RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 C22orf24Q9Y442 160 aa12.14□□□□□ -0.47
SNX17-203ENST00000440760 KMT2CQ8NEZ4 4911 aaKnown RBP12.14□□□□□ -0.47
SNX17-203ENST00000440760 IGLV5-37A0A075B6J1 123 aa12.14□□□□□ -0.47
SNX17-203ENST00000440760 RYR2Q92736 4967 aa12.13□□□□□ -0.47
SNX17-203ENST00000440760 A0A087WYN8 130 aa12.12□□□□□ -0.47
SNX17-203ENST00000440760 IGLV5-52A0A0A0MRZ9 124 aa12.12□□□□□ -0.47
SNX17-203ENST00000440760 RPL37AP8A6NKH3 93 aa12.12□□□□□ -0.47
SNX17-203ENST00000440760 C9JAW5 83 aa12.11□□□□□ -0.47
SNX17-203ENST00000440760 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
SNX17-203ENST00000440760 LINC01600Q96MT4 127 aa12.1□□□□□ -0.47
SNX17-203ENST00000440760 LINC00167Q96N53 147 aa12.1□□□□□ -0.47
SNX17-203ENST00000440760 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.1□□□□□ -0.47
SNX17-203ENST00000440760 PKD1P98161 4303 aa12.1□□□□□ -0.47
SNX17-203ENST00000440760 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
SNX17-203ENST00000440760 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
SNX17-203ENST00000440760 DIRC1Q969H9 104 aa12.09□□□□□ -0.47
SNX17-203ENST00000440760 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
SNX17-203ENST00000440760 H0YGX0 51 aa12.08□□□□□ -0.48
SNX17-203ENST00000440760 SLC25A20O43772 301 aa12.07□□□□□ -0.48
SNX17-203ENST00000440760 ANKRD29Q8N6D5 301 aa12.07□□□□□ -0.48
SNX17-203ENST00000440760 MT-ATP8P03928 68 aa12.07□□□□□ -0.48
SNX17-203ENST00000440760 IGLV1-50A0A075B6I6 118 aa12.06□□□□□ -0.48
SNX17-203ENST00000440760 XGP55808 180 aa12.06□□□□□ -0.48
SNX17-203ENST00000440760 SPACA4Q8TDM5 124 aa12.06□□□□□ -0.48
SNX17-203ENST00000440760 PHF5AQ7RTV0 110 aaKnown RBP12.05□□□□□ -0.48
SNX17-203ENST00000440760 KCNQ1DNQ9H478 68 aa12.05□□□□□ -0.48
SNX17-203ENST00000440760 TRACP01848 142 aa12.04□□□□□ -0.48
SNX17-203ENST00000440760 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
SNX17-203ENST00000440760 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
SNX17-203ENST00000440760 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
SNX17-203ENST00000440760 COX7BP24311 80 aa12.01□□□□□ -0.49
SNX17-203ENST00000440760 ELOF1P60002 83 aaKnown RBP12.01□□□□□ -0.49
SNX17-203ENST00000440760 LINC00575Q6W349 94 aa12.01□□□□□ -0.49
SNX17-203ENST00000440760 PRYO14603 147 aa12□□□□□ -0.49
SNX17-203ENST00000440760 DNAL4O96015 105 aa12□□□□□ -0.49
SNX17-203ENST00000440760 KRTAP11-1Q8IUC1 163 aa12□□□□□ -0.49
SNX17-203ENST00000440760 UBE2BP63146 152 aa11.97□□□□□ -0.49
SNX17-203ENST00000440760 LINC00528Q8N1L1 170 aa11.97□□□□□ -0.49
SNX17-203ENST00000440760 KRTAP4-16G5E9R7 235 aaPredicted RBP11.96□□□□□ -0.49
SNX17-203ENST00000440760 SPRR1AP35321 89 aa11.96□□□□□ -0.49
SNX17-203ENST00000440760 TRBV7-6A0A0J9YX20 115 aa11.96□□□□□ -0.5
SNX17-203ENST00000440760 hADV29S1A0JD25 119 aa11.96□□□□□ -0.5
SNX17-203ENST00000440760 REG3GQ6UW15 175 aa11.96□□□□□ -0.5
SNX17-203ENST00000440760 PKHD1P08F94 4074 aa11.96□□□□□ -0.5
SNX17-203ENST00000440760 H3BT86 120 aa11.95□□□□□ -0.5
SNX17-203ENST00000440760 ETDCA0A1B0GVM5 59 aa11.94□□□□□ -0.5
SNX17-203ENST00000440760 A0A1B0GX51 115 aa11.94□□□□□ -0.5
SNX17-203ENST00000440760 BAALC-AS2P0C853 105 aa11.94□□□□□ -0.5
SNX17-203ENST00000440760 B5MCH6 92 aa11.93□□□□□ -0.5
SNX17-203ENST00000440760 FAM30AQ9NZY2 134 aa11.93□□□□□ -0.5
SNX17-203ENST00000440760 Q6Q795 121 aa11.92□□□□□ -0.5
SNX17-203ENST00000440760 KRTAP10-1P60331 282 aa11.92□□□□□ -0.5
SNX17-203ENST00000440760 Q6ZRX8 168 aa11.92□□□□□ -0.5
SNX17-203ENST00000440760 EPM2AB3EWF7 344 aa11.91□□□□□ -0.5
SNX17-203ENST00000440760 Q6ZQY7 126 aa11.91□□□□□ -0.5
SNX17-203ENST00000440760 RYR3Q15413 4870 aa11.91□□□□□ -0.5
SNX17-203ENST00000440760 SNCGO76070 127 aa11.9□□□□□ -0.5
SNX17-203ENST00000440760 Q9BRP9 147 aa11.9□□□□□ -0.5
SNX17-203ENST00000440760 ANAPC13Q9BS18 74 aa11.9□□□□□ -0.5
SNX17-203ENST00000440760 PLAC8Q9NZF1 115 aa11.9□□□□□ -0.5
SNX17-203ENST00000440760 ORMDL1Q9P0S3 153 aa11.9□□□□□ -0.5
SNX17-203ENST00000440760 HAMPP81172 84 aa11.89□□□□□ -0.51
SNX17-203ENST00000440760 PRLHP81277 87 aa11.89□□□□□ -0.51
SNX17-203ENST00000440760 LINC00336Q6ZUF6 198 aa11.88□□□□□ -0.51
SNX17-203ENST00000440760 FAM19A1Q7Z5A9 133 aa11.88□□□□□ -0.51
SNX17-203ENST00000440760 TEX49A0A1B0GTD5 131 aa11.87□□□□□ -0.51
SNX17-203ENST00000440760 LRP1BQ9NZR2 4599 aa11.86□□□□□ -0.51
SNX17-203ENST00000440760 FAM240AA0A1B0GVK7 77 aa11.85□□□□□ -0.51
SNX17-203ENST00000440760 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
SNX17-203ENST00000440760 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
SNX17-203ENST00000440760 ERC2-IT1O76042 136 aa11.83□□□□□ -0.52
SNX17-203ENST00000440760 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.83□□□□□ -0.52
SNX17-203ENST00000440760 Q6ZSA8 131 aa11.83□□□□□ -0.52
SNX17-203ENST00000440760 NDUFV3P56181 108 aaKnown RBP11.83□□□□□ -0.52
SNX17-203ENST00000440760 SCXQ7RTU7 201 aa11.83□□□□□ -0.52
SNX17-203ENST00000440760 SMCR5Q8TEV8 140 aa11.83□□□□□ -0.52
SNX17-203ENST00000440760 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
SNX17-203ENST00000440760 A0A1B0GVY2 172 aa11.82□□□□□ -0.52
SNX17-203ENST00000440760 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
SNX17-203ENST00000440760 ST20-AS1Q8NBB2 130 aa11.81□□□□□ -0.52
SNX17-203ENST00000440760 HIGD2AQ9BW72 106 aa11.8□□□□□ -0.52
SNX17-203ENST00000440760 TMEM256-PLSCR3K7ERE1 68 aa11.79□□□□□ -0.52
SNX17-203ENST00000440760 PSORS1C2Q9UIG4 136 aa11.79□□□□□ -0.52
SNX17-203ENST00000440760 BCE1O60756 84 aa11.78□□□□□ -0.52
SNX17-203ENST00000440760 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
SNX17-203ENST00000440760 UBE2AP49459 152 aa11.78□□□□□ -0.52
SNX17-203ENST00000440760 SRRM2Q9UQ35 2752 aaKnown RBP11.77□□□□□ -0.53
SNX17-203ENST00000440760 ACYP1P07311 99 aa11.76□□□□□ -0.53
SNX17-203ENST00000440760 SVIPQ8NHG7 77 aa11.76□□□□□ -0.53
SNX17-203ENST00000440760 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
SNX17-203ENST00000440760 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
SNX17-203ENST00000440760 KRTAP13-1Q8IUC0 172 aa11.74□□□□□ -0.53
SNX17-203ENST00000440760 C14orf132Q9NPU4 83 aa11.74□□□□□ -0.53
SNX17-203ENST00000440760 Q8N377 158 aa11.73□□□□□ -0.53
SNX17-203ENST00000440760 LAMTOR3Q9UHA4 124 aa11.73□□□□□ -0.53
SNX17-203ENST00000440760 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
SNX17-203ENST00000440760 H0Y9J4 135 aa11.72□□□□□ -0.53
SNX17-203ENST00000440760 C3orf22Q8N5N4 141 aa11.72□□□□□ -0.53
SNX17-203ENST00000440760 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.53
SNX17-203ENST00000440760 IMUPQ9GZP8 106 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms