RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 NREPQ16612 68 aa6.95□□□□□ -1.3
CLSTN1-203ENST00000435891 Q6ZTC4 211 aa6.95□□□□□ -1.3
CLSTN1-203ENST00000435891 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
CLSTN1-203ENST00000435891 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-203ENST00000435891 Q6ZVQ6 151 aa6.94□□□□□ -1.3
CLSTN1-203ENST00000435891 ESRGQ1W209 222 aa6.94□□□□□ -1.3
CLSTN1-203ENST00000435891 IGLV6-57P01721 117 aa6.94□□□□□ -1.3
CLSTN1-203ENST00000435891 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
CLSTN1-203ENST00000435891 M0R2N4 97 aa6.93□□□□□ -1.3
CLSTN1-203ENST00000435891 ATP5EP56381 51 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-203ENST00000435891 PRR4Q16378 134 aa6.93□□□□□ -1.3
CLSTN1-203ENST00000435891 Q8N9L7 120 aa6.93□□□□□ -1.3
CLSTN1-203ENST00000435891 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
CLSTN1-203ENST00000435891 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
CLSTN1-203ENST00000435891 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
CLSTN1-203ENST00000435891 BPY2O14599 106 aa6.91□□□□□ -1.3
CLSTN1-203ENST00000435891 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
CLSTN1-203ENST00000435891 Q6ZQY7 126 aa6.91□□□□□ -1.3
CLSTN1-203ENST00000435891 Q6ZRU5 148 aa6.9□□□□□ -1.3
CLSTN1-203ENST00000435891 C15orf56Q8N910 161 aa6.9□□□□□ -1.31
CLSTN1-203ENST00000435891 CAMK2N2Q96S95 79 aa6.9□□□□□ -1.31
CLSTN1-203ENST00000435891 ZNF561-AS1K7EIQ3 104 aa6.89□□□□□ -1.31
CLSTN1-203ENST00000435891 NBEAL1Q6ZS30 2694 aa6.89□□□□□ -1.31
CLSTN1-203ENST00000435891 PRYO14603 147 aa6.89□□□□□ -1.31
CLSTN1-203ENST00000435891 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
CLSTN1-203ENST00000435891 MUC7Q8TAX7 377 aa6.88□□□□□ -1.31
CLSTN1-203ENST00000435891 HIGD2AQ9BW72 106 aa6.88□□□□□ -1.31
CLSTN1-203ENST00000435891 Q6ZQT0 140 aa6.88□□□□□ -1.31
CLSTN1-203ENST00000435891 VPREB1P12018 145 aa6.87□□□□□ -1.31
CLSTN1-203ENST00000435891 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-203ENST00000435891 DNAH3Q8TD57 4116 aa6.86□□□□□ -1.31
CLSTN1-203ENST00000435891 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
CLSTN1-203ENST00000435891 KRTAP24-1Q3LI83 254 aa6.86□□□□□ -1.31
CLSTN1-203ENST00000435891 COL6A5A8TX70 2615 aa6.86□□□□□ -1.31
CLSTN1-203ENST00000435891 H3BNG1 76 aa6.86□□□□□ -1.31
CLSTN1-203ENST00000435891 BCE1O60756 84 aa6.86□□□□□ -1.31
CLSTN1-203ENST00000435891 Q6ZRP5 223 aa6.85□□□□□ -1.31
CLSTN1-203ENST00000435891 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
CLSTN1-203ENST00000435891 DEFB131BA0A096LNP1 70 aa6.84□□□□□ -1.31
CLSTN1-203ENST00000435891 TRBV7-4A0A0J9YYF1 115 aa6.84□□□□□ -1.31
CLSTN1-203ENST00000435891 EGFEM1PQ0D2K5 195 aa6.84□□□□□ -1.31
CLSTN1-203ENST00000435891 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
CLSTN1-203ENST00000435891 FAM30AQ9NZY2 134 aa6.83□□□□□ -1.32
CLSTN1-203ENST00000435891 COX7BP24311 80 aa6.83□□□□□ -1.32
CLSTN1-203ENST00000435891 LOC110117498A0A087WWA1 95 aa6.83□□□□□ -1.32
CLSTN1-203ENST00000435891 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
CLSTN1-203ENST00000435891 BAHCC1Q9P281 2608 aa6.82□□□□□ -1.32
CLSTN1-203ENST00000435891 CXCL6P80162 114 aa6.82□□□□□ -1.32
CLSTN1-203ENST00000435891 CD164Q04900 197 aa6.82□□□□□ -1.32
CLSTN1-203ENST00000435891 C11orf45Q8TAV5 145 aa6.82□□□□□ -1.32
CLSTN1-203ENST00000435891 LINC01556Q5JQF7 62 aa6.81□□□□□ -1.32
CLSTN1-203ENST00000435891 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
CLSTN1-203ENST00000435891 LYSTQ99698 3801 aa6.81□□□□□ -1.32
CLSTN1-203ENST00000435891 HUWE1Q7Z6Z7 4374 aaKnown RBP6.81□□□□□ -1.32
CLSTN1-203ENST00000435891 M0R378 163 aa6.81□□□□□ -1.32
CLSTN1-203ENST00000435891 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
CLSTN1-203ENST00000435891 PRR15Q8IV56 129 aa6.8□□□□□ -1.32
CLSTN1-203ENST00000435891 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
CLSTN1-203ENST00000435891 SERTAD4-AS1Q5TG53 156 aa6.8□□□□□ -1.32
CLSTN1-203ENST00000435891 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
CLSTN1-203ENST00000435891 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
CLSTN1-203ENST00000435891 PDE6GP18545 87 aa6.79□□□□□ -1.32
CLSTN1-203ENST00000435891 SYCNQ0VAF6 134 aa6.79□□□□□ -1.32
CLSTN1-203ENST00000435891 A8MUN3 132 aa6.78□□□□□ -1.32
CLSTN1-203ENST00000435891 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
CLSTN1-203ENST00000435891 MGAM2Q2M2H8 2515 aa6.77□□□□□ -1.33
CLSTN1-203ENST00000435891 C1orf64Q8NEQ6 169 aa6.77□□□□□ -1.33
CLSTN1-203ENST00000435891 FAM168BA1KXE4 195 aa6.76□□□□□ -1.33
CLSTN1-203ENST00000435891 DNAH10OSP0CZ25 163 aa6.76□□□□□ -1.33
CLSTN1-203ENST00000435891 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
CLSTN1-203ENST00000435891 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
CLSTN1-203ENST00000435891 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
CLSTN1-203ENST00000435891 DEFB105AQ8NG35 78 aa6.75□□□□□ -1.33
CLSTN1-203ENST00000435891 A8MU10 97 aa6.75□□□□□ -1.33
CLSTN1-203ENST00000435891 COL7A1Q02388 2944 aa6.75□□□□□ -1.33
CLSTN1-203ENST00000435891 STAB2Q8WWQ8 2551 aa6.75□□□□□ -1.33
CLSTN1-203ENST00000435891 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
CLSTN1-203ENST00000435891 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
CLSTN1-203ENST00000435891 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
CLSTN1-203ENST00000435891 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
CLSTN1-203ENST00000435891 SMIM29Q86T20 159 aa6.73□□□□□ -1.33
CLSTN1-203ENST00000435891 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
CLSTN1-203ENST00000435891 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
CLSTN1-203ENST00000435891 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
CLSTN1-203ENST00000435891 H3BQ85 93 aa6.72□□□□□ -1.33
CLSTN1-203ENST00000435891 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
CLSTN1-203ENST00000435891 TENM2Q9NT68 2774 aa6.71□□□□□ -1.33
CLSTN1-203ENST00000435891 Q8N377 158 aa6.71□□□□□ -1.33
CLSTN1-203ENST00000435891 UBE2BP63146 152 aa6.71□□□□□ -1.34
CLSTN1-203ENST00000435891 Q9BRP9 147 aa6.7□□□□□ -1.34
CLSTN1-203ENST00000435891 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
CLSTN1-203ENST00000435891 ERC2-IT1O76042 136 aa6.7□□□□□ -1.34
CLSTN1-203ENST00000435891 A6NED7 52 aa6.69□□□□□ -1.34
CLSTN1-203ENST00000435891 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
CLSTN1-203ENST00000435891 PRR15LQ9BU68 103 aa6.69□□□□□ -1.34
CLSTN1-203ENST00000435891 KRTAP4-16G5E9R7 235 aaPredicted RBP6.69□□□□□ -1.34
CLSTN1-203ENST00000435891 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
CLSTN1-203ENST00000435891 ST20-AS1Q8NBB2 130 aa6.68□□□□□ -1.34
CLSTN1-203ENST00000435891 K7EIL1 84 aa6.68□□□□□ -1.34
CLSTN1-203ENST00000435891 Q1T7F1 81 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms