RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
TPM3P9-201ENST00000424846 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
TPM3P9-201ENST00000424846 F8P00451 2351 aa9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 FBN1P35555 2871 aaKnown RBP9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 BPY2O14599 106 aa9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 KRTAP10-11P60412 298 aa9.28□□□□□ -0.92
TPM3P9-201ENST00000424846 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
TPM3P9-201ENST00000424846 C5orf47Q569G3 176 aa9.27□□□□□ -0.93
TPM3P9-201ENST00000424846 F8WEM9 126 aa9.27□□□□□ -0.93
TPM3P9-201ENST00000424846 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
TPM3P9-201ENST00000424846 H3BQ85 93 aa9.25□□□□□ -0.93
TPM3P9-201ENST00000424846 FAM168BA1KXE4 195 aa9.24□□□□□ -0.93
TPM3P9-201ENST00000424846 BCE1O60756 84 aa9.24□□□□□ -0.93
TPM3P9-201ENST00000424846 Q8N377 158 aa9.24□□□□□ -0.93
TPM3P9-201ENST00000424846 C7orf33Q8WU49 177 aa9.24□□□□□ -0.93
TPM3P9-201ENST00000424846 RPL37AP8A6NKH3 93 aa9.24□□□□□ -0.93
TPM3P9-201ENST00000424846 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
TPM3P9-201ENST00000424846 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
TPM3P9-201ENST00000424846 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
TPM3P9-201ENST00000424846 NREPQ16612 68 aa9.22□□□□□ -0.93
TPM3P9-201ENST00000424846 WIPF1O43516 503 aa9.21□□□□□ -0.93
TPM3P9-201ENST00000424846 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
TPM3P9-201ENST00000424846 DNAH1Q9P2D7 4330 aa9.2□□□□□ -0.94
TPM3P9-201ENST00000424846 H3BNG1 76 aa9.2□□□□□ -0.94
TPM3P9-201ENST00000424846 KCNQ1DNQ9H478 68 aa9.2□□□□□ -0.94
TPM3P9-201ENST00000424846 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
TPM3P9-201ENST00000424846 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
TPM3P9-201ENST00000424846 Q9BRP9 147 aa9.19□□□□□ -0.94
TPM3P9-201ENST00000424846 LYSTQ99698 3801 aa9.19□□□□□ -0.94
TPM3P9-201ENST00000424846 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
TPM3P9-201ENST00000424846 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
TPM3P9-201ENST00000424846 DNAH10Q8IVF4 4471 aa9.18□□□□□ -0.94
TPM3P9-201ENST00000424846 DEFB131BA0A096LNP1 70 aa9.18□□□□□ -0.94
TPM3P9-201ENST00000424846 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
TPM3P9-201ENST00000424846 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
TPM3P9-201ENST00000424846 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
TPM3P9-201ENST00000424846 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
TPM3P9-201ENST00000424846 OCR1Q9BZK8 76 aa9.15□□□□□ -0.94
TPM3P9-201ENST00000424846 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.94
TPM3P9-201ENST00000424846 ERC2-IT1O76042 136 aa9.15□□□□□ -0.94
TPM3P9-201ENST00000424846 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.95
TPM3P9-201ENST00000424846 DNAH3Q8TD57 4116 aa9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 IGLV5-48A0A075B6I7 105 aa9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 COL6A5A8TX70 2615 aa9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 NBEAL1Q6ZS30 2694 aa9.14□□□□□ -0.95
TPM3P9-201ENST00000424846 SRRM2Q9UQ35 2752 aaKnown RBP9.13□□□□□ -0.95
TPM3P9-201ENST00000424846 Q6ZRX8 168 aa9.13□□□□□ -0.95
TPM3P9-201ENST00000424846 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
TPM3P9-201ENST00000424846 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
TPM3P9-201ENST00000424846 IGLV1-50A0A075B6I6 118 aa9.11□□□□□ -0.95
TPM3P9-201ENST00000424846 FAM229BQ4G0N7 80 aa9.11□□□□□ -0.95
TPM3P9-201ENST00000424846 TNP2Q05952 138 aa9.1□□□□□ -0.95
TPM3P9-201ENST00000424846 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
TPM3P9-201ENST00000424846 FAM30AQ9NZY2 134 aa9.1□□□□□ -0.95
TPM3P9-201ENST00000424846 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
TPM3P9-201ENST00000424846 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
TPM3P9-201ENST00000424846 PRB2P02812 416 aaPredicted RBP9.09□□□□□ -0.95
TPM3P9-201ENST00000424846 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
TPM3P9-201ENST00000424846 LINC00588Q9Y4M8 146 aa9.09□□□□□ -0.95
TPM3P9-201ENST00000424846 ETDCA0A1B0GVM5 59 aa9.08□□□□□ -0.96
TPM3P9-201ENST00000424846 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
TPM3P9-201ENST00000424846 SPRR1AP35321 89 aa9.08□□□□□ -0.96
TPM3P9-201ENST00000424846 PRYO14603 147 aa9.07□□□□□ -0.96
TPM3P9-201ENST00000424846 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
TPM3P9-201ENST00000424846 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
TPM3P9-201ENST00000424846 NDUFC1O43677 76 aa9.06□□□□□ -0.96
TPM3P9-201ENST00000424846 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
TPM3P9-201ENST00000424846 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
TPM3P9-201ENST00000424846 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
TPM3P9-201ENST00000424846 DNAH9Q9NYC9 4486 aa9.05□□□□□ -0.96
TPM3P9-201ENST00000424846 DSCR10P59022 87 aa9.05□□□□□ -0.96
TPM3P9-201ENST00000424846 F8WDY8 70 aa9.04□□□□□ -0.96
TPM3P9-201ENST00000424846 Q8NBF4 154 aa9.04□□□□□ -0.96
TPM3P9-201ENST00000424846 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
TPM3P9-201ENST00000424846 UBE2BP63146 152 aa9.04□□□□□ -0.96
TPM3P9-201ENST00000424846 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
TPM3P9-201ENST00000424846 K7EQZ3 153 aa9.04□□□□□ -0.96
TPM3P9-201ENST00000424846 MRPL55Q7Z7F7 128 aaKnown RBP9.03□□□□□ -0.96
TPM3P9-201ENST00000424846 DEFB116Q30KQ4 102 aa9.03□□□□□ -0.96
TPM3P9-201ENST00000424846 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.96
TPM3P9-201ENST00000424846 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.97
TPM3P9-201ENST00000424846 TENM2Q9NT68 2774 aa9□□□□□ -0.97
TPM3P9-201ENST00000424846 MPLKIPQ8TAP9 179 aa9□□□□□ -0.97
TPM3P9-201ENST00000424846 SPRR4Q96PI1 79 aa9□□□□□ -0.97
TPM3P9-201ENST00000424846 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
TPM3P9-201ENST00000424846 COL7A1Q02388 2944 aa8.99□□□□□ -0.97
TPM3P9-201ENST00000424846 PRLHP81277 87 aa8.98□□□□□ -0.97
TPM3P9-201ENST00000424846 STAB2Q8WWQ8 2551 aa8.98□□□□□ -0.97
TPM3P9-201ENST00000424846 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
TPM3P9-201ENST00000424846 ATP5EP56381 51 aaPredicted RBP8.97□□□□□ -0.97
TPM3P9-201ENST00000424846 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
TPM3P9-201ENST00000424846 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.98
TPM3P9-201ENST00000424846 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
TPM3P9-201ENST00000424846 IGFL1Q6UW32 110 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms