RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
SEMA3B-203ENST00000419007 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
SEMA3B-203ENST00000419007 TM2D3Q9BRN9 247 aa10.03□□□□□ -0.8
SEMA3B-203ENST00000419007 KRTAP24-1Q3LI83 254 aa10.02□□□□□ -0.8
SEMA3B-203ENST00000419007 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.8
SEMA3B-203ENST00000419007 Q6ZRP5 223 aa10.02□□□□□ -0.81
SEMA3B-203ENST00000419007 H7BZZ5 65 aa10.02□□□□□ -0.81
SEMA3B-203ENST00000419007 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
SEMA3B-203ENST00000419007 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
SEMA3B-203ENST00000419007 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
SEMA3B-203ENST00000419007 MGAM2Q2M2H8 2515 aa10.01□□□□□ -0.81
SEMA3B-203ENST00000419007 ESRGQ1W209 222 aa10.01□□□□□ -0.81
SEMA3B-203ENST00000419007 NKAPP1Q8N9T2 125 aa10□□□□□ -0.81
SEMA3B-203ENST00000419007 F8WEM9 126 aa9.99□□□□□ -0.81
SEMA3B-203ENST00000419007 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
SEMA3B-203ENST00000419007 TRBV7-6A0A0J9YX20 115 aa9.99□□□□□ -0.81
SEMA3B-203ENST00000419007 NREPQ16612 68 aa9.98□□□□□ -0.81
SEMA3B-203ENST00000419007 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
SEMA3B-203ENST00000419007 BCE1O60756 84 aa9.97□□□□□ -0.81
SEMA3B-203ENST00000419007 BPY2O14599 106 aa9.96□□□□□ -0.81
SEMA3B-203ENST00000419007 KLKP1Q107X0 134 aa9.96□□□□□ -0.81
SEMA3B-203ENST00000419007 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
SEMA3B-203ENST00000419007 Q5XG85 94 aa9.95□□□□□ -0.82
SEMA3B-203ENST00000419007 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
SEMA3B-203ENST00000419007 MRAPQ8TCY5 172 aa9.94□□□□□ -0.82
SEMA3B-203ENST00000419007 V9GYY9 64 aa9.94□□□□□ -0.82
SEMA3B-203ENST00000419007 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
SEMA3B-203ENST00000419007 DEFB131BA0A096LNP1 70 aa9.93□□□□□ -0.82
SEMA3B-203ENST00000419007 NBEAL1Q6ZS30 2694 aa9.92□□□□□ -0.82
SEMA3B-203ENST00000419007 SERP1Q9Y6X1 66 aa9.92□□□□□ -0.82
SEMA3B-203ENST00000419007 H3BNG1 76 aa9.91□□□□□ -0.82
SEMA3B-203ENST00000419007 KRTAP10-11P60412 298 aa9.91□□□□□ -0.82
SEMA3B-203ENST00000419007 Q8N377 158 aa9.9□□□□□ -0.82
SEMA3B-203ENST00000419007 TMEM254Q8TBM7 123 aa9.9□□□□□ -0.83
SEMA3B-203ENST00000419007 FAM168BA1KXE4 195 aa9.89□□□□□ -0.83
SEMA3B-203ENST00000419007 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
SEMA3B-203ENST00000419007 LINC01556Q5JQF7 62 aa9.89□□□□□ -0.83
SEMA3B-203ENST00000419007 KCNQ1DNQ9H478 68 aa9.88□□□□□ -0.83
SEMA3B-203ENST00000419007 C11orf45Q8TAV5 145 aa9.88□□□□□ -0.83
SEMA3B-203ENST00000419007 ETDCA0A1B0GVM5 59 aa9.87□□□□□ -0.83
SEMA3B-203ENST00000419007 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
SEMA3B-203ENST00000419007 ST20-AS1Q8NBB2 130 aa9.86□□□□□ -0.83
SEMA3B-203ENST00000419007 NDUFC1O43677 76 aa9.84□□□□□ -0.83
SEMA3B-203ENST00000419007 CASC10Q5T4H9 136 aa9.84□□□□□ -0.83
SEMA3B-203ENST00000419007 Q6ZRX8 168 aa9.83□□□□□ -0.84
SEMA3B-203ENST00000419007 Q9BRP9 147 aa9.83□□□□□ -0.84
SEMA3B-203ENST00000419007 C1orf137Q5JT78 98 aa9.82□□□□□ -0.84
SEMA3B-203ENST00000419007 MDFIQ99750 246 aa9.82□□□□□ -0.84
SEMA3B-203ENST00000419007 DHRS4-AS1Q9P1J3 65 aa9.82□□□□□ -0.84
SEMA3B-203ENST00000419007 UBE2BP63146 152 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 FAM30AQ9NZY2 134 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 ANK2Q01484 3957 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 A0A1W2PNM2 257 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 HIGD2AQ9BW72 106 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
SEMA3B-203ENST00000419007 OCR1Q9BZK8 76 aa9.8□□□□□ -0.84
SEMA3B-203ENST00000419007 SMIM29Q86T20 159 aa9.8□□□□□ -0.84
SEMA3B-203ENST00000419007 SMIM26A0A096LP01 95 aa9.79□□□□□ -0.84
SEMA3B-203ENST00000419007 PRYO14603 147 aa9.79□□□□□ -0.84
SEMA3B-203ENST00000419007 PRB2P02812 416 aaPredicted RBP9.79□□□□□ -0.84
SEMA3B-203ENST00000419007 IGLV1-50A0A075B6I6 118 aa9.78□□□□□ -0.84
SEMA3B-203ENST00000419007 EPM2AB3EWF7 344 aa9.78□□□□□ -0.84
SEMA3B-203ENST00000419007 ERC2-IT1O76042 136 aa9.78□□□□□ -0.84
SEMA3B-203ENST00000419007 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
SEMA3B-203ENST00000419007 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
SEMA3B-203ENST00000419007 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
SEMA3B-203ENST00000419007 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
SEMA3B-203ENST00000419007 A0A0G2JQZ4 141 aa9.76□□□□□ -0.85
SEMA3B-203ENST00000419007 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
SEMA3B-203ENST00000419007 LINC00588Q9Y4M8 146 aa9.76□□□□□ -0.85
SEMA3B-203ENST00000419007 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
SEMA3B-203ENST00000419007 Q8NBF4 154 aa9.74□□□□□ -0.85
SEMA3B-203ENST00000419007 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
SEMA3B-203ENST00000419007 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
SEMA3B-203ENST00000419007 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
SEMA3B-203ENST00000419007 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
SEMA3B-203ENST00000419007 ATP5EP56381 51 aaPredicted RBP9.74□□□□□ -0.85
SEMA3B-203ENST00000419007 PRO0628Q9UI54 55 aa9.72□□□□□ -0.85
SEMA3B-203ENST00000419007 DEFB116Q30KQ4 102 aa9.72□□□□□ -0.85
SEMA3B-203ENST00000419007 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.85
SEMA3B-203ENST00000419007 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
SEMA3B-203ENST00000419007 K7EQZ3 153 aa9.71□□□□□ -0.86
SEMA3B-203ENST00000419007 SPRR1AP35321 89 aa9.71□□□□□ -0.86
SEMA3B-203ENST00000419007 TNP2Q05952 138 aa9.71□□□□□ -0.86
SEMA3B-203ENST00000419007 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.86
SEMA3B-203ENST00000419007 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
SEMA3B-203ENST00000419007 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
SEMA3B-203ENST00000419007 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
SEMA3B-203ENST00000419007 REG3GQ6UW15 175 aa9.69□□□□□ -0.86
SEMA3B-203ENST00000419007 DSCR10P59022 87 aa9.68□□□□□ -0.86
SEMA3B-203ENST00000419007 PRLHP81277 87 aa9.68□□□□□ -0.86
SEMA3B-203ENST00000419007 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
SEMA3B-203ENST00000419007 LINC00476Q8WZB0 136 aa9.67□□□□□ -0.86
SEMA3B-203ENST00000419007 SRRM2Q9UQ35 2752 aaKnown RBP9.67□□□□□ -0.86
SEMA3B-203ENST00000419007 A0A1B0GW54 56 aa9.65□□□□□ -0.86
SEMA3B-203ENST00000419007 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
SEMA3B-203ENST00000419007 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
SEMA3B-203ENST00000419007 PRR4Q16378 134 aa9.64□□□□□ -0.87
SEMA3B-203ENST00000419007 STAB2Q8WWQ8 2551 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms