RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 LITAFQ99732 161 aa9.54□□□□□ -0.88
CPSF4-203ENST00000430038 HERVK_113P61574 105 aa9.53□□□□□ -0.88
CPSF4-203ENST00000430038 TRAV23DV6A0A075B6W5 121 aa9.52□□□□□ -0.89
CPSF4-203ENST00000430038 E9PLD3 99 aa9.52□□□□□ -0.89
CPSF4-203ENST00000430038 ASB16-AS1Q495Z4 193 aa9.52□□□□□ -0.89
CPSF4-203ENST00000430038 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
CPSF4-203ENST00000430038 ZNF73O43830 326 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-203ENST00000430038 MIEN1Q9BRT3 115 aa9.51□□□□□ -0.89
CPSF4-203ENST00000430038 S100A12P80511 92 aa9.5□□□□□ -0.89
CPSF4-203ENST00000430038 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
CPSF4-203ENST00000430038 SYS1-DBNDD2H3BUS1 97 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BKO60814 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BJP06899 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BOP23527 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BBP33778 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BDP58876 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 RPS29P62273 56 aaKnown RBP9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BCP62807 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST2H2BEQ16778 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-203ENST00000430038 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
CPSF4-203ENST00000430038 SLC25A20O43772 301 aa9.44□□□□□ -0.9
CPSF4-203ENST00000430038 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-203ENST00000430038 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
CPSF4-203ENST00000430038 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
CPSF4-203ENST00000430038 XP32Q5T750 250 aa9.42□□□□□ -0.9
CPSF4-203ENST00000430038 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
CPSF4-203ENST00000430038 SPRR1BP22528 89 aa9.41□□□□□ -0.9
CPSF4-203ENST00000430038 TIMM17BO60830 172 aa9.4□□□□□ -0.9
CPSF4-203ENST00000430038 OR13C6PQ8NH95 151 aa9.4□□□□□ -0.9
CPSF4-203ENST00000430038 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
CPSF4-203ENST00000430038 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
CPSF4-203ENST00000430038 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
CPSF4-203ENST00000430038 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
CPSF4-203ENST00000430038 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
CPSF4-203ENST00000430038 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
CPSF4-203ENST00000430038 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
CPSF4-203ENST00000430038 ELOF1P60002 83 aaKnown RBP9.36□□□□□ -0.91
CPSF4-203ENST00000430038 KRTAP19-2Q3LHN2 52 aa9.35□□□□□ -0.91
CPSF4-203ENST00000430038 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
CPSF4-203ENST00000430038 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
CPSF4-203ENST00000430038 HINT1P49773 126 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-203ENST00000430038 DHRS4-AS1Q9P1J3 65 aa9.34□□□□□ -0.91
CPSF4-203ENST00000430038 KRTAP9-6A0A140TA67 174 aa9.33□□□□□ -0.92
CPSF4-203ENST00000430038 COX7BP24311 80 aa9.33□□□□□ -0.92
CPSF4-203ENST00000430038 ANKRD39Q53RE8 183 aa9.33□□□□□ -0.92
CPSF4-203ENST00000430038 SMIM29Q86T20 159 aa9.33□□□□□ -0.92
CPSF4-203ENST00000430038 A0A0G2JQZ4 141 aa9.32□□□□□ -0.92
CPSF4-203ENST00000430038 Q1RN00 199 aa9.32□□□□□ -0.92
CPSF4-203ENST00000430038 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
CPSF4-203ENST00000430038 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-203ENST00000430038 KRTDAPP60985 99 aa9.31□□□□□ -0.92
CPSF4-203ENST00000430038 COA6Q5JTJ3 125 aaKnown RBP9.31□□□□□ -0.92
CPSF4-203ENST00000430038 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
CPSF4-203ENST00000430038 CBY1Q9Y3M2 126 aa9.3□□□□□ -0.92
CPSF4-203ENST00000430038 LINC00518Q8N0U6 118 aa9.29□□□□□ -0.92
CPSF4-203ENST00000430038 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
CPSF4-203ENST00000430038 LAMTOR3Q9UHA4 124 aa9.29□□□□□ -0.92
CPSF4-203ENST00000430038 TAL2Q16559 108 aa9.28□□□□□ -0.92
CPSF4-203ENST00000430038 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
CPSF4-203ENST00000430038 H7C2G1 150 aa9.27□□□□□ -0.93
CPSF4-203ENST00000430038 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
CPSF4-203ENST00000430038 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
CPSF4-203ENST00000430038 SLC25A34Q6PIV7 304 aa9.26□□□□□ -0.93
CPSF4-203ENST00000430038 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
CPSF4-203ENST00000430038 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
CPSF4-203ENST00000430038 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
CPSF4-203ENST00000430038 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
CPSF4-203ENST00000430038 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
CPSF4-203ENST00000430038 A6NDN8 102 aa9.22□□□□□ -0.93
CPSF4-203ENST00000430038 CD164Q04900 197 aa9.22□□□□□ -0.93
CPSF4-203ENST00000430038 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-203ENST00000430038 C1orf195Q5TG92 126 aa9.22□□□□□ -0.93
CPSF4-203ENST00000430038 PRO1933Q9H354 126 aa9.22□□□□□ -0.93
CPSF4-203ENST00000430038 A0A1B0GWB2 263 aa9.21□□□□□ -0.94
CPSF4-203ENST00000430038 IFITM1P13164 125 aa9.21□□□□□ -0.94
CPSF4-203ENST00000430038 IGLV8-61A0A075B6I0 122 aa9.2□□□□□ -0.94
CPSF4-203ENST00000430038 MT1HP80294 61 aa9.2□□□□□ -0.94
CPSF4-203ENST00000430038 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
CPSF4-203ENST00000430038 Q5XG85 94 aa9.19□□□□□ -0.94
CPSF4-203ENST00000430038 AKR1D1P51857 326 aa9.18□□□□□ -0.94
CPSF4-203ENST00000430038 Q6ZVH6 145 aa9.17□□□□□ -0.94
CPSF4-203ENST00000430038 FSIP2Q5CZC0 6907 aa9.15□□□□□ -0.94
CPSF4-203ENST00000430038 C20orf202A1L168 122 aa9.15□□□□□ -0.94
CPSF4-203ENST00000430038 FLGP20930 4061 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-203ENST00000430038 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
CPSF4-203ENST00000430038 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
CPSF4-203ENST00000430038 A4D1N5 150 aa9.1□□□□□ -0.95
CPSF4-203ENST00000430038 HIST3H2BBQ8N257 126 aa9.1□□□□□ -0.95
CPSF4-203ENST00000430038 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
CPSF4-203ENST00000430038 LINC00575Q6W349 94 aa9.09□□□□□ -0.95
CPSF4-203ENST00000430038 HIST1H2BLQ99880 126 aa9.09□□□□□ -0.95
CPSF4-203ENST00000430038 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-203ENST00000430038 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
CPSF4-203ENST00000430038 SNRPEP62304 92 aaKnown RBP9.05□□□□□ -0.96
CPSF4-203ENST00000430038 Q6ZQY7 126 aa9.05□□□□□ -0.96
CPSF4-203ENST00000430038 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms