RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CNFNQ9BYD5 112 aa1.41□□□□□ -2.18
CTDSPL-203ENST00000416688 CLTCL1P53675 1640 aa1.4□□□□□ -2.18
CTDSPL-203ENST00000416688 A0A1B0GVY2 172 aa1.4□□□□□ -2.19
CTDSPL-203ENST00000416688 I3L2K1 104 aa1.4□□□□□ -2.19
CTDSPL-203ENST00000416688 KRTAP10-3P60369 221 aa1.4□□□□□ -2.19
CTDSPL-203ENST00000416688 PRO3102Q9H379 93 aa1.4□□□□□ -2.19
CTDSPL-203ENST00000416688 CACNA1EQ15878 2313 aa1.4□□□□□ -2.19
CTDSPL-203ENST00000416688 NAV3Q8IVL0 2385 aa1.39□□□□□ -2.19
CTDSPL-203ENST00000416688 NDUFA1O15239 70 aa1.38□□□□□ -2.19
CTDSPL-203ENST00000416688 MINOS1Q5TGZ0 78 aa1.38□□□□□ -2.19
CTDSPL-203ENST00000416688 CNOT1A5YKK6 2376 aaKnown RBP1.37□□□□□ -2.19
CTDSPL-203ENST00000416688 FAM208BQ5VWN6 2430 aa1.37□□□□□ -2.19
CTDSPL-203ENST00000416688 KRTAP10-12P60413 245 aa1.37□□□□□ -2.19
CTDSPL-203ENST00000416688 C6orf48Q9UBA6 75 aa1.37□□□□□ -2.19
CTDSPL-203ENST00000416688 ZDBF2Q9HCK1 2354 aa1.37□□□□□ -2.19
CTDSPL-203ENST00000416688 JMJD1CQ15652 2540 aa1.36□□□□□ -2.19
CTDSPL-203ENST00000416688 COX6A2Q02221 97 aa1.36□□□□□ -2.19
CTDSPL-203ENST00000416688 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
CTDSPL-203ENST00000416688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.35□□□□□ -2.19
CTDSPL-203ENST00000416688 KRTAP13-3Q3SY46 172 aa1.35□□□□□ -2.19
CTDSPL-203ENST00000416688 LCE3CQ5T5A8 94 aa1.35□□□□□ -2.19
CTDSPL-203ENST00000416688 PIEZO2Q9H5I5 2752 aa1.35□□□□□ -2.19
CTDSPL-203ENST00000416688 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL-203ENST00000416688 KRTAP12-1P59990 96 aa1.34□□□□□ -2.19
CTDSPL-203ENST00000416688 TFF3Q07654 80 aa1.34□□□□□ -2.19
CTDSPL-203ENST00000416688 SPINK9Q5DT21 86 aa1.34□□□□□ -2.19
CTDSPL-203ENST00000416688 LOC730098B7Z3J9 87 aa1.33□□□□□ -2.2
CTDSPL-203ENST00000416688 CNTRLQ7Z7A1 2325 aa1.33□□□□□ -2.2
CTDSPL-203ENST00000416688 H0YAA0 97 aa1.32□□□□□ -2.2
CTDSPL-203ENST00000416688 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL-203ENST00000416688 OTOGLQ3ZCN5 2332 aa1.31□□□□□ -2.2
CTDSPL-203ENST00000416688 Q5VSD8 79 aa1.31□□□□□ -2.2
CTDSPL-203ENST00000416688 FBN1P35555 2871 aaKnown RBP1.31□□□□□ -2.2
CTDSPL-203ENST00000416688 UNC79Q9P2D8 2635 aa1.31□□□□□ -2.2
CTDSPL-203ENST00000416688 J3QKU1 62 aa1.3□□□□□ -2.2
CTDSPL-203ENST00000416688 IAPPP10997 89 aa1.3□□□□□ -2.2
CTDSPL-203ENST00000416688 KRTAP10-5P60370 271 aa1.3□□□□□ -2.2
CTDSPL-203ENST00000416688 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
CTDSPL-203ENST00000416688 C10orf95Q9H7T3 257 aa1.3□□□□□ -2.2
CTDSPL-203ENST00000416688 KRTAP10-10P60014 251 aa1.29□□□□□ -2.2
CTDSPL-203ENST00000416688 KRTAP13-1Q8IUC0 172 aa1.29□□□□□ -2.2
CTDSPL-203ENST00000416688 APLNQ9ULZ1 77 aa1.29□□□□□ -2.2
CTDSPL-203ENST00000416688 SORL1Q92673 2214 aa1.29□□□□□ -2.2
CTDSPL-203ENST00000416688 SPRR1AP35321 89 aa1.28□□□□□ -2.2
CTDSPL-203ENST00000416688 Q6ZSA8 131 aa1.28□□□□□ -2.2
CTDSPL-203ENST00000416688 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
CTDSPL-203ENST00000416688 DOPEY2Q9Y3R5 2298 aa1.28□□□□□ -2.2
CTDSPL-203ENST00000416688 NOTCH3Q9UM47 2321 aa1.28□□□□□ -2.2
CTDSPL-203ENST00000416688 ASH1LQ9NR48 2969 aaKnown RBP1.28□□□□□ -2.2
CTDSPL-203ENST00000416688 ALMS1Q8TCU4 4167 aa1.27□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP9-6A8MVA2 160 aa1.27□□□□□ -2.21
CTDSPL-203ENST00000416688 H3BUA1 57 aa1.27□□□□□ -2.21
CTDSPL-203ENST00000416688 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
CTDSPL-203ENST00000416688 WFDC13Q8IUB5 93 aa1.27□□□□□ -2.21
CTDSPL-203ENST00000416688 REV3LO60673 3130 aa1.27□□□□□ -2.21
CTDSPL-203ENST00000416688 TRIOBPQ9H2D6 2365 aa1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 WNK2Q9Y3S1 2297 aa1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 DEFB130BP0DP73 79 aa1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 DEFB130AP0DP74 79 aa1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 RPS27P42677 84 aaKnown RBP1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 RPS27LQ71UM5 84 aaKnown RBP1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 WFDC10BQ8IUB3 73 aa1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
CTDSPL-203ENST00000416688 IGLV5-48A0A075B6I7 105 aa1.25□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP5-4Q6L8H1 288 aa1.25□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
CTDSPL-203ENST00000416688 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL-203ENST00000416688 SPRR1BP22528 89 aa1.24□□□□□ -2.21
CTDSPL-203ENST00000416688 DEFB131AP59861 70 aa1.24□□□□□ -2.21
CTDSPL-203ENST00000416688 LELP1Q5T871 98 aa1.24□□□□□ -2.21
CTDSPL-203ENST00000416688 ARHGAP5-AS1Q96IT6 56 aa1.24□□□□□ -2.21
CTDSPL-203ENST00000416688 PTPRQQ9UMZ3 2332 aa1.24□□□□□ -2.21
CTDSPL-203ENST00000416688 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
CTDSPL-203ENST00000416688 WT1-ASQ06250 92 aa1.23□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP6-3Q3LI67 103 aa1.23□□□□□ -2.21
CTDSPL-203ENST00000416688 LCE3EQ5T5B0 92 aa1.23□□□□□ -2.21
CTDSPL-203ENST00000416688 PDE4DIPQ5VU43 2346 aa1.22□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP5-9P26371 169 aa1.22□□□□□ -2.21
CTDSPL-203ENST00000416688 KRTAP21-3Q3LHN1 58 aa1.22□□□□□ -2.21
CTDSPL-203ENST00000416688 KAAG1Q9UBP8 84 aa1.22□□□□□ -2.21
CTDSPL-203ENST00000416688 TPRP12270 2363 aaKnown RBP1.22□□□□□ -2.21
CTDSPL-203ENST00000416688 PLCE1Q9P212 2302 aa1.22□□□□□ -2.21
CTDSPL-203ENST00000416688 ZNF462Q96JM2 2506 aa1.21□□□□□ -2.22
CTDSPL-203ENST00000416688 A0A0D9SG42 100 aa1.2□□□□□ -2.22
CTDSPL-203ENST00000416688 RPL39P62891 51 aaKnown RBP1.19□□□□□ -2.22
CTDSPL-203ENST00000416688 DEFB109BQ30KR1 87 aa1.19□□□□□ -2.22
CTDSPL-203ENST00000416688 KNL1Q8NG31 2342 aa1.19□□□□□ -2.22
CTDSPL-203ENST00000416688 PKDREJQ9NTG1 2253 aa1.19□□□□□ -2.22
CTDSPL-203ENST00000416688 CACNA1AO00555 2505 aa1.19□□□□□ -2.22
CTDSPL-203ENST00000416688 C2CD3Q4AC94 2353 aa1.19□□□□□ -2.22
CTDSPL-203ENST00000416688 ROS1P08922 2347 aa1.18□□□□□ -2.22
CTDSPL-203ENST00000416688 TRANK1O15050 2925 aa1.18□□□□□ -2.22
CTDSPL-203ENST00000416688 SPTBN2O15020 2390 aa1.18□□□□□ -2.22
CTDSPL-203ENST00000416688 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
CTDSPL-203ENST00000416688 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
CTDSPL-203ENST00000416688 MMP24-AS1A0A0U1RRL7 71 aa1.16□□□□□ -2.22
CTDSPL-203ENST00000416688 KLK9Q2XQG4 91 aa1.16□□□□□ -2.22
CTDSPL-203ENST00000416688 RPL39LQ96EH5 51 aaKnown RBP1.16□□□□□ -2.22
CTDSPL-203ENST00000416688 NOP10Q9NPE3 64 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms