RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
CDC42SE1-202ENST00000439374 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-202ENST00000439374 Q8NAQ8 132 aa6.68□□□□□ -1.34
CDC42SE1-202ENST00000439374 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
CDC42SE1-202ENST00000439374 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
CDC42SE1-202ENST00000439374 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-202ENST00000439374 A0A096LNI7 61 aa6.67□□□□□ -1.34
CDC42SE1-202ENST00000439374 LELP1Q5T871 98 aa6.67□□□□□ -1.34
CDC42SE1-202ENST00000439374 OBSCN-AS1Q96MR7 158 aa6.67□□□□□ -1.34
CDC42SE1-202ENST00000439374 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
CDC42SE1-202ENST00000439374 FUSP35637 526 aaKnown RBP eCLIP6.66□□□□□ -1.341e-7■■■□□ 14.6
CDC42SE1-202ENST00000439374 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
CDC42SE1-202ENST00000439374 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
CDC42SE1-202ENST00000439374 ATP5EP2Q5VTU8 51 aa6.66□□□□□ -1.34
CDC42SE1-202ENST00000439374 NDUFC2-KCTD14E9PQ53 114 aa6.65□□□□□ -1.34
CDC42SE1-202ENST00000439374 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.34
CDC42SE1-202ENST00000439374 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.35
CDC42SE1-202ENST00000439374 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.35
CDC42SE1-202ENST00000439374 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
CDC42SE1-202ENST00000439374 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
CDC42SE1-202ENST00000439374 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
CDC42SE1-202ENST00000439374 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
CDC42SE1-202ENST00000439374 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
CDC42SE1-202ENST00000439374 KRTAP10-11P60412 298 aa6.63□□□□□ -1.35
CDC42SE1-202ENST00000439374 ESRGQ1W209 222 aa6.63□□□□□ -1.35
CDC42SE1-202ENST00000439374 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
CDC42SE1-202ENST00000439374 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
CDC42SE1-202ENST00000439374 Q6ZRU5 148 aa6.62□□□□□ -1.35
CDC42SE1-202ENST00000439374 CSMD3Q7Z407 3707 aa6.62□□□□□ -1.35
CDC42SE1-202ENST00000439374 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
CDC42SE1-202ENST00000439374 PRYO14603 147 aa6.6□□□□□ -1.35
CDC42SE1-202ENST00000439374 UBE2BP63146 152 aa6.6□□□□□ -1.35
CDC42SE1-202ENST00000439374 KRTAP24-1Q3LI83 254 aa6.6□□□□□ -1.35
CDC42SE1-202ENST00000439374 ST20-AS1Q8NBB2 130 aa6.6□□□□□ -1.35
CDC42SE1-202ENST00000439374 SPTSSBQ8NFR3 76 aa6.6□□□□□ -1.35
CDC42SE1-202ENST00000439374 IGKV2-24A0A0C4DH68 120 aa6.59□□□□□ -1.35
CDC42SE1-202ENST00000439374 TENM2Q9NT68 2774 aa6.59□□□□□ -1.36
CDC42SE1-202ENST00000439374 COX17Q14061 63 aa6.57□□□□□ -1.36
CDC42SE1-202ENST00000439374 FAM168BA1KXE4 195 aa6.57□□□□□ -1.36
CDC42SE1-202ENST00000439374 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
CDC42SE1-202ENST00000439374 SYCNQ0VAF6 134 aa6.56□□□□□ -1.36
CDC42SE1-202ENST00000439374 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
CDC42SE1-202ENST00000439374 V9GYY9 64 aa6.56□□□□□ -1.36
CDC42SE1-202ENST00000439374 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-202ENST00000439374 PSCAO43653 123 aa6.55□□□□□ -1.36
CDC42SE1-202ENST00000439374 A8MU10 97 aa6.55□□□□□ -1.36
CDC42SE1-202ENST00000439374 ETDCA0A1B0GVM5 59 aa6.54□□□□□ -1.36
CDC42SE1-202ENST00000439374 IGLV6-57P01721 117 aa6.54□□□□□ -1.36
CDC42SE1-202ENST00000439374 RPL37AP61513 92 aaKnown RBP6.54□□□□□ -1.36
CDC42SE1-202ENST00000439374 CASC10Q5T4H9 136 aa6.54□□□□□ -1.36
CDC42SE1-202ENST00000439374 TRBV7-4A0A0J9YYF1 115 aa6.54□□□□□ -1.36
CDC42SE1-202ENST00000439374 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
CDC42SE1-202ENST00000439374 UBE2DNLQ8IWF7 75 aa6.53□□□□□ -1.36
CDC42SE1-202ENST00000439374 LOC110117498A0A087WWA1 95 aa6.53□□□□□ -1.36
CDC42SE1-202ENST00000439374 Q6ZRP5 223 aa6.53□□□□□ -1.36
CDC42SE1-202ENST00000439374 LINC00167Q96N53 147 aa6.53□□□□□ -1.36
CDC42SE1-202ENST00000439374 CXCL6P80162 114 aa6.52□□□□□ -1.37
CDC42SE1-202ENST00000439374 SERTAD4-AS1Q5TG53 156 aa6.52□□□□□ -1.37
CDC42SE1-202ENST00000439374 PRR34Q9NV39 138 aa6.52□□□□□ -1.37
CDC42SE1-202ENST00000439374 K7EQZ3 153 aa6.51□□□□□ -1.37
CDC42SE1-202ENST00000439374 C1orf137Q5JT78 98 aa6.51□□□□□ -1.37
CDC42SE1-202ENST00000439374 WIPF1O43516 503 aa6.51□□□□□ -1.37
CDC42SE1-202ENST00000439374 A8MUN3 132 aa6.51□□□□□ -1.37
CDC42SE1-202ENST00000439374 PDE6GP18545 87 aa6.51□□□□□ -1.37
CDC42SE1-202ENST00000439374 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
CDC42SE1-202ENST00000439374 ELOF1P60002 83 aaKnown RBP6.5□□□□□ -1.37
CDC42SE1-202ENST00000439374 SEC61GP60059 68 aa6.5□□□□□ -1.37
CDC42SE1-202ENST00000439374 M0R378 163 aa6.5□□□□□ -1.37
CDC42SE1-202ENST00000439374 VPREB1P12018 145 aa6.5□□□□□ -1.37
CDC42SE1-202ENST00000439374 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
CDC42SE1-202ENST00000439374 EGFEM1PQ0D2K5 195 aa6.49□□□□□ -1.37
CDC42SE1-202ENST00000439374 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
CDC42SE1-202ENST00000439374 PRLHP81277 87 aa6.49□□□□□ -1.37
CDC42SE1-202ENST00000439374 C7orf33Q8WU49 177 aa6.49□□□□□ -1.37
CDC42SE1-202ENST00000439374 ERC2-IT1O76042 136 aa6.48□□□□□ -1.37
CDC42SE1-202ENST00000439374 EPM2AB3EWF7 344 aa6.48□□□□□ -1.37
CDC42SE1-202ENST00000439374 NDUFC1O43677 76 aa6.47□□□□□ -1.37
CDC42SE1-202ENST00000439374 Q8N377 158 aa6.47□□□□□ -1.37
CDC42SE1-202ENST00000439374 A0A087WSZ3 146 aa6.47□□□□□ -1.37
CDC42SE1-202ENST00000439374 LINC00588Q9Y4M8 146 aa6.47□□□□□ -1.37
CDC42SE1-202ENST00000439374 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.37
CDC42SE1-202ENST00000439374 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
CDC42SE1-202ENST00000439374 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
CDC42SE1-202ENST00000439374 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
CDC42SE1-202ENST00000439374 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
CDC42SE1-202ENST00000439374 A0A1W2PNM2 257 aa6.45□□□□□ -1.38
CDC42SE1-202ENST00000439374 H0Y9J4 135 aa6.44□□□□□ -1.38
CDC42SE1-202ENST00000439374 LINC01556Q5JQF7 62 aa6.44□□□□□ -1.38
CDC42SE1-202ENST00000439374 NDUFS5O43920 106 aa6.43□□□□□ -1.38
CDC42SE1-202ENST00000439374 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
CDC42SE1-202ENST00000439374 TRAV22A0A0B4J277 110 aa6.41□□□□□ -1.38
CDC42SE1-202ENST00000439374 CHTF8P0CG12 524 aa6.41□□□□□ -1.38
CDC42SE1-202ENST00000439374 GVQW2A0A096LPI5 108 aaPredicted RBP6.4□□□□□ -1.39
CDC42SE1-202ENST00000439374 MP68P56378 58 aa6.4□□□□□ -1.39
CDC42SE1-202ENST00000439374 Q9BRP9 147 aa6.4□□□□□ -1.39
CDC42SE1-202ENST00000439374 K7EIL1 84 aa6.4□□□□□ -1.39
CDC42SE1-202ENST00000439374 A6NED7 52 aa6.39□□□□□ -1.39
CDC42SE1-202ENST00000439374 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE1-202ENST00000439374 KRTAP26-1Q6PEX3 210 aa6.38□□□□□ -1.39
CDC42SE1-202ENST00000439374 LINC00476Q8WZB0 136 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms