RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 A0A0J9YXY3 114 aa6.49□□□□□ -1.37
SQSTM1-203ENST00000422245 E9PLD3 99 aa6.49□□□□□ -1.37
SQSTM1-203ENST00000422245 SLC25A20O43772 301 aa6.49□□□□□ -1.37
SQSTM1-203ENST00000422245 SOSTDC1Q6X4U4 206 aa6.49□□□□□ -1.37
SQSTM1-203ENST00000422245 Q8N377 158 aa6.49□□□□□ -1.37
SQSTM1-203ENST00000422245 C5orf52A6NGY3 159 aa6.48□□□□□ -1.37
SQSTM1-203ENST00000422245 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
SQSTM1-203ENST00000422245 HINT1P49773 126 aaPredicted RBP6.47□□□□□ -1.37
SQSTM1-203ENST00000422245 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
SQSTM1-203ENST00000422245 NPC2P61916 151 aa6.47□□□□□ -1.37
SQSTM1-203ENST00000422245 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
SQSTM1-203ENST00000422245 COLCA2A8K830 154 aa6.46□□□□□ -1.38
SQSTM1-203ENST00000422245 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.38
SQSTM1-203ENST00000422245 SPANXCQ9NY87 97 aa6.46□□□□□ -1.38
SQSTM1-203ENST00000422245 SYS1-DBNDD2H3BUS1 97 aa6.45□□□□□ -1.38
SQSTM1-203ENST00000422245 TIMM17BO60830 172 aa6.44□□□□□ -1.38
SQSTM1-203ENST00000422245 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
SQSTM1-203ENST00000422245 ST20-AS1Q8NBB2 130 aa6.44□□□□□ -1.38
SQSTM1-203ENST00000422245 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
SQSTM1-203ENST00000422245 LITAFQ99732 161 aa6.44□□□□□ -1.38
SQSTM1-203ENST00000422245 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
SQSTM1-203ENST00000422245 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
SQSTM1-203ENST00000422245 SPRR1BP22528 89 aa6.42□□□□□ -1.38
SQSTM1-203ENST00000422245 XP32Q5T750 250 aa6.42□□□□□ -1.38
SQSTM1-203ENST00000422245 LINC01545Q5VT33 79 aa6.42□□□□□ -1.38
SQSTM1-203ENST00000422245 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
SQSTM1-203ENST00000422245 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 PET117Q6UWS5 81 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 SLC7A5P1Q8MH63 180 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 LIMD2Q9BT23 127 aa6.41□□□□□ -1.38
SQSTM1-203ENST00000422245 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.38
SQSTM1-203ENST00000422245 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
SQSTM1-203ENST00000422245 LINC00518Q8N0U6 118 aa6.39□□□□□ -1.39
SQSTM1-203ENST00000422245 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
SQSTM1-203ENST00000422245 LAMTOR3Q9UHA4 124 aa6.39□□□□□ -1.39
SQSTM1-203ENST00000422245 COX7BP24311 80 aa6.38□□□□□ -1.39
SQSTM1-203ENST00000422245 C6orf99Q4VX62 202 aa6.37□□□□□ -1.39
SQSTM1-203ENST00000422245 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
SQSTM1-203ENST00000422245 TTTY13Q9BZ97 58 aa6.36□□□□□ -1.39
SQSTM1-203ENST00000422245 C3orf79P0CE67 100 aa6.35□□□□□ -1.39
SQSTM1-203ENST00000422245 CD164Q04900 197 aa6.35□□□□□ -1.39
SQSTM1-203ENST00000422245 SCGB1D4Q6XE38 83 aa6.35□□□□□ -1.39
SQSTM1-203ENST00000422245 TRBV7-6A0A0J9YX20 115 aa6.34□□□□□ -1.39
SQSTM1-203ENST00000422245 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
SQSTM1-203ENST00000422245 C20orf202A1L168 122 aa6.34□□□□□ -1.39
SQSTM1-203ENST00000422245 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
SQSTM1-203ENST00000422245 TEX49A0A1B0GTD5 131 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 IFITM1P13164 125 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 KRTDAPP60985 99 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 TAL2Q16559 108 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 Q1RN00 199 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 COA6Q5JTJ3 125 aaKnown RBP6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
SQSTM1-203ENST00000422245 H7C2G1 150 aa6.31□□□□□ -1.4
SQSTM1-203ENST00000422245 Q6ZVH6 145 aa6.31□□□□□ -1.4
SQSTM1-203ENST00000422245 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
SQSTM1-203ENST00000422245 IGLV5-48A0A075B6I7 105 aa6.3□□□□□ -1.4
SQSTM1-203ENST00000422245 A6NDN8 102 aa6.3□□□□□ -1.4
SQSTM1-203ENST00000422245 AKR1D1P51857 326 aa6.3□□□□□ -1.4
SQSTM1-203ENST00000422245 Q5XG85 94 aa6.3□□□□□ -1.4
SQSTM1-203ENST00000422245 A4D1N5 150 aa6.29□□□□□ -1.4
SQSTM1-203ENST00000422245 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
SQSTM1-203ENST00000422245 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
SQSTM1-203ENST00000422245 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
SQSTM1-203ENST00000422245 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
SQSTM1-203ENST00000422245 NHP2Q9NX24 153 aaKnown RBP6.28□□□□□ -1.4
SQSTM1-203ENST00000422245 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
SQSTM1-203ENST00000422245 TRAV13-2A0A0B4J235 113 aa6.27□□□□□ -1.41
SQSTM1-203ENST00000422245 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
SQSTM1-203ENST00000422245 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
SQSTM1-203ENST00000422245 PCP2Q8IVA1 136 aa6.26□□□□□ -1.41
SQSTM1-203ENST00000422245 MUSTN1Q8IVN3 82 aa6.26□□□□□ -1.41
SQSTM1-203ENST00000422245 ATOH7Q8N100 152 aa6.26□□□□□ -1.41
SQSTM1-203ENST00000422245 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
SQSTM1-203ENST00000422245 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
SQSTM1-203ENST00000422245 SNRPEP62304 92 aaKnown RBP6.24□□□□□ -1.41
SQSTM1-203ENST00000422245 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
SQSTM1-203ENST00000422245 F8WEM9 126 aa6.23□□□□□ -1.41
SQSTM1-203ENST00000422245 TCL1BO95988 128 aa6.22□□□□□ -1.41
SQSTM1-203ENST00000422245 A0A0G2JQZ4 141 aa6.21□□□□□ -1.42
SQSTM1-203ENST00000422245 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
SQSTM1-203ENST00000422245 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
SQSTM1-203ENST00000422245 MT1HP80294 61 aa6.21□□□□□ -1.42
SQSTM1-203ENST00000422245 VAMP3Q15836 100 aa6.21□□□□□ -1.42
SQSTM1-203ENST00000422245 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
SQSTM1-203ENST00000422245 Q6JHZ5 121 aa6.18□□□□□ -1.42
SQSTM1-203ENST00000422245 LINC00575Q6W349 94 aa6.18□□□□□ -1.42
SQSTM1-203ENST00000422245 Q6ZQY7 126 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms