RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LYSTQ99698 3801 aa9.01□□□□□ -0.97
HOXC4-202ENST00000430889 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
HOXC4-202ENST00000430889 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
HOXC4-202ENST00000430889 STAB2Q8WWQ8 2551 aa8.99□□□□□ -0.97
HOXC4-202ENST00000430889 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
HOXC4-202ENST00000430889 PLECQ15149 4684 aaKnown RBP8.99□□□□□ -0.97
HOXC4-202ENST00000430889 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
HOXC4-202ENST00000430889 SPRR1AP35321 89 aa8.98□□□□□ -0.97
HOXC4-202ENST00000430889 HIST1H4AP62805 103 aaKnown RBP8.98□□□□□ -0.97
HOXC4-202ENST00000430889 LAMTOR3Q9UHA4 124 aa8.98□□□□□ -0.97
HOXC4-202ENST00000430889 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 FAM236BA0A1B0GV22 79 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 CSMD3Q7Z407 3707 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 LOC107984640A0A0U1RRK4 108 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 GHRHP01286 108 aa8.97□□□□□ -0.97
HOXC4-202ENST00000430889 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.98
HOXC4-202ENST00000430889 M0R2N4 97 aa8.96□□□□□ -0.98
HOXC4-202ENST00000430889 PRYO14603 147 aa8.96□□□□□ -0.98
HOXC4-202ENST00000430889 PDE6GP18545 87 aa8.95□□□□□ -0.98
HOXC4-202ENST00000430889 IGKV3D-7A0A0C4DH55 119 aa8.94□□□□□ -0.98
HOXC4-202ENST00000430889 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
HOXC4-202ENST00000430889 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
HOXC4-202ENST00000430889 DSCR8Q96T75 97 aa8.94□□□□□ -0.98
HOXC4-202ENST00000430889 B5MCH6 92 aa8.93□□□□□ -0.98
HOXC4-202ENST00000430889 CCDC179H3BU77 68 aa8.92□□□□□ -0.98
HOXC4-202ENST00000430889 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
HOXC4-202ENST00000430889 Q6ZRX8 168 aa8.92□□□□□ -0.98
HOXC4-202ENST00000430889 Q9BRP9 147 aa8.91□□□□□ -0.98
HOXC4-202ENST00000430889 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
HOXC4-202ENST00000430889 RPL37AP8A6NKH3 93 aa8.91□□□□□ -0.98
HOXC4-202ENST00000430889 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
HOXC4-202ENST00000430889 UBE2DNLQ8IWF7 75 aa8.9□□□□□ -0.98
HOXC4-202ENST00000430889 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
HOXC4-202ENST00000430889 DHRS4-AS1Q9P1J3 65 aa8.9□□□□□ -0.98
HOXC4-202ENST00000430889 STARD9Q9P2P6 4700 aa8.9□□□□□ -0.99
HOXC4-202ENST00000430889 FAM19A5Q7Z5A7 132 aaPredicted RBP8.89□□□□□ -0.99
HOXC4-202ENST00000430889 Q8N377 158 aa8.89□□□□□ -0.99
HOXC4-202ENST00000430889 A0A096LNI7 61 aa8.88□□□□□ -0.99
HOXC4-202ENST00000430889 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
HOXC4-202ENST00000430889 A0A087WVE0 104 aa8.87□□□□□ -0.99
HOXC4-202ENST00000430889 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
HOXC4-202ENST00000430889 Q6ZVQ6 151 aa8.87□□□□□ -0.99
HOXC4-202ENST00000430889 PRKDCP78527 4128 aaKnown RBP8.87□□□□□ -0.99
HOXC4-202ENST00000430889 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
HOXC4-202ENST00000430889 LRCOL1A6NCL2 159 aa8.86□□□□□ -0.99
HOXC4-202ENST00000430889 Q6ZRN7 208 aaPredicted RBP8.86□□□□□ -0.99
HOXC4-202ENST00000430889 FBN3Q75N90 2809 aa8.86□□□□□ -0.99
HOXC4-202ENST00000430889 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
HOXC4-202ENST00000430889 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
HOXC4-202ENST00000430889 NBDYA0A0U1RRE5 68 aa8.85□□□□□ -0.99
HOXC4-202ENST00000430889 ATOX1O00244 68 aa8.85□□□□□ -0.99
HOXC4-202ENST00000430889 PSCAO43653 123 aa8.85□□□□□ -0.99
HOXC4-202ENST00000430889 TNP2Q05952 138 aa8.85□□□□□ -0.99
HOXC4-202ENST00000430889 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
HOXC4-202ENST00000430889 REG3GQ6UW15 175 aa8.83□□□□□ -1
HOXC4-202ENST00000430889 FAM19A1Q7Z5A9 133 aa8.83□□□□□ -1
HOXC4-202ENST00000430889 ERC2-IT1O76042 136 aa8.82□□□□□ -1
HOXC4-202ENST00000430889 CXCL6P80162 114 aa8.81□□□□□ -1
HOXC4-202ENST00000430889 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
HOXC4-202ENST00000430889 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
HOXC4-202ENST00000430889 UQCRQO14949 82 aa8.8□□□□□ -1
HOXC4-202ENST00000430889 COX7CP15954 63 aa8.8□□□□□ -1
HOXC4-202ENST00000430889 C9orf163Q8N9P6 203 aa8.8□□□□□ -1
HOXC4-202ENST00000430889 DEFB105AQ8NG35 78 aa8.8□□□□□ -1
HOXC4-202ENST00000430889 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.79□□□□□ -1
HOXC4-202ENST00000430889 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
HOXC4-202ENST00000430889 TENM2Q9NT68 2774 aa8.79□□□□□ -1
HOXC4-202ENST00000430889 CHTF8P0CG12 524 aa8.76□□□□□ -1.01
HOXC4-202ENST00000430889 HAMPP81172 84 aa8.76□□□□□ -1.01
HOXC4-202ENST00000430889 SMIM29Q86T20 159 aa8.76□□□□□ -1.01
HOXC4-202ENST00000430889 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
HOXC4-202ENST00000430889 UBE2BP63146 152 aa8.75□□□□□ -1.01
HOXC4-202ENST00000430889 SERP2Q8N6R1 65 aa8.75□□□□□ -1.01
HOXC4-202ENST00000430889 A0A1B0GW54 56 aa8.75□□□□□ -1.01
HOXC4-202ENST00000430889 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
HOXC4-202ENST00000430889 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
HOXC4-202ENST00000430889 HECTD4Q9Y4D8 3996 aa8.74□□□□□ -1.01
HOXC4-202ENST00000430889 DNAH17Q9UFH2 4485 aa8.74□□□□□ -1.01
HOXC4-202ENST00000430889 EPM2AB3EWF7 344 aa8.73□□□□□ -1.01
HOXC4-202ENST00000430889 BCE1O60756 84 aa8.73□□□□□ -1.01
HOXC4-202ENST00000430889 CRYGAP11844 174 aa8.73□□□□□ -1.01
HOXC4-202ENST00000430889 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
HOXC4-202ENST00000430889 H0Y9J4 135 aa8.72□□□□□ -1.01
HOXC4-202ENST00000430889 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
HOXC4-202ENST00000430889 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
HOXC4-202ENST00000430889 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
HOXC4-202ENST00000430889 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
HOXC4-202ENST00000430889 MEGF8Q7Z7M0 2845 aa8.71□□□□□ -1.01
HOXC4-202ENST00000430889 DNAH6Q9C0G6 4158 aa8.71□□□□□ -1.02
HOXC4-202ENST00000430889 PANO1I0J062 215 aa8.71□□□□□ -1.02
HOXC4-202ENST00000430889 PRLHP81277 87 aa8.71□□□□□ -1.02
HOXC4-202ENST00000430889 Q8NBF4 154 aa8.71□□□□□ -1.02
HOXC4-202ENST00000430889 Q6ZR54 194 aa8.7□□□□□ -1.02
HOXC4-202ENST00000430889 IGLV8-61A0A075B6I0 122 aa8.69□□□□□ -1.02
HOXC4-202ENST00000430889 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
HOXC4-202ENST00000430889 LINC00474Q9P2X8 69 aa8.69□□□□□ -1.02
HOXC4-202ENST00000430889 DNAH2Q9P225 4427 aa8.69□□□□□ -1.02
HOXC4-202ENST00000430889 C3orf84H3BNL1 204 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms