RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 A0A0J9YWU9 116 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 IGHV4-30-4P0DP06 118 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 ELOF1P60002 83 aaKnown RBP3.37□□□□□ -1.87
HERC1-201ENST00000443617 Q6ZRP5 223 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 Q8NDZ9 215 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 LINC00208Q96KT6 92 aa3.37□□□□□ -1.87
HERC1-201ENST00000443617 WFDC13Q8IUB5 93 aa3.36□□□□□ -1.87
HERC1-201ENST00000443617 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
HERC1-201ENST00000443617 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.36□□□□□ -1.87
HERC1-201ENST00000443617 CELSR3Q9NYQ7 3312 aa3.36□□□□□ -1.87
HERC1-201ENST00000443617 SPART-AS1P0CW21 52 aa3.36□□□□□ -1.87
HERC1-201ENST00000443617 SYCNQ0VAF6 134 aa3.35□□□□□ -1.87
HERC1-201ENST00000443617 CSNK1G2-AS1Q8NCQ2 148 aa3.35□□□□□ -1.87
HERC1-201ENST00000443617 CELSR2Q9HCU4 2923 aa3.35□□□□□ -1.87
HERC1-201ENST00000443617 DEFB116Q30KQ4 102 aa3.35□□□□□ -1.87
HERC1-201ENST00000443617 Q8NBF4 154 aa3.35□□□□□ -1.87
HERC1-201ENST00000443617 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
HERC1-201ENST00000443617 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
HERC1-201ENST00000443617 NIPBLQ6KC79 2804 aaeCLIP3.34□□□□□ -1.871e-6■■■□□ 19.2
HERC1-201ENST00000443617 CYP4F30PQ9H0H9 118 aa3.34□□□□□ -1.87
HERC1-201ENST00000443617 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.87
HERC1-201ENST00000443617 FBN2P35556 2912 aa3.34□□□□□ -1.88
HERC1-201ENST00000443617 LINC00528Q8N1L1 170 aa3.34□□□□□ -1.88
HERC1-201ENST00000443617 HIVEP1P15822 2718 aa3.34□□□□□ -1.88
HERC1-201ENST00000443617 C7orf33Q8WU49 177 aa3.34□□□□□ -1.88
HERC1-201ENST00000443617 DNAJC9-AS1A6NH13 148 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 KCNQ1DNQ9H478 68 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 DEFB135Q30KP9 77 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 LINC00588Q9Y4M8 146 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 BOD1L1Q8NFC6 3051 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 ATMQ13315 3056 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 LINC00612Q8N6U2 182 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 IGSF10Q6WRI0 2623 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 C4orf48Q5BLP8 95 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 IGKV2D-24A0A075B6R9 120 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 C7orf65Q6ZTY9 151 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 K7ERS5 55 aa3.33□□□□□ -1.88
HERC1-201ENST00000443617 Q5VV11 94 aa3.32□□□□□ -1.88
HERC1-201ENST00000443617 H0Y9P7 68 aa3.32□□□□□ -1.88
HERC1-201ENST00000443617 H3BPC8 53 aa3.32□□□□□ -1.88
HERC1-201ENST00000443617 IGLV1-51P01701 117 aa3.32□□□□□ -1.88
HERC1-201ENST00000443617 Q8N377 158 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 SPANXA2-OT1Q8N9U9 137 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 A0A1W2PNM2 257 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
HERC1-201ENST00000443617 C14orf177Q52M58 125 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 Q6ZRX8 168 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 DMXL1Q9Y485 3027 aa3.31□□□□□ -1.88
HERC1-201ENST00000443617 LOC101927531A0A1B0GV80 90 aa3.3□□□□□ -1.88
HERC1-201ENST00000443617 H0Y9J4 135 aa3.3□□□□□ -1.88
HERC1-201ENST00000443617 FSHBP01225 129 aa3.3□□□□□ -1.88
HERC1-201ENST00000443617 Q75L30 129 aa3.3□□□□□ -1.88
HERC1-201ENST00000443617 C19orf73Q9NVV2 129 aa3.3□□□□□ -1.88
HERC1-201ENST00000443617 MXRA5Q9NR99 2828 aa3.3□□□□□ -1.88
HERC1-201ENST00000443617 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 X6R8D5 127 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 DSCR10P59022 87 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 COA5Q86WW8 74 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 IGLV5-48A0A075B6I7 105 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 K7EQZ3 153 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
HERC1-201ENST00000443617 LCE6AA0A183 80 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 A0A087WSZ3 146 aa3.29□□□□□ -1.88
HERC1-201ENST00000443617 C16orf90A8MZG2 172 aa3.28□□□□□ -1.88
HERC1-201ENST00000443617 LCA10Q71F78 164 aa3.28□□□□□ -1.88
HERC1-201ENST00000443617 SPEGQ15772 3267 aa3.28□□□□□ -1.88
HERC1-201ENST00000443617 DEFB113Q30KQ7 82 aa3.28□□□□□ -1.88
HERC1-201ENST00000443617 Q9BRP9 147 aa3.27□□□□□ -1.89
HERC1-201ENST00000443617 REG3GQ6UW15 175 aa3.27□□□□□ -1.89
HERC1-201ENST00000443617 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
HERC1-201ENST00000443617 HRNRQ86YZ3 2850 aaPredicted RBP3.27□□□□□ -1.89
HERC1-201ENST00000443617 SERTAD4-AS1Q5TG53 156 aa3.27□□□□□ -1.89
HERC1-201ENST00000443617 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
HERC1-201ENST00000443617 PHF5AQ7RTV0 110 aaKnown RBP3.26□□□□□ -1.89
HERC1-201ENST00000443617 SZT2Q5T011 3432 aa3.26□□□□□ -1.89
HERC1-201ENST00000443617 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
HERC1-201ENST00000443617 A0A1W2PNN7 141 aa3.26□□□□□ -1.89
HERC1-201ENST00000443617 FAM168BA1KXE4 195 aa3.26□□□□□ -1.89
HERC1-201ENST00000443617 MYO15AQ9UKN7 3530 aa3.26□□□□□ -1.89
HERC1-201ENST00000443617 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
HERC1-201ENST00000443617 DCHS2Q6V1P9 2916 aa3.25□□□□□ -1.89
HERC1-201ENST00000443617 TP53AIP1Q9HCN2 124 aa3.25□□□□□ -1.89
HERC1-201ENST00000443617 LINC00476Q8WZB0 136 aa3.25□□□□□ -1.89
HERC1-201ENST00000443617 COL12A1Q99715 3063 aa3.25□□□□□ -1.89
HERC1-201ENST00000443617 A8MWP4 228 aa3.25□□□□□ -1.89
HERC1-201ENST00000443617 C15orf56Q8N910 161 aa3.24□□□□□ -1.89
HERC1-201ENST00000443617 A6NN06 94 aa3.24□□□□□ -1.89
HERC1-201ENST00000443617 A8MU10 97 aa3.24□□□□□ -1.89
HERC1-201ENST00000443617 DMDP11532 3685 aa3.24□□□□□ -1.89
HERC1-201ENST00000443617 RPL37AP61513 92 aaKnown RBP3.24□□□□□ -1.89
HERC1-201ENST00000443617 MOBPQ13875 183 aa3.24□□□□□ -1.89
HERC1-201ENST00000443617 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
HERC1-201ENST00000443617 IGLV7-46A0A075B6I9 117 aa3.23□□□□□ -1.89
HERC1-201ENST00000443617 IGLV1-50A0A075B6I6 118 aa3.23□□□□□ -1.89
HERC1-201ENST00000443617 PLA2G2DQ9UNK4 145 aa3.23□□□□□ -1.89
HERC1-201ENST00000443617 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
HERC1-201ENST00000443617 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms