RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 PDE6GP18545 87 aa8.59□□□□□ -1.03
LINC00642-201ENST00000419459 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
LINC00642-201ENST00000419459 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
LINC00642-201ENST00000419459 LINC00269Q8N2A0 174 aa8.59□□□□□ -1.03
LINC00642-201ENST00000419459 Q6ZQT0 140 aa8.58□□□□□ -1.04
LINC00642-201ENST00000419459 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
LINC00642-201ENST00000419459 H7BZZ5 65 aa8.58□□□□□ -1.04
LINC00642-201ENST00000419459 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
LINC00642-201ENST00000419459 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
LINC00642-201ENST00000419459 KRTAP1-5Q9BYS1 174 aa8.58□□□□□ -1.04
LINC00642-201ENST00000419459 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
LINC00642-201ENST00000419459 LY6G6CO95867 125 aa8.57□□□□□ -1.04
LINC00642-201ENST00000419459 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
LINC00642-201ENST00000419459 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
LINC00642-201ENST00000419459 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
LINC00642-201ENST00000419459 CXCL6P80162 114 aa8.56□□□□□ -1.04
LINC00642-201ENST00000419459 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
LINC00642-201ENST00000419459 LINC00575Q6W349 94 aa8.56□□□□□ -1.04
LINC00642-201ENST00000419459 NDUFC1O43677 76 aa8.56□□□□□ -1.04
LINC00642-201ENST00000419459 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
LINC00642-201ENST00000419459 M0R2N4 97 aa8.54□□□□□ -1.04
LINC00642-201ENST00000419459 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
LINC00642-201ENST00000419459 REG3AQ06141 175 aa8.54□□□□□ -1.04
LINC00642-201ENST00000419459 LINC01547P58512 204 aaPredicted RBP8.54□□□□□ -1.04
LINC00642-201ENST00000419459 C6orf99Q4VX62 202 aa8.54□□□□□ -1.04
LINC00642-201ENST00000419459 LINC00476Q8WZB0 136 aa8.54□□□□□ -1.04
LINC00642-201ENST00000419459 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
LINC00642-201ENST00000419459 FRAS1Q86XX4 4008 aa8.52□□□□□ -1.05
LINC00642-201ENST00000419459 CD164L2Q6UWJ8 174 aa8.52□□□□□ -1.05
LINC00642-201ENST00000419459 SMIM26A0A096LP01 95 aa8.51□□□□□ -1.05
LINC00642-201ENST00000419459 Q6ZVQ6 151 aa8.51□□□□□ -1.05
LINC00642-201ENST00000419459 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
LINC00642-201ENST00000419459 PRO0628Q9UI54 55 aa8.51□□□□□ -1.05
LINC00642-201ENST00000419459 PRR3P79522 188 aaKnown RBP8.51□□□□□ -1.05
LINC00642-201ENST00000419459 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
LINC00642-201ENST00000419459 NBDYA0A0U1RRE5 68 aa8.49□□□□□ -1.05
LINC00642-201ENST00000419459 HAMPP81172 84 aa8.48□□□□□ -1.05
LINC00642-201ENST00000419459 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
LINC00642-201ENST00000419459 CHCHD10Q8WYQ3 142 aaPredicted RBP8.47□□□□□ -1.05
LINC00642-201ENST00000419459 DNAH6Q9C0G6 4158 aa8.47□□□□□ -1.05
LINC00642-201ENST00000419459 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
LINC00642-201ENST00000419459 IGLV6-57P01721 117 aa8.47□□□□□ -1.05
LINC00642-201ENST00000419459 TRBV7-4A0A0J9YYF1 115 aa8.45□□□□□ -1.06
LINC00642-201ENST00000419459 C1orf43Q9BWL3 253 aa8.45□□□□□ -1.06
LINC00642-201ENST00000419459 F8WEM9 126 aa8.44□□□□□ -1.06
LINC00642-201ENST00000419459 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.44□□□□□ -1.06
LINC00642-201ENST00000419459 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
LINC00642-201ENST00000419459 Q6ZQY7 126 aa8.43□□□□□ -1.06
LINC00642-201ENST00000419459 Q6ZR54 194 aa8.43□□□□□ -1.06
LINC00642-201ENST00000419459 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
LINC00642-201ENST00000419459 Q8NDZ9 215 aa8.42□□□□□ -1.06
LINC00642-201ENST00000419459 RMI2Q96E14 147 aa8.42□□□□□ -1.06
LINC00642-201ENST00000419459 LINC00336Q6ZUF6 198 aa8.42□□□□□ -1.06
LINC00642-201ENST00000419459 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
LINC00642-201ENST00000419459 FP248Q71RG6 208 aaPredicted RBP8.41□□□□□ -1.06
LINC00642-201ENST00000419459 DIRC1Q969H9 104 aa8.41□□□□□ -1.06
LINC00642-201ENST00000419459 RYR2Q92736 4967 aa8.41□□□□□ -1.06
LINC00642-201ENST00000419459 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
LINC00642-201ENST00000419459 GVQW2A0A096LPI5 108 aaPredicted RBP8.41□□□□□ -1.06
LINC00642-201ENST00000419459 C9orf116Q5BN46 136 aaPredicted RBP8.41□□□□□ -1.06
LINC00642-201ENST00000419459 RYR3Q15413 4870 aa8.4□□□□□ -1.06
LINC00642-201ENST00000419459 LCE6AA0A183 80 aa8.4□□□□□ -1.06
LINC00642-201ENST00000419459 DNAH17Q9UFH2 4485 aa8.39□□□□□ -1.07
LINC00642-201ENST00000419459 PSCAO43653 123 aa8.39□□□□□ -1.07
LINC00642-201ENST00000419459 NREPQ16612 68 aa8.39□□□□□ -1.07
LINC00642-201ENST00000419459 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
LINC00642-201ENST00000419459 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
LINC00642-201ENST00000419459 COX7BP24311 80 aa8.37□□□□□ -1.07
LINC00642-201ENST00000419459 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
LINC00642-201ENST00000419459 BPY2O14599 106 aa8.37□□□□□ -1.07
LINC00642-201ENST00000419459 ELOF1P60002 83 aaKnown RBP8.37□□□□□ -1.07
LINC00642-201ENST00000419459 HIGD2BQ4VC39 106 aa8.37□□□□□ -1.07
LINC00642-201ENST00000419459 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
LINC00642-201ENST00000419459 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
LINC00642-201ENST00000419459 C15orf56Q8N910 161 aa8.36□□□□□ -1.07
LINC00642-201ENST00000419459 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
LINC00642-201ENST00000419459 ZNF73O43830 326 aaPredicted RBP8.35□□□□□ -1.07
LINC00642-201ENST00000419459 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
LINC00642-201ENST00000419459 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
LINC00642-201ENST00000419459 PKD1P98161 4303 aa8.33□□□□□ -1.08
LINC00642-201ENST00000419459 RTL8CO15255 209 aa8.32□□□□□ -1.08
LINC00642-201ENST00000419459 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00642-201ENST00000419459 PRYO14603 147 aa8.32□□□□□ -1.08
LINC00642-201ENST00000419459 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
LINC00642-201ENST00000419459 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
LINC00642-201ENST00000419459 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
LINC00642-201ENST00000419459 LRCOL1A6NCL2 159 aa8.31□□□□□ -1.08
LINC00642-201ENST00000419459 DNAH11Q96DT5 4516 aa8.31□□□□□ -1.08
LINC00642-201ENST00000419459 A0A1B0GW54 56 aa8.3□□□□□ -1.08
LINC00642-201ENST00000419459 TNP2Q05952 138 aa8.3□□□□□ -1.08
LINC00642-201ENST00000419459 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
LINC00642-201ENST00000419459 IGKV4-1P06312 121 aa8.3□□□□□ -1.08
LINC00642-201ENST00000419459 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
LINC00642-201ENST00000419459 C6orf48Q9UBA6 75 aa8.29□□□□□ -1.08
LINC00642-201ENST00000419459 M0R378 163 aa8.28□□□□□ -1.08
LINC00642-201ENST00000419459 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
LINC00642-201ENST00000419459 A0A087WTM6 91 aa8.27□□□□□ -1.09
LINC00642-201ENST00000419459 VPREB1P12018 145 aa8.27□□□□□ -1.09
LINC00642-201ENST00000419459 Q6ZRU5 148 aa8.26□□□□□ -1.09
LINC00642-201ENST00000419459 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms