RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LINC01556Q5JQF7 62 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 KRTAP26-1Q6PEX3 210 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 Q8N814 137 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 LINC00526Q96FQ7 95 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 OBSCN-AS1Q96MR7 158 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 CAMK2N2Q96S95 79 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 C22orf24Q9Y442 160 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 SONP18583 2426 aaKnown RBP2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 UNC79Q9P2D8 2635 aa2.21□□□□□ -2.06
HMGB3P11-201ENST00000440127 ZFHX3Q15911 3703 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 IGKV2D-24A0A075B6R9 120 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 JMJD7-PLA2G4BH0Y9G9 81 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 H0Y9J4 135 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 TMEM256-PLSCR3K7ERE1 68 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 IGLV6-57P01721 117 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 RPL18AQ02543 176 aaKnown RBP2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 C6orf99Q4VX62 202 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 LINC00575Q6W349 94 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 LINC00643Q86TS7 51 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 TM2D3Q9BRN9 247 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 CCDC168Q8NDH2 2452 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 CHD6Q8TD26 2715 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 WNK1Q9H4A3 2382 aa2.2□□□□□ -2.06
HMGB3P11-201ENST00000440127 CRYBG3Q68DQ2 2970 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 ACANP16112 2415 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 FASNP49327 2511 aaKnown RBP2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 TRAV23DV6A0A075B6W5 121 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 TRBV7-6A0A0J9YX20 115 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 TRBV7-7A0A0K0K1E9 115 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 hADV29S1A0JD25 119 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 FAM168BA1KXE4 195 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 NDUFC2-KCTD14E9PQ53 114 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 H3BQ85 93 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 K7EIL1 84 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 M0R378 163 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 COX7BP24311 80 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 SYCNQ0VAF6 134 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 C9orf129Q5T035 196 aaKnown RBP2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 SDIM1Q6ZPB5 146 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 Q6ZRU5 148 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 C15orf56Q8N910 161 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 Q8NDZ9 215 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 RMI2Q96E14 147 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 ANAPC13Q9BS18 74 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 IMUPQ9GZP8 106 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 XAGE1AQ9HD64 81 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 C14orf132Q9NPU4 83 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 LINC00588Q9Y4M8 146 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 MAP1AP78559 2803 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 MYO9AB2RTY4 2548 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 TLN2Q9Y4G6 2542 aa2.19□□□□□ -2.06
HMGB3P11-201ENST00000440127 FN1P02751 2386 aaKnown RBP2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 ZNF73O43830 326 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 PRB2P02812 416 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 CCKP06307 115 aa2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 RBM3P98179 157 aaKnown RBP2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 SMCR5Q8TEV8 140 aa2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 CSMD2Q7Z408 3487 aa2.18□□□□□ -2.06
HMGB3P11-201ENST00000440127 SETXQ7Z333 2677 aaKnown RBP2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 PDE6GP18545 87 aa2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 Q6JHZ5 121 aa2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 UPK3BQ9BT76 320 aa2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 LAMTOR3Q9UHA4 124 aa2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 HELZ2Q9BYK8 2649 aaKnown RBP2.17□□□□□ -2.06
HMGB3P11-201ENST00000440127 AKAP9Q99996 3911 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 NBPF19A0A087WUL8 3843 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 ANK3Q12955 4377 aaKnown RBP2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 ITPR2Q14571 2701 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 TLX1NBP0CAT3 122 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 ELOF1P60002 83 aaKnown RBP2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 Q6ZQY7 126 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 DSCR8Q96T75 97 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 LINC00846Q9NV44 126 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 MTORP42345 2549 aa2.16□□□□□ -2.06
HMGB3P11-201ENST00000440127 GCN1Q92616 2671 aaKnown RBP2.15□□□□□ -2.06
HMGB3P11-201ENST00000440127 ZNF469Q96JG9 3925 aaPredicted RBP2.15□□□□□ -2.06
HMGB3P11-201ENST00000440127 C2CD3Q4AC94 2353 aa2.15□□□□□ -2.06
HMGB3P11-201ENST00000440127 HECTD1Q9ULT8 2610 aa2.15□□□□□ -2.06
HMGB3P11-201ENST00000440127 IGKV3D-7A0A0C4DH55 119 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 LOC107984640A0A0U1RRK4 108 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 FAM236AA0A1B0GUQ0 79 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 FAM236BA0A1B0GV22 79 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 CCDC179H3BU77 68 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 Q6ZQT0 140 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 UBL5Q9BZL1 73 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 KCNQ1DNQ9H478 68 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 V9GYY9 64 aa2.15□□□□□ -2.07
HMGB3P11-201ENST00000440127 OTOGQ6ZRI0 2925 aa2.14□□□□□ -2.07
HMGB3P11-201ENST00000440127 IGLV1-50A0A075B6I6 118 aa2.14□□□□□ -2.07
HMGB3P11-201ENST00000440127 MRPL55Q7Z7F7 128 aaKnown RBP2.14□□□□□ -2.07
HMGB3P11-201ENST00000440127 UBE2DNLQ8IWF7 75 aa2.14□□□□□ -2.07
HMGB3P11-201ENST00000440127 B9D2Q9BPU9 175 aa2.14□□□□□ -2.07
HMGB3P11-201ENST00000440127 APLNQ9ULZ1 77 aa2.14□□□□□ -2.07
HMGB3P11-201ENST00000440127 NF1P21359 2839 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms