RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SMIM11BQ8TCY0 68 aa4.92□□□□□ -1.62
CNOT4-206ENST00000428680 K7EP34 96 aa4.92□□□□□ -1.62
CNOT4-206ENST00000428680 UBE2V1Q13404 147 aa4.92□□□□□ -1.62
CNOT4-206ENST00000428680 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
CNOT4-206ENST00000428680 DNAH1Q9P2D7 4330 aa4.91□□□□□ -1.62
CNOT4-206ENST00000428680 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
CNOT4-206ENST00000428680 CELSR2Q9HCU4 2923 aa4.91□□□□□ -1.62
CNOT4-206ENST00000428680 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.62
CNOT4-206ENST00000428680 J3KT08 172 aa4.9□□□□□ -1.62
CNOT4-206ENST00000428680 GAS8-AS1O95177 125 aa4.9□□□□□ -1.62
CNOT4-206ENST00000428680 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
CNOT4-206ENST00000428680 DLEU1O43261 78 aa4.9□□□□□ -1.63
CNOT4-206ENST00000428680 LINC00304Q8N9R0 145 aa4.9□□□□□ -1.63
CNOT4-206ENST00000428680 C10orf91Q5T1B1 145 aa4.9□□□□□ -1.63
CNOT4-206ENST00000428680 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
CNOT4-206ENST00000428680 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
CNOT4-206ENST00000428680 Q8N814 137 aa4.89□□□□□ -1.63
CNOT4-206ENST00000428680 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
CNOT4-206ENST00000428680 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
CNOT4-206ENST00000428680 TNP2Q05952 138 aa4.89□□□□□ -1.63
CNOT4-206ENST00000428680 NF1P21359 2839 aa4.88□□□□□ -1.63
CNOT4-206ENST00000428680 BCE1O60756 84 aa4.88□□□□□ -1.63
CNOT4-206ENST00000428680 COA6Q5JTJ3 125 aaKnown RBP4.88□□□□□ -1.63
CNOT4-206ENST00000428680 LRBAP50851 2863 aa4.88□□□□□ -1.63
CNOT4-206ENST00000428680 SPINK1P00995 79 aa4.88□□□□□ -1.63
CNOT4-206ENST00000428680 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
CNOT4-206ENST00000428680 Q8NBF4 154 aa4.88□□□□□ -1.63
CNOT4-206ENST00000428680 NDUFC2O95298 119 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 C6orf48Q9UBA6 75 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 IGHV3OR16-9A0A0B4J2B5 98 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 A0A0U1RQV1 116 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 M0R2T5 61 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 ENHOQ6UWT2 76 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 Q8N3U1 123 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
CNOT4-206ENST00000428680 GVQW2A0A096LPI5 108 aaPredicted RBP4.86□□□□□ -1.63
CNOT4-206ENST00000428680 C9orf163Q8N9P6 203 aa4.86□□□□□ -1.63
CNOT4-206ENST00000428680 AMELXQ99217 191 aa4.86□□□□□ -1.63
CNOT4-206ENST00000428680 TACC2O95359 2948 aa4.86□□□□□ -1.63
CNOT4-206ENST00000428680 TRIAP1O43715 76 aa4.85□□□□□ -1.63
CNOT4-206ENST00000428680 ATOX1O00244 68 aa4.85□□□□□ -1.63
CNOT4-206ENST00000428680 COX8CQ7Z4L0 72 aa4.85□□□□□ -1.63
CNOT4-206ENST00000428680 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
CNOT4-206ENST00000428680 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
CNOT4-206ENST00000428680 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
CNOT4-206ENST00000428680 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
CNOT4-206ENST00000428680 DEFB116Q30KQ4 102 aa4.84□□□□□ -1.63
CNOT4-206ENST00000428680 ZNF575Q86XF7 245 aa4.84□□□□□ -1.63
CNOT4-206ENST00000428680 HRNRQ86YZ3 2850 aaPredicted RBP4.84□□□□□ -1.64
CNOT4-206ENST00000428680 LINC01547P58512 204 aaPredicted RBP4.84□□□□□ -1.64
CNOT4-206ENST00000428680 Q9UF83 564 aa4.84□□□□□ -1.64
CNOT4-206ENST00000428680 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
CNOT4-206ENST00000428680 A8MTW9 85 aa4.83□□□□□ -1.64
CNOT4-206ENST00000428680 B5MCH6 92 aa4.83□□□□□ -1.64
CNOT4-206ENST00000428680 ATP5EP2Q5VTU8 51 aa4.83□□□□□ -1.64
CNOT4-206ENST00000428680 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
CNOT4-206ENST00000428680 Q96NJ1 140 aa4.83□□□□□ -1.64
CNOT4-206ENST00000428680 ZNF861PO60384 105 aa4.82□□□□□ -1.64
CNOT4-206ENST00000428680 LINC00643Q86TS7 51 aa4.82□□□□□ -1.64
CNOT4-206ENST00000428680 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
CNOT4-206ENST00000428680 LINC00313P59037 77 aa4.81□□□□□ -1.64
CNOT4-206ENST00000428680 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
CNOT4-206ENST00000428680 WFDC2Q14508 124 aa4.8□□□□□ -1.64
CNOT4-206ENST00000428680 PSORS1C2Q9UIG4 136 aa4.8□□□□□ -1.64
CNOT4-206ENST00000428680 MT-ATP8P03928 68 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 FAM19A4Q96LR4 140 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 MXRA5Q9NR99 2828 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 SDIM1Q6ZPB5 146 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 KIAA0087Q14695 138 aa4.79□□□□□ -1.64
CNOT4-206ENST00000428680 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
CNOT4-206ENST00000428680 IGLV7-43P04211 117 aa4.78□□□□□ -1.64
CNOT4-206ENST00000428680 IMUPQ9GZP8 106 aa4.78□□□□□ -1.64
CNOT4-206ENST00000428680 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
CNOT4-206ENST00000428680 PCP4P48539 62 aa4.77□□□□□ -1.65
CNOT4-206ENST00000428680 Q6ZRX8 168 aa4.77□□□□□ -1.65
CNOT4-206ENST00000428680 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
CNOT4-206ENST00000428680 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
CNOT4-206ENST00000428680 C20orf197Q8N268 126 aa4.77□□□□□ -1.65
CNOT4-206ENST00000428680 Q6ZSA8 131 aa4.76□□□□□ -1.65
CNOT4-206ENST00000428680 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
CNOT4-206ENST00000428680 GIG44P09565 113 aaPredicted RBP4.76□□□□□ -1.65
CNOT4-206ENST00000428680 Q5VSD8 79 aa4.76□□□□□ -1.65
CNOT4-206ENST00000428680 ST20-AS1Q8NBB2 130 aa4.76□□□□□ -1.65
CNOT4-206ENST00000428680 TAX1BP3O14907 124 aa4.76□□□□□ -1.65
CNOT4-206ENST00000428680 FAM168BA1KXE4 195 aa4.75□□□□□ -1.65
CNOT4-206ENST00000428680 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
CNOT4-206ENST00000428680 IGLV5-37A0A075B6J1 123 aa4.74□□□□□ -1.65
CNOT4-206ENST00000428680 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
CNOT4-206ENST00000428680 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
CNOT4-206ENST00000428680 IGLV1-50A0A075B6I6 118 aa4.74□□□□□ -1.65
CNOT4-206ENST00000428680 PRR34Q9NV39 138 aa4.73□□□□□ -1.65
CNOT4-206ENST00000428680 TSPEAR-AS2P59090 65 aa4.73□□□□□ -1.65
CNOT4-206ENST00000428680 CNBPP62633 177 aaKnown RBP4.72□□□□□ -1.65
CNOT4-206ENST00000428680 LINC00612Q8N6U2 182 aa4.72□□□□□ -1.65
CNOT4-206ENST00000428680 LOC105371267A0A1B0GV96 52 aa4.71□□□□□ -1.65
CNOT4-206ENST00000428680 DNAH3Q8TD57 4116 aa4.71□□□□□ -1.65
CNOT4-206ENST00000428680 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms