAM3A-215ENST00000447601 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
FAM3A-215ENST00000447601 Q8N377 158 aa12.37□□□□□ -0.43
FAM3A-215ENST00000447601 IGKV3D-7A0A0C4DH55 119 aa12.36□□□□□ -0.43
FAM3A-215ENST00000447601 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
FAM3A-215ENST00000447601 LINC01547P58512 204 aaPredicted RBP12.35□□□□□ -0.43
FAM3A-215ENST00000447601 UBE2BP63146 152 aa12.35□□□□□ -0.43
FAM3A-215ENST00000447601 FAM236AA0A1B0GUQ0 79 aa12.34□□□□□ -0.43
FAM3A-215ENST00000447601 FAM236BA0A1B0GV22 79 aa12.34□□□□□ -0.43
FAM3A-215ENST00000447601 CHTF8P0CG12 524 aa12.34□□□□□ -0.43
FAM3A-215ENST00000447601 IGLV5-48A0A075B6I7 105 aa12.32□□□□□ -0.44
FAM3A-215ENST00000447601 TENM2Q9NT68 2774 aa12.32□□□□□ -0.44
FAM3A-215ENST00000447601 Q6ZR54 194 aa12.31□□□□□ -0.44
FAM3A-215ENST00000447601 A0A087WTM6 91 aa12.3□□□□□ -0.44
FAM3A-215ENST00000447601 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
FAM3A-215ENST00000447601 VPS13DQ5THJ4 4388 aa12.29□□□□□ -0.44
FAM3A-215ENST00000447601 ERC2-IT1O76042 136 aa12.29□□□□□ -0.44
FAM3A-215ENST00000447601 FAM19A1Q7Z5A9 133 aa12.29□□□□□ -0.44
FAM3A-215ENST00000447601 PHF5AQ7RTV0 110 aaKnown RBP12.28□□□□□ -0.44
FAM3A-215ENST00000447601 Q6ZVQ6 151 aa12.27□□□□□ -0.45
FAM3A-215ENST00000447601 C3orf22Q8N5N4 141 aa12.25□□□□□ -0.45
FAM3A-215ENST00000447601 HIST1H4AP62805 103 aaKnown RBP12.24□□□□□ -0.45
FAM3A-215ENST00000447601 PRLHP81277 87 aa12.24□□□□□ -0.45
FAM3A-215ENST00000447601 TNP2Q05952 138 aa12.23□□□□□ -0.45
FAM3A-215ENST00000447601 H0Y9J4 135 aa12.22□□□□□ -0.45
FAM3A-215ENST00000447601 SPACA4Q8TDM5 124 aa12.22□□□□□ -0.45
FAM3A-215ENST00000447601 HAMPP81172 84 aa12.21□□□□□ -0.45
FAM3A-215ENST00000447601 DPH3Q96FX2 82 aa12.21□□□□□ -0.45
FAM3A-215ENST00000447601 A0A087WVE0 104 aa12.21□□□□□ -0.46
FAM3A-215ENST00000447601 PANO1I0J062 215 aa12.21□□□□□ -0.46
FAM3A-215ENST00000447601 C1orf134Q5TEV5 83 aa12.21□□□□□ -0.46
FAM3A-215ENST00000447601 KRTAP11-1Q8IUC1 163 aa12.21□□□□□ -0.46
FAM3A-215ENST00000447601 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
FAM3A-215ENST00000447601 RTL8CO15255 209 aa12.19□□□□□ -0.46
FAM3A-215ENST00000447601 CXCL6P80162 114 aa12.19□□□□□ -0.46
FAM3A-215ENST00000447601 A0A1B0GW54 56 aa12.18□□□□□ -0.46
FAM3A-215ENST00000447601 ATOX1O00244 68 aa12.18□□□□□ -0.46
FAM3A-215ENST00000447601 LY6G6CO95867 125 aa12.18□□□□□ -0.46
FAM3A-215ENST00000447601 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.46
FAM3A-215ENST00000447601 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
FAM3A-215ENST00000447601 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
FAM3A-215ENST00000447601 F8WEM9 126 aa12.17□□□□□ -0.46
FAM3A-215ENST00000447601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-215ENST00000447601 SMIM29Q86T20 159 aa12.16□□□□□ -0.46
FAM3A-215ENST00000447601 WWC2-AS2Q96NR7 200 aa12.16□□□□□ -0.46
FAM3A-215ENST00000447601 FBN3Q75N90 2809 aa12.16□□□□□ -0.46
FAM3A-215ENST00000447601 UBE2AP49459 152 aa12.15□□□□□ -0.46
FAM3A-215ENST00000447601 BCE1O60756 84 aa12.14□□□□□ -0.47
FAM3A-215ENST00000447601 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
FAM3A-215ENST00000447601 NREPQ16612 68 aa12.13□□□□□ -0.47
FAM3A-215ENST00000447601 Q8NBF4 154 aa12.13□□□□□ -0.47
FAM3A-215ENST00000447601 LINC00476Q8WZB0 136 aa12.13□□□□□ -0.47
FAM3A-215ENST00000447601 A0A1W2PNM2 257 aa12.12□□□□□ -0.47
FAM3A-215ENST00000447601 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
FAM3A-215ENST00000447601 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
FAM3A-215ENST00000447601 SPRR1BP22528 89 aa12.09□□□□□ -0.47
FAM3A-215ENST00000447601 SPRR4Q96PI1 79 aa12.09□□□□□ -0.47
FAM3A-215ENST00000447601 IGLV8-61A0A075B6I0 122 aa12.08□□□□□ -0.48
FAM3A-215ENST00000447601 KRTAP13-1Q8IUC0 172 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms