RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 LECT2O14960 151 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 LEPROTO15243 131 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 NUPR1O60356 82 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 C3orf79P0CE67 100 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
HDAC9-209ENST00000425071 LGALS3P17931 250 aaKnown RBP2.1□□□□□ -2.07
HDAC9-209ENST00000425071 SDIM1Q6ZPB5 146 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 HIST3H2BBQ8N257 126 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 PKD1P98161 4303 aa2.1□□□□□ -2.07
HDAC9-209ENST00000425071 HYDINQ4G0P3 5121 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 J3QQQ9 107 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 SPINK8P0C7L1 97 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 LINC00158P58513 81 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 MEIG1Q5JSS6 88 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 Q5W150 140 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 BOD1L2Q8IYS8 172 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 HIST1H2BLQ99880 126 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 MIEN1Q9BRT3 115 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
HDAC9-209ENST00000425071 DNAH11Q96DT5 4516 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 IGLV1-50A0A075B6I6 118 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 A0A1B0GVX0 72 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 TIMM17BO60830 172 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 RPL18AQ02543 176 aaKnown RBP2.08□□□□□ -2.08
HDAC9-209ENST00000425071 JOSD1Q15040 202 aaPredicted RBP2.08□□□□□ -2.08
HDAC9-209ENST00000425071 MAJINQ3KP22 176 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 UNQ6190/PRO20217Q6UXQ8 127 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 Q6ZRU5 148 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 PMCHL2Q9BQD1 86 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 ERG28Q9UKR5 140 aa2.08□□□□□ -2.08
HDAC9-209ENST00000425071 RYR2Q92736 4967 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 RYR3Q15413 4870 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 IGKV2D-26A0A0A0MRZ7 120 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 TMEM238C9JI98 176 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 DLEU1O43261 78 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 IFITM1P13164 125 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 PFN2P35080 140 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 HINT1P49773 126 aaPredicted RBP2.07□□□□□ -2.08
HDAC9-209ENST00000425071 WFDC2Q14508 124 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 C2orf82Q6UX34 121 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 SCGB1D4Q6XE38 83 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 Q6ZSA8 131 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 VAMP8Q9BV40 100 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 C6orf48Q9UBA6 75 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 TP73-AS1Q9UF72 201 aa2.07□□□□□ -2.08
HDAC9-209ENST00000425071 DNAH5Q8TE73 4624 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 LOC107984156A0A0G2JMH3 177 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 TRBV10-2A0A0K0K1G8 114 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 ZNF815PA8K554 130 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 SNCGO76070 127 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 NDUFC2O95298 119 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 SLC25A34Q6PIV7 304 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 ARL17AQ8IVW1 177 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 LINC00526Q96FQ7 95 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 ZNF625Q96I27 306 aaPredicted RBP2.06□□□□□ -2.08
HDAC9-209ENST00000425071 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 LRP1BQ9NZR2 4599 aa2.06□□□□□ -2.08
HDAC9-209ENST00000425071 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 A0A096LNI7 61 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 M0R378 163 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 SMIM13P0DJ93 91 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 UBE2BP63146 152 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
HDAC9-209ENST00000425071 S100A7L2Q5SY68 101 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 MIR7-3HGQ8N6C7 128 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 TMEM126AQ9H061 195 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 SND1-IT1Q9HBX3 110 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 C22orf24Q9Y442 160 aa2.05□□□□□ -2.08
HDAC9-209ENST00000425071 TRAV13-2A0A0B4J235 113 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 COX8AP10176 69 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 DYNC1H1Q14204 4646 aaKnown RBP2.04□□□□□ -2.08
HDAC9-209ENST00000425071 VAMP3Q15836 100 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 TAL2Q16559 108 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 SCXQ7RTU7 201 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 MRPL55Q7Z7F7 128 aaKnown RBP2.04□□□□□ -2.08
HDAC9-209ENST00000425071 ATOH7Q8N100 152 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 SPANXDQ9BXN6 97 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 XAGE1AQ9HD64 81 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 SPANXB1Q9NS25 103 aaPredicted RBP2.04□□□□□ -2.08
HDAC9-209ENST00000425071 SPANXCQ9NY87 97 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 HIGD1BQ9P298 99 aa2.04□□□□□ -2.08
HDAC9-209ENST00000425071 A0A1W2PNN7 141 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 M0QXV9 152 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 SMIM6P0DI80 62 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 RPL28P46779 137 aaKnown RBP2.03□□□□□ -2.08
HDAC9-209ENST00000425071 RPL37AP61513 92 aaKnown RBP2.03□□□□□ -2.08
HDAC9-209ENST00000425071 KRTAP13-2Q52LG2 175 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 SPINK6Q6UWN8 80 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 FAM19A5Q7Z5A7 132 aaPredicted RBP2.03□□□□□ -2.08
HDAC9-209ENST00000425071 LINC00308Q8TCZ7 52 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 UQCR10Q9UDW1 63 aa2.03□□□□□ -2.08
HDAC9-209ENST00000425071 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
HDAC9-209ENST00000425071 TRBV7-6A0A0J9YX20 115 aa2.02□□□□□ -2.09
HDAC9-209ENST00000425071 TSTD3H0UI37 97 aa2.02□□□□□ -2.09
HDAC9-209ENST00000425071 SLC25A20O43772 301 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms