RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 S100A6P06703 90 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 HIST3H2BBQ8N257 126 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 TYMSOSQ8TAI1 123 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 MIEN1Q9BRT3 115 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 E9PLD3 99 aa5.43□□□□□ -1.54
RFX3-AS1-202ENST00000427722 SNRPEP62304 92 aaKnown RBP5.43□□□□□ -1.54
RFX3-AS1-202ENST00000427722 A0A0J9YXY3 114 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 TSPAN13O95857 204 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 NPC2P61916 151 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 LINC01545Q5VT33 79 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 HIST1H2BLQ99880 126 aa5.42□□□□□ -1.54
RFX3-AS1-202ENST00000427722 ETDCA0A1B0GVM5 59 aa5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 C3orf79P0CE67 100 aa5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 KRTDAPP60985 99 aa5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 S100A12P80511 92 aa5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 PRR4Q16378 134 aa5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 KCNQ1DNQ9H478 68 aa5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 SPANXB1Q9NS25 103 aaPredicted RBP5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 TMA7Q9Y2S6 64 aaKnown RBP5.41□□□□□ -1.54
RFX3-AS1-202ENST00000427722 LOC107984156A0A0G2JMH3 177 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 S100A2P29034 98 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 DDTP30046 118 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 SPRR1AP35321 89 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 SOSTDC1Q6X4U4 206 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 ARL17AQ8IVW1 177 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
RFX3-AS1-202ENST00000427722 TRBV10-2A0A0K0K1G8 114 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 C20orf202A1L168 122 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 ZNF815PA8K554 130 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 S100A7L2Q5SY68 101 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 ADAMTSL4-AS1Q5T5F5 129 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
RFX3-AS1-202ENST00000427722 NDUFC2O95298 119 aa5.38□□□□□ -1.55
RFX3-AS1-202ENST00000427722 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
RFX3-AS1-202ENST00000427722 C3orf22Q8N5N4 141 aa5.38□□□□□ -1.55
RFX3-AS1-202ENST00000427722 TTTY13Q9BZ97 58 aa5.38□□□□□ -1.55
RFX3-AS1-202ENST00000427722 B5MCH6 92 aa5.37□□□□□ -1.55
RFX3-AS1-202ENST00000427722 SMCR5Q8TEV8 140 aa5.37□□□□□ -1.55
RFX3-AS1-202ENST00000427722 LITAFQ99732 161 aa5.37□□□□□ -1.55
RFX3-AS1-202ENST00000427722 PPDPFQ9H3Y8 114 aa5.37□□□□□ -1.55
RFX3-AS1-202ENST00000427722 TRAV23DV6A0A075B6W5 121 aa5.36□□□□□ -1.55
RFX3-AS1-202ENST00000427722 TIMM17BO60830 172 aa5.36□□□□□ -1.55
RFX3-AS1-202ENST00000427722 IGLV6-57P01721 117 aa5.36□□□□□ -1.55
RFX3-AS1-202ENST00000427722 ATOH7Q8N100 152 aa5.36□□□□□ -1.55
RFX3-AS1-202ENST00000427722 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
RFX3-AS1-202ENST00000427722 Q6ZRX8 168 aa5.35□□□□□ -1.55
RFX3-AS1-202ENST00000427722 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
RFX3-AS1-202ENST00000427722 RETNLBQ9BQ08 111 aa5.35□□□□□ -1.55
RFX3-AS1-202ENST00000427722 SPANXCQ9NY87 97 aa5.35□□□□□ -1.55
RFX3-AS1-202ENST00000427722 ZNF73O43830 326 aaPredicted RBP5.34□□□□□ -1.55
RFX3-AS1-202ENST00000427722 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
RFX3-AS1-202ENST00000427722 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
RFX3-AS1-202ENST00000427722 SCGB1D4Q6XE38 83 aa5.34□□□□□ -1.55
RFX3-AS1-202ENST00000427722 OR13C6PQ8NH95 151 aa5.34□□□□□ -1.55
RFX3-AS1-202ENST00000427722 Q9BRP9 147 aa5.34□□□□□ -1.55
RFX3-AS1-202ENST00000427722 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
RFX3-AS1-202ENST00000427722 Q8NBF4 154 aa5.32□□□□□ -1.56
RFX3-AS1-202ENST00000427722 CBY1Q9Y3M2 126 aa5.32□□□□□ -1.56
RFX3-AS1-202ENST00000427722 LPAP08519 4548 aa5.32□□□□□ -1.56
RFX3-AS1-202ENST00000427722 IGLV9-49A0A0B4J1Y8 123 aa5.31□□□□□ -1.56
RFX3-AS1-202ENST00000427722 AKR1D1P51857 326 aa5.31□□□□□ -1.56
RFX3-AS1-202ENST00000427722 MOBPQ13875 183 aa5.31□□□□□ -1.56
RFX3-AS1-202ENST00000427722 JOSD1Q15040 202 aaPredicted RBP5.31□□□□□ -1.56
RFX3-AS1-202ENST00000427722 PCP2Q8IVA1 136 aa5.31□□□□□ -1.56
RFX3-AS1-202ENST00000427722 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
RFX3-AS1-202ENST00000427722 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
RFX3-AS1-202ENST00000427722 SPAG11AQ6PDA7 123 aa5.3□□□□□ -1.56
RFX3-AS1-202ENST00000427722 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
RFX3-AS1-202ENST00000427722 ST20-AS1Q8NBB2 130 aa5.29□□□□□ -1.56
RFX3-AS1-202ENST00000427722 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
RFX3-AS1-202ENST00000427722 C6orf99Q4VX62 202 aa5.28□□□□□ -1.56
RFX3-AS1-202ENST00000427722 PYY3Q5JQD4 70 aa5.28□□□□□ -1.56
RFX3-AS1-202ENST00000427722 C9orf153Q5TBE3 101 aa5.28□□□□□ -1.56
RFX3-AS1-202ENST00000427722 LINC00518Q8N0U6 118 aa5.28□□□□□ -1.56
RFX3-AS1-202ENST00000427722 COPS9Q8WXC6 57 aa5.28□□□□□ -1.56
RFX3-AS1-202ENST00000427722 LOC105371267A0A1B0GV96 52 aa5.27□□□□□ -1.57
RFX3-AS1-202ENST00000427722 HSBP1L1C9JCN9 74 aa5.27□□□□□ -1.57
RFX3-AS1-202ENST00000427722 IFITM1P13164 125 aa5.27□□□□□ -1.57
RFX3-AS1-202ENST00000427722 CTAG1AP78358 180 aa5.27□□□□□ -1.57
RFX3-AS1-202ENST00000427722 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
RFX3-AS1-202ENST00000427722 COX7BP24311 80 aa5.26□□□□□ -1.57
RFX3-AS1-202ENST00000427722 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
RFX3-AS1-202ENST00000427722 Q6ZVH6 145 aa5.26□□□□□ -1.57
RFX3-AS1-202ENST00000427722 A6NDN8 102 aa5.25□□□□□ -1.57
RFX3-AS1-202ENST00000427722 SPINK1P00995 79 aa5.25□□□□□ -1.57
RFX3-AS1-202ENST00000427722 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
RFX3-AS1-202ENST00000427722 MUSTN1Q8IVN3 82 aa5.25□□□□□ -1.57
RFX3-AS1-202ENST00000427722 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
RFX3-AS1-202ENST00000427722 SSBP3-AS1Q7Z2R9 100 aa5.24□□□□□ -1.57
RFX3-AS1-202ENST00000427722 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
RFX3-AS1-202ENST00000427722 SLC25A34Q6PIV7 304 aa5.22□□□□□ -1.57
RFX3-AS1-202ENST00000427722 DEFB105AQ8NG35 78 aa5.22□□□□□ -1.57
RFX3-AS1-202ENST00000427722 VAMP8Q9BV40 100 aa5.22□□□□□ -1.57
RFX3-AS1-202ENST00000427722 PAM16Q9Y3D7 125 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms