RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 RPS29P62273 56 aaKnown RBP9.09□□□□□ -0.95
PTPRA-206ENST00000430705 S100A12P80511 92 aa9.09□□□□□ -0.95
PTPRA-206ENST00000430705 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
PTPRA-206ENST00000430705 SLC7A5P1Q8MH63 180 aa9.09□□□□□ -0.95
PTPRA-206ENST00000430705 E9PLD3 99 aa9.08□□□□□ -0.96
PTPRA-206ENST00000430705 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
PTPRA-206ENST00000430705 LITAFQ99732 161 aa9.08□□□□□ -0.96
PTPRA-206ENST00000430705 MIEN1Q9BRT3 115 aa9.08□□□□□ -0.96
PTPRA-206ENST00000430705 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
PTPRA-206ENST00000430705 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
PTPRA-206ENST00000430705 ZNF73O43830 326 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-206ENST00000430705 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
PTPRA-206ENST00000430705 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
PTPRA-206ENST00000430705 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
PTPRA-206ENST00000430705 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
PTPRA-206ENST00000430705 SLC25A20O43772 301 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BKO60814 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BJP06899 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BOP23527 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BBP33778 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BDP58876 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BCP62807 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST2H2BEQ16778 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-206ENST00000430705 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BHQ93079 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BNQ99877 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 HIST1H2BMQ99879 126 aa9.01□□□□□ -0.97
PTPRA-206ENST00000430705 LINC01545Q5VT33 79 aa9□□□□□ -0.97
PTPRA-206ENST00000430705 TTTY13Q9BZ97 58 aa9□□□□□ -0.97
PTPRA-206ENST00000430705 XP32Q5T750 250 aa8.99□□□□□ -0.97
PTPRA-206ENST00000430705 SPANXCQ9NY87 97 aa8.99□□□□□ -0.97
PTPRA-206ENST00000430705 TIMM17BO60830 172 aa8.98□□□□□ -0.97
PTPRA-206ENST00000430705 SPRR1BP22528 89 aa8.98□□□□□ -0.97
PTPRA-206ENST00000430705 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
PTPRA-206ENST00000430705 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
PTPRA-206ENST00000430705 ZNF815PA8K554 130 aa8.95□□□□□ -0.98
PTPRA-206ENST00000430705 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
PTPRA-206ENST00000430705 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
PTPRA-206ENST00000430705 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
PTPRA-206ENST00000430705 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
PTPRA-206ENST00000430705 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
PTPRA-206ENST00000430705 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
PTPRA-206ENST00000430705 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
PTPRA-206ENST00000430705 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
PTPRA-206ENST00000430705 DHRS4-AS1Q9P1J3 65 aa8.91□□□□□ -0.98
PTPRA-206ENST00000430705 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
PTPRA-206ENST00000430705 HINT1P49773 126 aaPredicted RBP8.9□□□□□ -0.98
PTPRA-206ENST00000430705 KRTAP19-2Q3LHN2 52 aa8.9□□□□□ -0.98
PTPRA-206ENST00000430705 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
PTPRA-206ENST00000430705 COX7BP24311 80 aa8.89□□□□□ -0.99
PTPRA-206ENST00000430705 LINC01547P58512 204 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-206ENST00000430705 ANKRD39Q53RE8 183 aa8.88□□□□□ -0.99
PTPRA-206ENST00000430705 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
PTPRA-206ENST00000430705 SMIM29Q86T20 159 aa8.87□□□□□ -0.99
PTPRA-206ENST00000430705 Q1RN00 199 aa8.86□□□□□ -0.99
PTPRA-206ENST00000430705 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
PTPRA-206ENST00000430705 LAMTOR3Q9UHA4 124 aa8.86□□□□□ -0.99
PTPRA-206ENST00000430705 KRTDAPP60985 99 aa8.85□□□□□ -0.99
PTPRA-206ENST00000430705 SLC25A34Q6PIV7 304 aa8.85□□□□□ -0.99
PTPRA-206ENST00000430705 LINC00518Q8N0U6 118 aa8.85□□□□□ -0.99
PTPRA-206ENST00000430705 C9orf92A6NGG3 77 aa8.84□□□□□ -0.99
PTPRA-206ENST00000430705 A0A0G2JQZ4 141 aa8.83□□□□□ -1
PTPRA-206ENST00000430705 DEFB105AQ8NG35 78 aa8.83□□□□□ -1
PTPRA-206ENST00000430705 IGLV5-48A0A075B6I7 105 aa8.82□□□□□ -1
PTPRA-206ENST00000430705 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
PTPRA-206ENST00000430705 PCOTHQ58A44 107 aa8.82□□□□□ -1
PTPRA-206ENST00000430705 ATOH7Q8N100 152 aa8.82□□□□□ -1
PTPRA-206ENST00000430705 TEX49A0A1B0GTD5 131 aa8.81□□□□□ -1
PTPRA-206ENST00000430705 H7C2G1 150 aa8.81□□□□□ -1
PTPRA-206ENST00000430705 CD164Q04900 197 aa8.81□□□□□ -1
PTPRA-206ENST00000430705 TAL2Q16559 108 aa8.81□□□□□ -1
PTPRA-206ENST00000430705 SCGB1D4Q6XE38 83 aa8.81□□□□□ -1
PTPRA-206ENST00000430705 PCP2Q8IVA1 136 aa8.81□□□□□ -1
PTPRA-206ENST00000430705 PRO1933Q9H354 126 aa8.8□□□□□ -1
PTPRA-206ENST00000430705 A0A1B0GWB2 263 aa8.79□□□□□ -1
PTPRA-206ENST00000430705 MUSTN1Q8IVN3 82 aa8.79□□□□□ -1
PTPRA-206ENST00000430705 IFITM1P13164 125 aa8.78□□□□□ -1
PTPRA-206ENST00000430705 Q5XG85 94 aa8.78□□□□□ -1
PTPRA-206ENST00000430705 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-206ENST00000430705 MT1HP80294 61 aa8.77□□□□□ -1.01
PTPRA-206ENST00000430705 C1orf195Q5TG92 126 aa8.77□□□□□ -1.01
PTPRA-206ENST00000430705 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
PTPRA-206ENST00000430705 A6NDN8 102 aa8.76□□□□□ -1.01
PTPRA-206ENST00000430705 C20orf202A1L168 122 aa8.75□□□□□ -1.01
PTPRA-206ENST00000430705 Q6ZVH6 145 aa8.75□□□□□ -1.01
PTPRA-206ENST00000430705 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
PTPRA-206ENST00000430705 AKR1D1P51857 326 aa8.73□□□□□ -1.01
PTPRA-206ENST00000430705 COPS9Q8WXC6 57 aa8.73□□□□□ -1.01
PTPRA-206ENST00000430705 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
PTPRA-206ENST00000430705 TRAV13-2A0A0B4J235 113 aa8.69□□□□□ -1.02
PTPRA-206ENST00000430705 A4D1N5 150 aa8.69□□□□□ -1.02
PTPRA-206ENST00000430705 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
PTPRA-206ENST00000430705 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
PTPRA-206ENST00000430705 NHP2Q9NX24 153 aaKnown RBP8.66□□□□□ -1.02
PTPRA-206ENST00000430705 LINC00575Q6W349 94 aa8.65□□□□□ -1.02
PTPRA-206ENST00000430705 HIST1H2BLQ99880 126 aa8.65□□□□□ -1.02
PTPRA-206ENST00000430705 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
PTPRA-206ENST00000430705 SNRPEP62304 92 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms