RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 PCOTHQ58A44 107 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
POLR2J3-202ENST00000443430 IGLV8-61A0A075B6I0 122 aa11.32□□□□□ -0.6
POLR2J3-202ENST00000443430 TRBV10-3A0A0K0K1G6 114 aa11.31□□□□□ -0.6
POLR2J3-202ENST00000443430 B5MCH6 92 aa11.3□□□□□ -0.6
POLR2J3-202ENST00000443430 NMUP48645 174 aa11.3□□□□□ -0.6
POLR2J3-202ENST00000443430 SYS1-DBNDD2H3BUS1 97 aa11.27□□□□□ -0.61
POLR2J3-202ENST00000443430 Q9BRP9 147 aa11.27□□□□□ -0.61
POLR2J3-202ENST00000443430 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
POLR2J3-202ENST00000443430 E9PLD3 99 aa11.25□□□□□ -0.61
POLR2J3-202ENST00000443430 NPC2P61916 151 aa11.24□□□□□ -0.61
POLR2J3-202ENST00000443430 S100A12P80511 92 aa11.24□□□□□ -0.61
POLR2J3-202ENST00000443430 FLGP20930 4061 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-202ENST00000443430 S100A1P23297 94 aa11.23□□□□□ -0.61
POLR2J3-202ENST00000443430 LOC107984156A0A0G2JMH3 177 aa11.22□□□□□ -0.61
POLR2J3-202ENST00000443430 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
POLR2J3-202ENST00000443430 DDTP30046 118 aa11.22□□□□□ -0.61
POLR2J3-202ENST00000443430 C9orf153Q5TBE3 101 aa11.22□□□□□ -0.61
POLR2J3-202ENST00000443430 ARL17AQ8IVW1 177 aa11.22□□□□□ -0.61
POLR2J3-202ENST00000443430 LINC01545Q5VT33 79 aa11.21□□□□□ -0.61
POLR2J3-202ENST00000443430 PET117Q6UWS5 81 aa11.21□□□□□ -0.61
POLR2J3-202ENST00000443430 Q6ZRX8 168 aa11.21□□□□□ -0.61
POLR2J3-202ENST00000443430 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-202ENST00000443430 TRBV10-2A0A0K0K1G8 114 aa11.2□□□□□ -0.62
POLR2J3-202ENST00000443430 C9orf92A6NGG3 77 aa11.2□□□□□ -0.62
POLR2J3-202ENST00000443430 M0R2T5 61 aa11.2□□□□□ -0.62
POLR2J3-202ENST00000443430 S100A7L2Q5SY68 101 aa11.19□□□□□ -0.62
POLR2J3-202ENST00000443430 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
POLR2J3-202ENST00000443430 KRTDAPP60985 99 aa11.18□□□□□ -0.62
POLR2J3-202ENST00000443430 ADAMTSL4-AS1Q5T5F5 129 aa11.18□□□□□ -0.62
POLR2J3-202ENST00000443430 SOSTDC1Q6X4U4 206 aa11.18□□□□□ -0.62
POLR2J3-202ENST00000443430 NDUFC2O95298 119 aa11.16□□□□□ -0.62
POLR2J3-202ENST00000443430 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-202ENST00000443430 COA6Q5JTJ3 125 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-202ENST00000443430 ZNF815PA8K554 130 aa11.14□□□□□ -0.63
POLR2J3-202ENST00000443430 KRTAP9-7A8MTY7 169 aa11.14□□□□□ -0.63
POLR2J3-202ENST00000443430 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
POLR2J3-202ENST00000443430 IGLV6-57P01721 117 aa11.12□□□□□ -0.63
POLR2J3-202ENST00000443430 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
POLR2J3-202ENST00000443430 TTTY13Q9BZ97 58 aa11.12□□□□□ -0.63
POLR2J3-202ENST00000443430 TRAV23DV6A0A075B6W5 121 aa11.11□□□□□ -0.63
POLR2J3-202ENST00000443430 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-202ENST00000443430 LITAFQ99732 161 aa11.11□□□□□ -0.63
POLR2J3-202ENST00000443430 C20orf202A1L168 122 aa11.1□□□□□ -0.63
POLR2J3-202ENST00000443430 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-202ENST00000443430 HRCT1Q6UXD1 115 aa11.1□□□□□ -0.63
POLR2J3-202ENST00000443430 LINC00308Q8TCZ7 52 aa11.1□□□□□ -0.63
POLR2J3-202ENST00000443430 TIMM17BO60830 172 aa11.09□□□□□ -0.63
POLR2J3-202ENST00000443430 COX6B2Q6YFQ2 88 aa11.08□□□□□ -0.64
POLR2J3-202ENST00000443430 OR13C6PQ8NH95 151 aa11.08□□□□□ -0.64
POLR2J3-202ENST00000443430 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-202ENST00000443430 ATOH7Q8N100 152 aa11.07□□□□□ -0.64
POLR2J3-202ENST00000443430 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
POLR2J3-202ENST00000443430 C5orf52A6NGY3 159 aa11.05□□□□□ -0.64
POLR2J3-202ENST00000443430 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
POLR2J3-202ENST00000443430 SSPOA2VEC9 5147 aa11.05□□□□□ -0.64
POLR2J3-202ENST00000443430 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
POLR2J3-202ENST00000443430 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
POLR2J3-202ENST00000443430 SPRR1BP22528 89 aa11.03□□□□□ -0.64
POLR2J3-202ENST00000443430 HINT1P49773 126 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-202ENST00000443430 USH2AO75445 5202 aa11.02□□□□□ -0.65
POLR2J3-202ENST00000443430 RPL37P61927 97 aaKnown RBP11□□□□□ -0.65
POLR2J3-202ENST00000443430 SPANXDQ9BXN6 97 aa11□□□□□ -0.65
POLR2J3-202ENST00000443430 S100A2P29034 98 aa10.98□□□□□ -0.65
POLR2J3-202ENST00000443430 SLC25A34Q6PIV7 304 aa10.98□□□□□ -0.65
POLR2J3-202ENST00000443430 AKR1D1P51857 326 aa10.97□□□□□ -0.65
POLR2J3-202ENST00000443430 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
POLR2J3-202ENST00000443430 LINC00518Q8N0U6 118 aa10.97□□□□□ -0.65
POLR2J3-202ENST00000443430 HIST3H2BBQ8N257 126 aa10.96□□□□□ -0.65
POLR2J3-202ENST00000443430 CD164Q04900 197 aa10.95□□□□□ -0.66
POLR2J3-202ENST00000443430 LAMTOR3Q9UHA4 124 aa10.95□□□□□ -0.66
POLR2J3-202ENST00000443430 COPS9Q8WXC6 57 aa10.94□□□□□ -0.66
POLR2J3-202ENST00000443430 C6orf99Q4VX62 202 aa10.93□□□□□ -0.66
POLR2J3-202ENST00000443430 HIST1H2BLQ99880 126 aa10.93□□□□□ -0.66
POLR2J3-202ENST00000443430 H7C2G1 150 aa10.92□□□□□ -0.66
POLR2J3-202ENST00000443430 IFITM1P13164 125 aa10.92□□□□□ -0.66
POLR2J3-202ENST00000443430 COX7BP24311 80 aa10.92□□□□□ -0.66
POLR2J3-202ENST00000443430 C1orf195Q5TG92 126 aa10.92□□□□□ -0.66
POLR2J3-202ENST00000443430 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
POLR2J3-202ENST00000443430 S100A6P06703 90 aa10.91□□□□□ -0.66
POLR2J3-202ENST00000443430 Q5XG85 94 aa10.91□□□□□ -0.66
POLR2J3-202ENST00000443430 MUSTN1Q8IVN3 82 aa10.91□□□□□ -0.66
POLR2J3-202ENST00000443430 A6NDN8 102 aa10.9□□□□□ -0.66
POLR2J3-202ENST00000443430 ELOF1P60002 83 aaKnown RBP10.9□□□□□ -0.66
POLR2J3-202ENST00000443430 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.66
POLR2J3-202ENST00000443430 Q6ZVH6 145 aa10.9□□□□□ -0.66
POLR2J3-202ENST00000443430 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
POLR2J3-202ENST00000443430 HSBP1L1C9JCN9 74 aa10.88□□□□□ -0.67
POLR2J3-202ENST00000443430 Q1RN00 199 aa10.87□□□□□ -0.67
POLR2J3-202ENST00000443430 TAL2Q16559 108 aa10.84□□□□□ -0.67
POLR2J3-202ENST00000443430 DEFB105AQ8NG35 78 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms