RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
DDX56-203ENST00000421223 COX7BP24311 80 aa7.2□□□□□ -1.26
DDX56-203ENST00000421223 M0R378 163 aa7.19□□□□□ -1.26
DDX56-203ENST00000421223 UBE2DNLQ8IWF7 75 aa7.19□□□□□ -1.26
DDX56-203ENST00000421223 DEFB105AQ8NG35 78 aa7.19□□□□□ -1.26
DDX56-203ENST00000421223 MUC7Q8TAX7 377 aa7.19□□□□□ -1.26
DDX56-203ENST00000421223 COL7A1Q02388 2944 aa7.19□□□□□ -1.26
DDX56-203ENST00000421223 FAM168BA1KXE4 195 aa7.18□□□□□ -1.26
DDX56-203ENST00000421223 JMJD7-PLA2G4BH0Y9G9 81 aa7.18□□□□□ -1.26
DDX56-203ENST00000421223 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
DDX56-203ENST00000421223 SERTAD4-AS1Q5TG53 156 aa7.18□□□□□ -1.26
DDX56-203ENST00000421223 HIST1H4AP62805 103 aaKnown RBP7.17□□□□□ -1.26
DDX56-203ENST00000421223 CCKP06307 115 aa7.17□□□□□ -1.26
DDX56-203ENST00000421223 PMAIP1Q13794 54 aa7.17□□□□□ -1.26
DDX56-203ENST00000421223 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
DDX56-203ENST00000421223 A0A087WVE0 104 aa7.16□□□□□ -1.26
DDX56-203ENST00000421223 PSCAO43653 123 aa7.16□□□□□ -1.26
DDX56-203ENST00000421223 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.15□□□□□ -1.27
DDX56-203ENST00000421223 IGKV2-24A0A0C4DH68 120 aa7.15□□□□□ -1.27
DDX56-203ENST00000421223 M0R2N4 97 aa7.15□□□□□ -1.27
DDX56-203ENST00000421223 Q6JHZ5 121 aa7.15□□□□□ -1.27
DDX56-203ENST00000421223 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
DDX56-203ENST00000421223 C7orf33Q8WU49 177 aa7.14□□□□□ -1.27
DDX56-203ENST00000421223 CD164Q04900 197 aa7.13□□□□□ -1.27
DDX56-203ENST00000421223 RMI2Q96E14 147 aa7.13□□□□□ -1.27
DDX56-203ENST00000421223 ELOF1P60002 83 aaKnown RBP7.13□□□□□ -1.27
DDX56-203ENST00000421223 TMEM258P61165 79 aa7.12□□□□□ -1.27
DDX56-203ENST00000421223 HAMPP81172 84 aa7.12□□□□□ -1.27
DDX56-203ENST00000421223 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
DDX56-203ENST00000421223 KRTAP1-5Q9BYS1 174 aa7.11□□□□□ -1.27
DDX56-203ENST00000421223 COX7CP15954 63 aa7.11□□□□□ -1.27
DDX56-203ENST00000421223 UBL5Q9BZL1 73 aa7.11□□□□□ -1.27
DDX56-203ENST00000421223 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
DDX56-203ENST00000421223 LYSTQ99698 3801 aa7.1□□□□□ -1.27
DDX56-203ENST00000421223 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.27
DDX56-203ENST00000421223 ATOX1O00244 68 aa7.09□□□□□ -1.27
DDX56-203ENST00000421223 CRYGAP11844 174 aa7.09□□□□□ -1.27
DDX56-203ENST00000421223 Q6ZQT0 140 aa7.09□□□□□ -1.27
DDX56-203ENST00000421223 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
DDX56-203ENST00000421223 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.28
DDX56-203ENST00000421223 SCXQ7RTU7 201 aa7.09□□□□□ -1.28
DDX56-203ENST00000421223 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
DDX56-203ENST00000421223 UBE2BP63146 152 aa7.07□□□□□ -1.28
DDX56-203ENST00000421223 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
DDX56-203ENST00000421223 LOC110117498A0A087WWA1 95 aa7.05□□□□□ -1.28
DDX56-203ENST00000421223 ATP5EP2Q5VTU8 51 aa7.05□□□□□ -1.28
DDX56-203ENST00000421223 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
DDX56-203ENST00000421223 GHRHP01286 108 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 C3orf84H3BNL1 204 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 APLNQ9ULZ1 77 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 DNAH10Q8IVF4 4471 aa7.04□□□□□ -1.28
DDX56-203ENST00000421223 A0A096LNI7 61 aa7.03□□□□□ -1.28
DDX56-203ENST00000421223 TRBV7-6A0A0J9YX20 115 aa7.03□□□□□ -1.28
DDX56-203ENST00000421223 Q6ZVQ6 151 aa7.03□□□□□ -1.28
DDX56-203ENST00000421223 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
DDX56-203ENST00000421223 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
DDX56-203ENST00000421223 B9D2Q9BPU9 175 aa7.03□□□□□ -1.28
DDX56-203ENST00000421223 FUSP35637 526 aaKnown RBP eCLIP7.02□□□□□ -1.29
DDX56-203ENST00000421223 SERP2Q8N6R1 65 aa7.02□□□□□ -1.29
DDX56-203ENST00000421223 Q9BRP9 147 aa7.02□□□□□ -1.29
DDX56-203ENST00000421223 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 Q8N377 158 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 H3BQ85 93 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 PRLHP81277 87 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 Q6ZRX8 168 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
DDX56-203ENST00000421223 HIGD2AQ9BW72 106 aa7.01□□□□□ -1.29
DDX56-203ENST00000421223 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
DDX56-203ENST00000421223 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
DDX56-203ENST00000421223 PDE6GP18545 87 aa7□□□□□ -1.29
DDX56-203ENST00000421223 DNAH9Q9NYC9 4486 aa6.99□□□□□ -1.29
DDX56-203ENST00000421223 A0A0G2JQZ4 141 aa6.99□□□□□ -1.29
DDX56-203ENST00000421223 Q8N9L7 120 aa6.99□□□□□ -1.29
DDX56-203ENST00000421223 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
DDX56-203ENST00000421223 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
DDX56-203ENST00000421223 PRYO14603 147 aa6.98□□□□□ -1.29
DDX56-203ENST00000421223 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
DDX56-203ENST00000421223 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
DDX56-203ENST00000421223 NREPQ16612 68 aa6.96□□□□□ -1.29
DDX56-203ENST00000421223 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.29
DDX56-203ENST00000421223 TGP01266 2768 aa6.96□□□□□ -1.3
DDX56-203ENST00000421223 NBDYA0A0U1RRE5 68 aa6.95□□□□□ -1.3
DDX56-203ENST00000421223 C16orf90A8MZG2 172 aa6.95□□□□□ -1.3
DDX56-203ENST00000421223 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
DDX56-203ENST00000421223 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
DDX56-203ENST00000421223 KRTAP4-16G5E9R7 235 aaPredicted RBP6.95□□□□□ -1.3
DDX56-203ENST00000421223 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
DDX56-203ENST00000421223 DNAH7Q8WXX0 4024 aa6.94□□□□□ -1.3
DDX56-203ENST00000421223 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
DDX56-203ENST00000421223 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
DDX56-203ENST00000421223 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
DDX56-203ENST00000421223 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
DDX56-203ENST00000421223 SPRR1AP35321 89 aa6.93□□□□□ -1.3
DDX56-203ENST00000421223 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
DDX56-203ENST00000421223 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
DDX56-203ENST00000421223 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms