RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 NUPR2A6NF83 97 aa9.03□□□□□ -0.96
APOBEC3D-202ENST00000427494 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
APOBEC3D-202ENST00000427494 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
APOBEC3D-202ENST00000427494 GHRHP01286 108 aa9.02□□□□□ -0.97
APOBEC3D-202ENST00000427494 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3D-202ENST00000427494 KRTAP7-1Q8IUC3 87 aa9.01□□□□□ -0.97
APOBEC3D-202ENST00000427494 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
APOBEC3D-202ENST00000427494 PRYO14603 147 aa9.01□□□□□ -0.97
APOBEC3D-202ENST00000427494 Q6ZQT0 140 aa9.01□□□□□ -0.97
APOBEC3D-202ENST00000427494 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
APOBEC3D-202ENST00000427494 DSCR8Q96T75 97 aa8.99□□□□□ -0.97
APOBEC3D-202ENST00000427494 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
APOBEC3D-202ENST00000427494 Q6JHZ5 121 aa8.99□□□□□ -0.97
APOBEC3D-202ENST00000427494 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
APOBEC3D-202ENST00000427494 LYSTQ99698 3801 aa8.99□□□□□ -0.97
APOBEC3D-202ENST00000427494 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
APOBEC3D-202ENST00000427494 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
APOBEC3D-202ENST00000427494 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.97□□□□□ -0.97
APOBEC3D-202ENST00000427494 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
APOBEC3D-202ENST00000427494 FAM236BA0A1B0GV22 79 aa8.97□□□□□ -0.97
APOBEC3D-202ENST00000427494 C14orf177Q52M58 125 aa8.97□□□□□ -0.97
APOBEC3D-202ENST00000427494 A0A096LNI7 61 aa8.96□□□□□ -0.98
APOBEC3D-202ENST00000427494 NBDYA0A0U1RRE5 68 aa8.96□□□□□ -0.98
APOBEC3D-202ENST00000427494 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
APOBEC3D-202ENST00000427494 Q6ZRX8 168 aa8.96□□□□□ -0.98
APOBEC3D-202ENST00000427494 B5MCH6 92 aa8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 PDE6GP18545 87 aa8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 SPRR1AP35321 89 aa8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 C16orf90A8MZG2 172 aa8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
APOBEC3D-202ENST00000427494 M0R2N4 97 aa8.94□□□□□ -0.98
APOBEC3D-202ENST00000427494 CSMD3Q7Z407 3707 aa8.94□□□□□ -0.98
APOBEC3D-202ENST00000427494 TRBV7-4A0A0J9YYF1 115 aa8.93□□□□□ -0.98
APOBEC3D-202ENST00000427494 DEFB105AQ8NG35 78 aa8.93□□□□□ -0.98
APOBEC3D-202ENST00000427494 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
APOBEC3D-202ENST00000427494 Q9BRP9 147 aa8.93□□□□□ -0.98
APOBEC3D-202ENST00000427494 REG3GQ6UW15 175 aa8.91□□□□□ -0.98
APOBEC3D-202ENST00000427494 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
APOBEC3D-202ENST00000427494 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
APOBEC3D-202ENST00000427494 ATP5EP2Q5VTU8 51 aa8.9□□□□□ -0.98
APOBEC3D-202ENST00000427494 DNAH10Q8IVF4 4471 aa8.9□□□□□ -0.98
APOBEC3D-202ENST00000427494 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.98
APOBEC3D-202ENST00000427494 Q8N377 158 aa8.9□□□□□ -0.99
APOBEC3D-202ENST00000427494 LINC01547P58512 204 aaPredicted RBP8.88□□□□□ -0.99
APOBEC3D-202ENST00000427494 UBE2BP63146 152 aa8.88□□□□□ -0.99
APOBEC3D-202ENST00000427494 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
APOBEC3D-202ENST00000427494 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
APOBEC3D-202ENST00000427494 A0A087WVE0 104 aa8.87□□□□□ -0.99
APOBEC3D-202ENST00000427494 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
APOBEC3D-202ENST00000427494 CCDC179H3BU77 68 aa8.86□□□□□ -0.99
APOBEC3D-202ENST00000427494 HIST1H4AP62805 103 aaKnown RBP8.86□□□□□ -0.99
APOBEC3D-202ENST00000427494 Q6ZVQ6 151 aa8.86□□□□□ -0.99
APOBEC3D-202ENST00000427494 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
APOBEC3D-202ENST00000427494 TENM2Q9NT68 2774 aa8.86□□□□□ -0.99
APOBEC3D-202ENST00000427494 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
APOBEC3D-202ENST00000427494 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
APOBEC3D-202ENST00000427494 PKIGQ9Y2B9 76 aa8.84□□□□□ -0.99
APOBEC3D-202ENST00000427494 PLECQ15149 4684 aaKnown RBP8.84□□□□□ -0.99
APOBEC3D-202ENST00000427494 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
APOBEC3D-202ENST00000427494 HAMPP81172 84 aa8.83□□□□□ -1
APOBEC3D-202ENST00000427494 FAM19A1Q7Z5A9 133 aa8.83□□□□□ -1
APOBEC3D-202ENST00000427494 PRKDCP78527 4128 aaKnown RBP8.83□□□□□ -1
APOBEC3D-202ENST00000427494 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
APOBEC3D-202ENST00000427494 MEGF8Q7Z7M0 2845 aa8.82□□□□□ -1
APOBEC3D-202ENST00000427494 ATOX1O00244 68 aa8.82□□□□□ -1
APOBEC3D-202ENST00000427494 PRLHP81277 87 aa8.81□□□□□ -1
APOBEC3D-202ENST00000427494 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
APOBEC3D-202ENST00000427494 STARD9Q9P2P6 4700 aa8.79□□□□□ -1
APOBEC3D-202ENST00000427494 TNP2Q05952 138 aa8.79□□□□□ -1
APOBEC3D-202ENST00000427494 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
APOBEC3D-202ENST00000427494 CXCL6P80162 114 aa8.78□□□□□ -1
APOBEC3D-202ENST00000427494 A0A087WTM6 91 aa8.77□□□□□ -1
APOBEC3D-202ENST00000427494 C1orf137Q5JT78 98 aa8.77□□□□□ -1
APOBEC3D-202ENST00000427494 HIGD2AQ9BW72 106 aa8.77□□□□□ -1
APOBEC3D-202ENST00000427494 PANO1I0J062 215 aa8.77□□□□□ -1.01
APOBEC3D-202ENST00000427494 C3orf84H3BNL1 204 aa8.76□□□□□ -1.01
APOBEC3D-202ENST00000427494 Q6ZR54 194 aa8.76□□□□□ -1.01
APOBEC3D-202ENST00000427494 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
APOBEC3D-202ENST00000427494 SCXQ7RTU7 201 aa8.75□□□□□ -1.01
APOBEC3D-202ENST00000427494 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
APOBEC3D-202ENST00000427494 FUSP35637 526 aaKnown RBP eCLIP8.75□□□□□ -1.01
APOBEC3D-202ENST00000427494 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
APOBEC3D-202ENST00000427494 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
APOBEC3D-202ENST00000427494 COX7CP15954 63 aa8.74□□□□□ -1.01
APOBEC3D-202ENST00000427494 NREPQ16612 68 aa8.74□□□□□ -1.01
APOBEC3D-202ENST00000427494 EPM2AB3EWF7 344 aa8.73□□□□□ -1.01
APOBEC3D-202ENST00000427494 F8WEM9 126 aa8.73□□□□□ -1.01
APOBEC3D-202ENST00000427494 UQCRQO14949 82 aa8.73□□□□□ -1.01
APOBEC3D-202ENST00000427494 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
APOBEC3D-202ENST00000427494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
APOBEC3D-202ENST00000427494 H0Y9J4 135 aa8.72□□□□□ -1.01
APOBEC3D-202ENST00000427494 UBE2AP49459 152 aa8.72□□□□□ -1.01
APOBEC3D-202ENST00000427494 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
APOBEC3D-202ENST00000427494 Q8NBF4 154 aa8.72□□□□□ -1.01
APOBEC3D-202ENST00000427494 RTL8CO15255 209 aa8.71□□□□□ -1.02
APOBEC3D-202ENST00000427494 LINC00476Q8WZB0 136 aa8.71□□□□□ -1.02
APOBEC3D-202ENST00000427494 A0A1B0GW54 56 aa8.7□□□□□ -1.02
APOBEC3D-202ENST00000427494 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms