RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 SSBP3-AS1Q7Z2R9 100 aa13.53□□□□□ -0.24
AC005540.1-201ENST00000413911 S100A1P23297 94 aa13.52□□□□□ -0.25
AC005540.1-201ENST00000413911 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
AC005540.1-201ENST00000413911 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
AC005540.1-201ENST00000413911 J3QQQ9 107 aa13.5□□□□□ -0.25
AC005540.1-201ENST00000413911 DDTP30046 118 aa13.5□□□□□ -0.25
AC005540.1-201ENST00000413911 LINC01545Q5VT33 79 aa13.5□□□□□ -0.25
AC005540.1-201ENST00000413911 HERVK_113P61574 105 aa13.49□□□□□ -0.25
AC005540.1-201ENST00000413911 XP32Q5T750 250 aa13.49□□□□□ -0.25
AC005540.1-201ENST00000413911 PET117Q6UWS5 81 aa13.48□□□□□ -0.25
AC005540.1-201ENST00000413911 Q6ZRX8 168 aa13.48□□□□□ -0.25
AC005540.1-201ENST00000413911 FSIP2Q5CZC0 6907 aa13.48□□□□□ -0.25
AC005540.1-201ENST00000413911 TRBV10-2A0A0K0K1G8 114 aa13.47□□□□□ -0.25
AC005540.1-201ENST00000413911 SLC25A20O43772 301 aa13.47□□□□□ -0.25
AC005540.1-201ENST00000413911 LCE2CQ5TA81 110 aa13.47□□□□□ -0.25
AC005540.1-201ENST00000413911 E9PLD3 99 aa13.46□□□□□ -0.25
AC005540.1-201ENST00000413911 NMUP48645 174 aa13.46□□□□□ -0.25
AC005540.1-201ENST00000413911 C3orf79P0CE67 100 aa13.45□□□□□ -0.26
AC005540.1-201ENST00000413911 S100A12P80511 92 aa13.45□□□□□ -0.26
AC005540.1-201ENST00000413911 IGLV6-57P01721 117 aa13.43□□□□□ -0.26
AC005540.1-201ENST00000413911 SPANXB1Q9NS25 103 aaPredicted RBP13.43□□□□□ -0.26
AC005540.1-201ENST00000413911 LGALS3P17931 250 aaKnown RBP13.42□□□□□ -0.26
AC005540.1-201ENST00000413911 EIF4EBP3O60516 100 aaPredicted RBP13.41□□□□□ -0.26
AC005540.1-201ENST00000413911 KRTAP19-2Q3LHN2 52 aa13.4□□□□□ -0.26
AC005540.1-201ENST00000413911 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
AC005540.1-201ENST00000413911 ST20-AS1Q8NBB2 130 aa13.4□□□□□ -0.26
AC005540.1-201ENST00000413911 C9orf153Q5TBE3 101 aa13.39□□□□□ -0.27
AC005540.1-201ENST00000413911 MIEN1Q9BRT3 115 aa13.39□□□□□ -0.27
AC005540.1-201ENST00000413911 NPC2P61916 151 aa13.38□□□□□ -0.27
AC005540.1-201ENST00000413911 ADAMTSL4-AS1Q5T5F5 129 aa13.38□□□□□ -0.27
AC005540.1-201ENST00000413911 NDUFC2O95298 119 aa13.37□□□□□ -0.27
AC005540.1-201ENST00000413911 S100A7L2Q5SY68 101 aa13.37□□□□□ -0.27
AC005540.1-201ENST00000413911 TRAV23DV6A0A075B6W5 121 aa13.36□□□□□ -0.27
AC005540.1-201ENST00000413911 A0A0J9YXY3 114 aa13.36□□□□□ -0.27
AC005540.1-201ENST00000413911 KRTDAPP60985 99 aa13.36□□□□□ -0.27
AC005540.1-201ENST00000413911 CRCT1Q9UGL9 99 aa13.36□□□□□ -0.27
AC005540.1-201ENST00000413911 ZNF73O43830 326 aaPredicted RBP13.33□□□□□ -0.28
AC005540.1-201ENST00000413911 JOSD1Q15040 202 aaPredicted RBP13.32□□□□□ -0.28
AC005540.1-201ENST00000413911 HIST3H2BBQ8N257 126 aa13.31□□□□□ -0.28
AC005540.1-201ENST00000413911 LITAFQ99732 161 aa13.31□□□□□ -0.28
AC005540.1-201ENST00000413911 MT1HP80294 61 aa13.29□□□□□ -0.28
AC005540.1-201ENST00000413911 C20orf202A1L168 122 aa13.28□□□□□ -0.28
AC005540.1-201ENST00000413911 TIMM17BO60830 172 aa13.27□□□□□ -0.29
AC005540.1-201ENST00000413911 PCOTHQ58A44 107 aa13.27□□□□□ -0.29
AC005540.1-201ENST00000413911 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.29
AC005540.1-201ENST00000413911 TTTY13Q9BZ97 58 aa13.27□□□□□ -0.29
AC005540.1-201ENST00000413911 HRCT1Q6UXD1 115 aa13.26□□□□□ -0.29
AC005540.1-201ENST00000413911 ANKRD39Q53RE8 183 aa13.25□□□□□ -0.29
AC005540.1-201ENST00000413911 C5orf52A6NGY3 159 aa13.24□□□□□ -0.29
AC005540.1-201ENST00000413911 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
AC005540.1-201ENST00000413911 SPRR1BP22528 89 aa13.24□□□□□ -0.29
AC005540.1-201ENST00000413911 C9orf92A6NGG3 77 aa13.23□□□□□ -0.29
AC005540.1-201ENST00000413911 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
AC005540.1-201ENST00000413911 AKR1D1P51857 326 aa13.22□□□□□ -0.29
AC005540.1-201ENST00000413911 ATOH7Q8N100 152 aa13.22□□□□□ -0.29
AC005540.1-201ENST00000413911 IGLV8-61A0A075B6I0 122 aa13.21□□□□□ -0.29
AC005540.1-201ENST00000413911 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
AC005540.1-201ENST00000413911 S100A2P29034 98 aa13.19□□□□□ -0.3
AC005540.1-201ENST00000413911 OR13C6PQ8NH95 151 aa13.19□□□□□ -0.3
AC005540.1-201ENST00000413911 LIMD2Q9BT23 127 aa13.18□□□□□ -0.3
AC005540.1-201ENST00000413911 S100A6P06703 90 aa13.17□□□□□ -0.3
AC005540.1-201ENST00000413911 HINT1P49773 126 aaPredicted RBP13.17□□□□□ -0.3
AC005540.1-201ENST00000413911 SNRPEP62304 92 aaKnown RBP13.15□□□□□ -0.3
AC005540.1-201ENST00000413911 CBY1Q9Y3M2 126 aa13.15□□□□□ -0.3
AC005540.1-201ENST00000413911 PCP2Q8IVA1 136 aa13.14□□□□□ -0.31
AC005540.1-201ENST00000413911 SPANXDQ9BXN6 97 aa13.14□□□□□ -0.31
AC005540.1-201ENST00000413911 DHRS4-AS1Q9P1J3 65 aa13.14□□□□□ -0.31
AC005540.1-201ENST00000413911 LAMTOR3Q9UHA4 124 aa13.13□□□□□ -0.31
AC005540.1-201ENST00000413911 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
AC005540.1-201ENST00000413911 LORP23490 312 aaPredicted RBP13.11□□□□□ -0.31
AC005540.1-201ENST00000413911 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
AC005540.1-201ENST00000413911 CFC1BP0CG36 223 aa13.09□□□□□ -0.31
AC005540.1-201ENST00000413911 ELOF1P60002 83 aaKnown RBP13.09□□□□□ -0.31
AC005540.1-201ENST00000413911 Q1RN00 199 aa13.09□□□□□ -0.31
AC005540.1-201ENST00000413911 H7C2G1 150 aa13.08□□□□□ -0.32
AC005540.1-201ENST00000413911 KRTAP10-6P60371 365 aaPredicted RBP13.08□□□□□ -0.32
AC005540.1-201ENST00000413911 C6orf99Q4VX62 202 aa13.08□□□□□ -0.32
AC005540.1-201ENST00000413911 COX7BP24311 80 aa13.07□□□□□ -0.32
AC005540.1-201ENST00000413911 IFITM1P13164 125 aa13.06□□□□□ -0.32
AC005540.1-201ENST00000413911 CD164Q04900 197 aa13.06□□□□□ -0.32
AC005540.1-201ENST00000413911 Q6ZVH6 145 aa13.06□□□□□ -0.32
AC005540.1-201ENST00000413911 DEFB105AQ8NG35 78 aa13.06□□□□□ -0.32
AC005540.1-201ENST00000413911 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
AC005540.1-201ENST00000413911 FLGP20930 4061 aaPredicted RBP13.05□□□□□ -0.32
AC005540.1-201ENST00000413911 A0A0G2JQZ4 141 aa13.04□□□□□ -0.32
AC005540.1-201ENST00000413911 TAL2Q16559 108 aa13.04□□□□□ -0.32
AC005540.1-201ENST00000413911 LINC00518Q8N0U6 118 aa13.04□□□□□ -0.32
AC005540.1-201ENST00000413911 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
AC005540.1-201ENST00000413911 PRO1933Q9H354 126 aa13.03□□□□□ -0.32
AC005540.1-201ENST00000413911 Q5XG85 94 aa13.01□□□□□ -0.33
AC005540.1-201ENST00000413911 COPS9Q8WXC6 57 aa13.01□□□□□ -0.33
AC005540.1-201ENST00000413911 TEX49A0A1B0GTD5 131 aa13□□□□□ -0.33
AC005540.1-201ENST00000413911 HSBP1L1C9JCN9 74 aa13□□□□□ -0.33
AC005540.1-201ENST00000413911 MUSTN1Q8IVN3 82 aa13□□□□□ -0.33
AC005540.1-201ENST00000413911 SCGB1D1O95968 90 aa12.98□□□□□ -0.33
AC005540.1-201ENST00000413911 RPL37P61927 97 aaKnown RBP12.96□□□□□ -0.33
AC005540.1-201ENST00000413911 TRBV7-6A0A0J9YX20 115 aa12.95□□□□□ -0.34
AC005540.1-201ENST00000413911 IGLV5-48A0A075B6I7 105 aa12.93□□□□□ -0.34
AC005540.1-201ENST00000413911 A0A1B0GWB2 263 aa12.92□□□□□ -0.34
AC005540.1-201ENST00000413911 A6NDN8 102 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms