RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 A0A087WYN8 130 aa11.14□□□□□ -0.63
PTPRC-206ENST00000413409 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
PTPRC-206ENST00000413409 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
PTPRC-206ENST00000413409 J3QL48 77 aa11.12□□□□□ -0.63
PTPRC-206ENST00000413409 BAALC-AS2P0C853 105 aa11.12□□□□□ -0.63
PTPRC-206ENST00000413409 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
PTPRC-206ENST00000413409 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
PTPRC-206ENST00000413409 VPREB1P12018 145 aa11.11□□□□□ -0.63
PTPRC-206ENST00000413409 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
PTPRC-206ENST00000413409 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
PTPRC-206ENST00000413409 LECT2O14960 151 aa11.1□□□□□ -0.63
PTPRC-206ENST00000413409 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
PTPRC-206ENST00000413409 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
PTPRC-206ENST00000413409 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRC-206ENST00000413409 C6orf99Q4VX62 202 aa11.09□□□□□ -0.63
PTPRC-206ENST00000413409 C22orf24Q9Y442 160 aa11.09□□□□□ -0.63
PTPRC-206ENST00000413409 M0R378 163 aa11.08□□□□□ -0.64
PTPRC-206ENST00000413409 SNCGO76070 127 aa11.08□□□□□ -0.64
PTPRC-206ENST00000413409 Q6ZRP5 223 aa11.08□□□□□ -0.64
PTPRC-206ENST00000413409 KRTAP1-5Q9BYS1 174 aa11.08□□□□□ -0.64
PTPRC-206ENST00000413409 TRAV23DV6A0A075B6W5 121 aa11.07□□□□□ -0.64
PTPRC-206ENST00000413409 SMR3BP02814 79 aaPredicted RBP11.07□□□□□ -0.64
PTPRC-206ENST00000413409 SIGMAR1Q99720 223 aa11.07□□□□□ -0.64
PTPRC-206ENST00000413409 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
PTPRC-206ENST00000413409 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
PTPRC-206ENST00000413409 Q8N814 137 aa11.06□□□□□ -0.64
PTPRC-206ENST00000413409 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
PTPRC-206ENST00000413409 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
PTPRC-206ENST00000413409 DIRC1Q969H9 104 aa11.05□□□□□ -0.64
PTPRC-206ENST00000413409 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
PTPRC-206ENST00000413409 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
PTPRC-206ENST00000413409 LINC00575Q6W349 94 aa11.04□□□□□ -0.64
PTPRC-206ENST00000413409 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
PTPRC-206ENST00000413409 C9orf129Q5T035 196 aaKnown RBP11.03□□□□□ -0.64
PTPRC-206ENST00000413409 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
PTPRC-206ENST00000413409 SLPIP03973 132 aa11.02□□□□□ -0.65
PTPRC-206ENST00000413409 TTC32Q5I0X7 151 aa11.02□□□□□ -0.65
PTPRC-206ENST00000413409 IGLV5-37A0A075B6J1 123 aa11.01□□□□□ -0.65
PTPRC-206ENST00000413409 ACYP1P07311 99 aa11.01□□□□□ -0.65
PTPRC-206ENST00000413409 RNF213Q63HN8 5207 aa11□□□□□ -0.65
PTPRC-206ENST00000413409 H3BQ85 93 aa11□□□□□ -0.65
PTPRC-206ENST00000413409 ZNF73O43830 326 aaPredicted RBP11□□□□□ -0.65
PTPRC-206ENST00000413409 SCGB1A1P11684 91 aa11□□□□□ -0.65
PTPRC-206ENST00000413409 KRTAP10-1P60331 282 aa11□□□□□ -0.65
PTPRC-206ENST00000413409 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
PTPRC-206ENST00000413409 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
PTPRC-206ENST00000413409 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
PTPRC-206ENST00000413409 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
PTPRC-206ENST00000413409 TMEM256-PLSCR3K7ERE1 68 aa10.98□□□□□ -0.65
PTPRC-206ENST00000413409 COX7BP24311 80 aa10.98□□□□□ -0.65
PTPRC-206ENST00000413409 ELOF1P60002 83 aaKnown RBP10.98□□□□□ -0.65
PTPRC-206ENST00000413409 C14orf177Q52M58 125 aa10.98□□□□□ -0.65
PTPRC-206ENST00000413409 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
PTPRC-206ENST00000413409 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
PTPRC-206ENST00000413409 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
PTPRC-206ENST00000413409 HAMPP81172 84 aa10.96□□□□□ -0.65
PTPRC-206ENST00000413409 PCP4P48539 62 aa10.95□□□□□ -0.66
PTPRC-206ENST00000413409 FAT3Q8TDW7 4589 aa10.95□□□□□ -0.66
PTPRC-206ENST00000413409 JMJD7-PLA2G4BH0Y9G9 81 aa10.94□□□□□ -0.66
PTPRC-206ENST00000413409 PSCAO43653 123 aa10.94□□□□□ -0.66
PTPRC-206ENST00000413409 Q6ZRN7 208 aaPredicted RBP10.94□□□□□ -0.66
PTPRC-206ENST00000413409 KCNQ1DNQ9H478 68 aa10.94□□□□□ -0.66
PTPRC-206ENST00000413409 MT-ATP8P03928 68 aa10.93□□□□□ -0.66
PTPRC-206ENST00000413409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.93□□□□□ -0.66
PTPRC-206ENST00000413409 C7orf33Q8WU49 177 aa10.93□□□□□ -0.66
PTPRC-206ENST00000413409 GHRHP01286 108 aa10.92□□□□□ -0.66
PTPRC-206ENST00000413409 DNAH8Q96JB1 4490 aa10.92□□□□□ -0.66
PTPRC-206ENST00000413409 PRYO14603 147 aa10.91□□□□□ -0.66
PTPRC-206ENST00000413409 LINC00528Q8N1L1 170 aa10.91□□□□□ -0.66
PTPRC-206ENST00000413409 GAGE2BQ13066 116 aa10.9□□□□□ -0.66
PTPRC-206ENST00000413409 Q6ZQY7 126 aa10.89□□□□□ -0.67
PTPRC-206ENST00000413409 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
PTPRC-206ENST00000413409 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
PTPRC-206ENST00000413409 SDIM1Q6ZPB5 146 aa10.88□□□□□ -0.67
PTPRC-206ENST00000413409 LCE2BO14633 110 aa10.87□□□□□ -0.67
PTPRC-206ENST00000413409 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
PTPRC-206ENST00000413409 IGLV1-50A0A075B6I6 118 aa10.85□□□□□ -0.67
PTPRC-206ENST00000413409 SPRR1AP35321 89 aa10.85□□□□□ -0.67
PTPRC-206ENST00000413409 KRTAP7-1Q8IUC3 87 aa10.85□□□□□ -0.67
PTPRC-206ENST00000413409 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
PTPRC-206ENST00000413409 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
PTPRC-206ENST00000413409 Q6Q795 121 aa10.84□□□□□ -0.67
PTPRC-206ENST00000413409 LRP2P98164 4655 aa10.84□□□□□ -0.67
PTPRC-206ENST00000413409 CCKP06307 115 aa10.84□□□□□ -0.67
PTPRC-206ENST00000413409 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
PTPRC-206ENST00000413409 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
PTPRC-206ENST00000413409 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
PTPRC-206ENST00000413409 LOC110117498A0A087WWA1 95 aa10.82□□□□□ -0.68
PTPRC-206ENST00000413409 A0A096LNI7 61 aa10.82□□□□□ -0.68
PTPRC-206ENST00000413409 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
PTPRC-206ENST00000413409 TRBV7-7A0A0K0K1E9 115 aa10.81□□□□□ -0.68
PTPRC-206ENST00000413409 C21orf62-AS1Q17RA5 79 aa10.81□□□□□ -0.68
PTPRC-206ENST00000413409 SMCR5Q8TEV8 140 aa10.81□□□□□ -0.68
PTPRC-206ENST00000413409 DHRS4-AS1Q9P1J3 65 aa10.81□□□□□ -0.68
PTPRC-206ENST00000413409 A0A087WTM6 91 aa10.8□□□□□ -0.68
PTPRC-206ENST00000413409 RBM3P98179 157 aaKnown RBP10.8□□□□□ -0.68
PTPRC-206ENST00000413409 Q6ZRX8 168 aa10.8□□□□□ -0.68
PTPRC-206ENST00000413409 LAMTOR3Q9UHA4 124 aa10.8□□□□□ -0.68
PTPRC-206ENST00000413409 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
PTPRC-206ENST00000413409 B5MCH6 92 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms