RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 FAM19A5Q7Z5A7 132 aaPredicted RBP12.72□□□□□ -0.37
CASC4-203ENST00000429162 IGLV1-50A0A075B6I6 118 aa12.72□□□□□ -0.37
CASC4-203ENST00000429162 MRPL55Q7Z7F7 128 aaKnown RBP12.71□□□□□ -0.37
CASC4-203ENST00000429162 KRTAP7-1Q8IUC3 87 aa12.71□□□□□ -0.37
CASC4-203ENST00000429162 LYSTQ99698 3801 aa12.7□□□□□ -0.38
CASC4-203ENST00000429162 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
CASC4-203ENST00000429162 PLECQ15149 4684 aaKnown RBP12.7□□□□□ -0.38
CASC4-203ENST00000429162 LOC110117498A0A087WWA1 95 aa12.69□□□□□ -0.38
CASC4-203ENST00000429162 RPL37AP8A6NKH3 93 aa12.69□□□□□ -0.38
CASC4-203ENST00000429162 IMUPQ9GZP8 106 aa12.68□□□□□ -0.38
CASC4-203ENST00000429162 LINC00846Q9NV44 126 aa12.68□□□□□ -0.38
CASC4-203ENST00000429162 SPRR1AP35321 89 aa12.68□□□□□ -0.38
CASC4-203ENST00000429162 CSMD3Q7Z407 3707 aa12.68□□□□□ -0.38
CASC4-203ENST00000429162 A0A096LNI7 61 aa12.67□□□□□ -0.38
CASC4-203ENST00000429162 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
CASC4-203ENST00000429162 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 DSCR8Q96T75 97 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 DHRS4-AS1Q9P1J3 65 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 DNAH10Q8IVF4 4471 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 KRTAP4-16G5E9R7 235 aaPredicted RBP12.66□□□□□ -0.38
CASC4-203ENST00000429162 PDE6GP18545 87 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 Q6ZQT0 140 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 Q6ZRX8 168 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
CASC4-203ENST00000429162 DNAH7Q8WXX0 4024 aa12.65□□□□□ -0.39
CASC4-203ENST00000429162 B5MCH6 92 aa12.64□□□□□ -0.39
CASC4-203ENST00000429162 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
CASC4-203ENST00000429162 LRCOL1A6NCL2 159 aa12.64□□□□□ -0.39
CASC4-203ENST00000429162 IGKV2-24A0A0C4DH68 120 aa12.63□□□□□ -0.39
CASC4-203ENST00000429162 Q6ZRN7 208 aaPredicted RBP12.63□□□□□ -0.39
CASC4-203ENST00000429162 NDUFV3P56181 108 aaKnown RBP12.62□□□□□ -0.39
CASC4-203ENST00000429162 Q6JHZ5 121 aa12.62□□□□□ -0.39
CASC4-203ENST00000429162 MEGF8Q7Z7M0 2845 aa12.6□□□□□ -0.39
CASC4-203ENST00000429162 REG3GQ6UW15 175 aa12.6□□□□□ -0.39
CASC4-203ENST00000429162 C9orf163Q8N9P6 203 aa12.59□□□□□ -0.39
CASC4-203ENST00000429162 ANAPC13Q9BS18 74 aa12.59□□□□□ -0.39
CASC4-203ENST00000429162 TRBV7-4A0A0J9YYF1 115 aa12.58□□□□□ -0.39
CASC4-203ENST00000429162 Q9BRP9 147 aa12.58□□□□□ -0.39
CASC4-203ENST00000429162 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
CASC4-203ENST00000429162 STARD9Q9P2P6 4700 aa12.58□□□□□ -0.4
CASC4-203ENST00000429162 A0A1W2PNN7 141 aa12.57□□□□□ -0.4
CASC4-203ENST00000429162 UBL5Q9BZL1 73 aa12.56□□□□□ -0.4
CASC4-203ENST00000429162 M0R2N4 97 aa12.56□□□□□ -0.4
CASC4-203ENST00000429162 ATP5EP2Q5VTU8 51 aa12.55□□□□□ -0.4
CASC4-203ENST00000429162 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
CASC4-203ENST00000429162 IGKV3D-7A0A0C4DH55 119 aa12.53□□□□□ -0.4
CASC4-203ENST00000429162 UBE2BP63146 152 aa12.53□□□□□ -0.4
CASC4-203ENST00000429162 Q8N377 158 aa12.53□□□□□ -0.4
CASC4-203ENST00000429162 LINC01547P58512 204 aaPredicted RBP12.52□□□□□ -0.4
CASC4-203ENST00000429162 LINC00474Q9P2X8 69 aa12.52□□□□□ -0.4
CASC4-203ENST00000429162 FAM236AA0A1B0GUQ0 79 aa12.52□□□□□ -0.41
CASC4-203ENST00000429162 FAM236BA0A1B0GV22 79 aa12.52□□□□□ -0.41
CASC4-203ENST00000429162 CHTF8P0CG12 524 aa12.52□□□□□ -0.41
CASC4-203ENST00000429162 IGLV5-48A0A075B6I7 105 aa12.5□□□□□ -0.41
CASC4-203ENST00000429162 TENM2Q9NT68 2774 aa12.5□□□□□ -0.41
CASC4-203ENST00000429162 Q6ZR54 194 aa12.49□□□□□ -0.41
CASC4-203ENST00000429162 A0A087WTM6 91 aa12.48□□□□□ -0.41
CASC4-203ENST00000429162 ST20-AS1Q8NBB2 130 aa12.47□□□□□ -0.41
CASC4-203ENST00000429162 FAM19A1Q7Z5A9 133 aa12.47□□□□□ -0.41
CASC4-203ENST00000429162 ERC2-IT1O76042 136 aa12.46□□□□□ -0.42
CASC4-203ENST00000429162 PHF5AQ7RTV0 110 aaKnown RBP12.46□□□□□ -0.42
CASC4-203ENST00000429162 Q6ZVQ6 151 aa12.44□□□□□ -0.42
CASC4-203ENST00000429162 PRLHP81277 87 aa12.42□□□□□ -0.42
CASC4-203ENST00000429162 HIST1H4AP62805 103 aaKnown RBP12.41□□□□□ -0.42
CASC4-203ENST00000429162 C3orf22Q8N5N4 141 aa12.41□□□□□ -0.42
CASC4-203ENST00000429162 TNP2Q05952 138 aa12.41□□□□□ -0.42
CASC4-203ENST00000429162 SPACA4Q8TDM5 124 aa12.39□□□□□ -0.43
CASC4-203ENST00000429162 H0Y9J4 135 aa12.38□□□□□ -0.43
CASC4-203ENST00000429162 PANO1I0J062 215 aa12.38□□□□□ -0.43
CASC4-203ENST00000429162 A0A087WVE0 104 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 RTL8CO15255 209 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 HAMPP81172 84 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 C1orf134Q5TEV5 83 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 HIGD2AQ9BW72 106 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 DPH3Q96FX2 82 aa12.37□□□□□ -0.43
CASC4-203ENST00000429162 ATOX1O00244 68 aa12.36□□□□□ -0.43
CASC4-203ENST00000429162 CXCL6P80162 114 aa12.36□□□□□ -0.43
CASC4-203ENST00000429162 C1orf137Q5JT78 98 aa12.36□□□□□ -0.43
CASC4-203ENST00000429162 A0A1B0GW54 56 aa12.35□□□□□ -0.43
CASC4-203ENST00000429162 LY6G6CO95867 125 aa12.35□□□□□ -0.43
CASC4-203ENST00000429162 F8WEM9 126 aa12.35□□□□□ -0.43
CASC4-203ENST00000429162 FUSP35637 526 aaKnown RBP eCLIP12.35□□□□□ -0.43
CASC4-203ENST00000429162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.35□□□□□ -0.43
CASC4-203ENST00000429162 EPM2AB3EWF7 344 aa12.34□□□□□ -0.43
CASC4-203ENST00000429162 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
CASC4-203ENST00000429162 SMIM29Q86T20 159 aa12.33□□□□□ -0.44
CASC4-203ENST00000429162 UBE2AP49459 152 aa12.33□□□□□ -0.44
CASC4-203ENST00000429162 FBN3Q75N90 2809 aa12.32□□□□□ -0.44
CASC4-203ENST00000429162 CCDC179H3BU77 68 aa12.31□□□□□ -0.44
CASC4-203ENST00000429162 BCE1O60756 84 aa12.31□□□□□ -0.44
CASC4-203ENST00000429162 LINC00476Q8WZB0 136 aa12.31□□□□□ -0.44
CASC4-203ENST00000429162 Q8NBF4 154 aa12.31□□□□□ -0.44
CASC4-203ENST00000429162 DNAH2Q9P225 4427 aa12.3□□□□□ -0.44
CASC4-203ENST00000429162 A0A1W2PNM2 257 aa12.29□□□□□ -0.44
CASC4-203ENST00000429162 C3orf84H3BNL1 204 aa12.29□□□□□ -0.44
CASC4-203ENST00000429162 NREPQ16612 68 aa12.29□□□□□ -0.44
CASC4-203ENST00000429162 DNAH17Q9UFH2 4485 aa12.28□□□□□ -0.44
CASC4-203ENST00000429162 IGLV5-52A0A0A0MRZ9 124 aa12.28□□□□□ -0.44
CASC4-203ENST00000429162 DNAH6Q9C0G6 4158 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms