RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 TM2D3Q9BRN9 247 aa12.48□□□□□ -0.41
PAXBP1-204ENST00000443785 BPY2O14599 106 aa12.47□□□□□ -0.41
PAXBP1-204ENST00000443785 ELOF1P60002 83 aaKnown RBP12.46□□□□□ -0.41
PAXBP1-204ENST00000443785 NDUFC2-KCTD14E9PQ53 114 aa12.45□□□□□ -0.42
PAXBP1-204ENST00000443785 KRTAP26-1Q6PEX3 210 aa12.45□□□□□ -0.42
PAXBP1-204ENST00000443785 STAB2Q8WWQ8 2551 aa12.45□□□□□ -0.42
PAXBP1-204ENST00000443785 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
PAXBP1-204ENST00000443785 C4orf26Q17RF5 130 aa12.44□□□□□ -0.42
PAXBP1-204ENST00000443785 LOC110117498A0A087WWA1 95 aa12.44□□□□□ -0.42
PAXBP1-204ENST00000443785 M0R378 163 aa12.43□□□□□ -0.42
PAXBP1-204ENST00000443785 SYCNQ0VAF6 134 aa12.43□□□□□ -0.42
PAXBP1-204ENST00000443785 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
PAXBP1-204ENST00000443785 EGFEM1PQ0D2K5 195 aa12.42□□□□□ -0.42
PAXBP1-204ENST00000443785 ST20-AS1Q8NBB2 130 aa12.42□□□□□ -0.42
PAXBP1-204ENST00000443785 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
PAXBP1-204ENST00000443785 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
PAXBP1-204ENST00000443785 TMEM258P61165 79 aa12.41□□□□□ -0.42
PAXBP1-204ENST00000443785 C7orf33Q8WU49 177 aa12.4□□□□□ -0.42
PAXBP1-204ENST00000443785 LINC00528Q8N1L1 170 aa12.4□□□□□ -0.42
PAXBP1-204ENST00000443785 LYSTQ99698 3801 aa12.4□□□□□ -0.43
PAXBP1-204ENST00000443785 HRCT1Q6UXD1 115 aa12.39□□□□□ -0.43
PAXBP1-204ENST00000443785 TRBV7-4A0A0J9YYF1 115 aa12.38□□□□□ -0.43
PAXBP1-204ENST00000443785 COL7A1Q02388 2944 aa12.36□□□□□ -0.43
PAXBP1-204ENST00000443785 F8WEM9 126 aa12.36□□□□□ -0.43
PAXBP1-204ENST00000443785 NREPQ16612 68 aa12.36□□□□□ -0.43
PAXBP1-204ENST00000443785 C5orf47Q569G3 176 aa12.34□□□□□ -0.43
PAXBP1-204ENST00000443785 DEFB116Q30KQ4 102 aa12.33□□□□□ -0.44
PAXBP1-204ENST00000443785 Q8N377 158 aa12.33□□□□□ -0.44
PAXBP1-204ENST00000443785 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
PAXBP1-204ENST00000443785 H7BZZ5 65 aa12.32□□□□□ -0.44
PAXBP1-204ENST00000443785 TRAV7A0A075B6U4 112 aa12.32□□□□□ -0.44
PAXBP1-204ENST00000443785 FAM236DA0A1B0GTK5 79 aa12.32□□□□□ -0.44
PAXBP1-204ENST00000443785 FAM236CP0DP71 79 aa12.32□□□□□ -0.44
PAXBP1-204ENST00000443785 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
PAXBP1-204ENST00000443785 ERC2-IT1O76042 136 aa12.31□□□□□ -0.44
PAXBP1-204ENST00000443785 UBE2BP63146 152 aa12.29□□□□□ -0.44
PAXBP1-204ENST00000443785 DNAH10Q8IVF4 4471 aa12.29□□□□□ -0.44
PAXBP1-204ENST00000443785 RPS28P62857 69 aaKnown RBP12.28□□□□□ -0.44
PAXBP1-204ENST00000443785 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
PAXBP1-204ENST00000443785 Q9BRP9 147 aa12.28□□□□□ -0.44
PAXBP1-204ENST00000443785 ETDCA0A1B0GVM5 59 aa12.27□□□□□ -0.45
PAXBP1-204ENST00000443785 PDE6GP18545 87 aa12.27□□□□□ -0.45
PAXBP1-204ENST00000443785 LINC01556Q5JQF7 62 aa12.27□□□□□ -0.45
PAXBP1-204ENST00000443785 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
PAXBP1-204ENST00000443785 CXCL6P80162 114 aa12.26□□□□□ -0.45
PAXBP1-204ENST00000443785 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
PAXBP1-204ENST00000443785 KRTAP7-1Q8IUC3 87 aa12.24□□□□□ -0.45
PAXBP1-204ENST00000443785 IGKV4-1P06312 121 aa12.23□□□□□ -0.45
PAXBP1-204ENST00000443785 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
PAXBP1-204ENST00000443785 Q5XG85 94 aa12.22□□□□□ -0.45
PAXBP1-204ENST00000443785 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
PAXBP1-204ENST00000443785 A0A1W2PNM2 257 aa12.21□□□□□ -0.45
PAXBP1-204ENST00000443785 PRLHP81277 87 aa12.21□□□□□ -0.45
PAXBP1-204ENST00000443785 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
PAXBP1-204ENST00000443785 KCNQ1DNQ9H478 68 aa12.21□□□□□ -0.46
PAXBP1-204ENST00000443785 C1orf137Q5JT78 98 aa12.2□□□□□ -0.46
PAXBP1-204ENST00000443785 A0A096LNI7 61 aa12.19□□□□□ -0.46
PAXBP1-204ENST00000443785 LRCOL1A6NCL2 159 aa12.19□□□□□ -0.46
PAXBP1-204ENST00000443785 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
PAXBP1-204ENST00000443785 TMEM254Q8TBM7 123 aa12.19□□□□□ -0.46
PAXBP1-204ENST00000443785 Q6ZRX8 168 aa12.18□□□□□ -0.46
PAXBP1-204ENST00000443785 PRR4Q16378 134 aa12.17□□□□□ -0.46
PAXBP1-204ENST00000443785 CMYA5Q8N3K9 4069 aa12.17□□□□□ -0.46
PAXBP1-204ENST00000443785 H3BNG1 76 aa12.17□□□□□ -0.46
PAXBP1-204ENST00000443785 WIPF1O43516 503 aa12.16□□□□□ -0.46
PAXBP1-204ENST00000443785 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.46
PAXBP1-204ENST00000443785 IGLV1-50A0A075B6I6 118 aa12.15□□□□□ -0.46
PAXBP1-204ENST00000443785 MPLKIPQ8TAP9 179 aa12.15□□□□□ -0.46
PAXBP1-204ENST00000443785 KLKP1Q107X0 134 aa12.14□□□□□ -0.47
PAXBP1-204ENST00000443785 CHTF8P0CG12 524 aa12.14□□□□□ -0.47
PAXBP1-204ENST00000443785 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
PAXBP1-204ENST00000443785 DNAH10OSP0CZ25 163 aa12.14□□□□□ -0.47
PAXBP1-204ENST00000443785 H3BQ85 93 aa12.11□□□□□ -0.47
PAXBP1-204ENST00000443785 K7EQZ3 153 aa12.1□□□□□ -0.47
PAXBP1-204ENST00000443785 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
PAXBP1-204ENST00000443785 FAM229BQ4G0N7 80 aa12.1□□□□□ -0.47
PAXBP1-204ENST00000443785 PSCAO43653 123 aa12.08□□□□□ -0.48
PAXBP1-204ENST00000443785 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.48
PAXBP1-204ENST00000443785 WFDC13Q8IUB5 93 aa12.07□□□□□ -0.48
PAXBP1-204ENST00000443785 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
PAXBP1-204ENST00000443785 KRTAP4-16G5E9R7 235 aaPredicted RBP12.06□□□□□ -0.48
PAXBP1-204ENST00000443785 OCR1Q9BZK8 76 aa12.06□□□□□ -0.48
PAXBP1-204ENST00000443785 SERP1Q9Y6X1 66 aa12.06□□□□□ -0.48
PAXBP1-204ENST00000443785 HUWE1Q7Z6Z7 4374 aaKnown RBP12.06□□□□□ -0.48
PAXBP1-204ENST00000443785 IGLV5-48A0A075B6I7 105 aa12.05□□□□□ -0.48
PAXBP1-204ENST00000443785 FP248Q71RG6 208 aaPredicted RBP12.05□□□□□ -0.48
PAXBP1-204ENST00000443785 REG3GQ6UW15 175 aa12.04□□□□□ -0.48
PAXBP1-204ENST00000443785 LINC00476Q8WZB0 136 aa12.04□□□□□ -0.48
PAXBP1-204ENST00000443785 PRYO14603 147 aa12.03□□□□□ -0.48
PAXBP1-204ENST00000443785 A0A087WSZ3 146 aa12.03□□□□□ -0.48
PAXBP1-204ENST00000443785 EPM2AB3EWF7 344 aa12.03□□□□□ -0.48
PAXBP1-204ENST00000443785 Q8NBF4 154 aa12.03□□□□□ -0.48
PAXBP1-204ENST00000443785 K7EIL1 84 aa12.02□□□□□ -0.48
PAXBP1-204ENST00000443785 KRTAP11-1Q8IUC1 163 aa12.02□□□□□ -0.48
PAXBP1-204ENST00000443785 DSCR10P59022 87 aa12.02□□□□□ -0.49
PAXBP1-204ENST00000443785 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.49
PAXBP1-204ENST00000443785 PHF5AQ7RTV0 110 aaKnown RBP12.01□□□□□ -0.49
PAXBP1-204ENST00000443785 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
PAXBP1-204ENST00000443785 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
PAXBP1-204ENST00000443785 IGFL1Q6UW32 110 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms