RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 HERVK_113P61574 105 aa10.67□□□□□ -0.7
CPSF7-204ENST00000413232 MIEN1Q9BRT3 115 aa10.67□□□□□ -0.7
CPSF7-204ENST00000413232 HSPB8Q9UJY1 196 aa10.67□□□□□ -0.7
CPSF7-204ENST00000413232 TRAV23DV6A0A075B6W5 121 aa10.66□□□□□ -0.7
CPSF7-204ENST00000413232 A0A0J9YXY3 114 aa10.66□□□□□ -0.7
CPSF7-204ENST00000413232 KRTAP9-6A0A140TA67 174 aa10.65□□□□□ -0.7
CPSF7-204ENST00000413232 SLC25A20O43772 301 aa10.64□□□□□ -0.71
CPSF7-204ENST00000413232 ZNF73O43830 326 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-204ENST00000413232 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
CPSF7-204ENST00000413232 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
CPSF7-204ENST00000413232 COLCA2A8K830 154 aa10.62□□□□□ -0.71
CPSF7-204ENST00000413232 E9PLD3 99 aa10.61□□□□□ -0.71
CPSF7-204ENST00000413232 JOSD1Q15040 202 aaPredicted RBP10.61□□□□□ -0.71
CPSF7-204ENST00000413232 XP32Q5T750 250 aa10.61□□□□□ -0.71
CPSF7-204ENST00000413232 LITAFQ99732 161 aa10.6□□□□□ -0.71
CPSF7-204ENST00000413232 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-204ENST00000413232 SLC7A5P1Q8MH63 180 aa10.57□□□□□ -0.72
CPSF7-204ENST00000413232 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
CPSF7-204ENST00000413232 SYS1-DBNDD2H3BUS1 97 aa10.54□□□□□ -0.72
CPSF7-204ENST00000413232 SPRR1BP22528 89 aa10.54□□□□□ -0.72
CPSF7-204ENST00000413232 LCE2CQ5TA81 110 aa10.54□□□□□ -0.72
CPSF7-204ENST00000413232 C5orf52A6NGY3 159 aa10.53□□□□□ -0.72
CPSF7-204ENST00000413232 HRCT1Q6UXD1 115 aa10.53□□□□□ -0.72
CPSF7-204ENST00000413232 OR13C6PQ8NH95 151 aa10.53□□□□□ -0.72
CPSF7-204ENST00000413232 TTTY13Q9BZ97 58 aa10.53□□□□□ -0.72
CPSF7-204ENST00000413232 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
CPSF7-204ENST00000413232 HINT1P49773 126 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-204ENST00000413232 KRTAP19-2Q3LHN2 52 aa10.51□□□□□ -0.73
CPSF7-204ENST00000413232 TIMM17BO60830 172 aa10.49□□□□□ -0.73
CPSF7-204ENST00000413232 LINC01545Q5VT33 79 aa10.49□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BKO60814 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BJP06899 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BOP23527 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BBP33778 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BDP58876 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BCP62807 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST2H2BEQ16778 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BHQ93079 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BNQ99877 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 HIST1H2BMQ99879 126 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 DHRS4-AS1Q9P1J3 65 aa10.48□□□□□ -0.73
CPSF7-204ENST00000413232 LCE2DQ5TA82 110 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-204ENST00000413232 SPANXDQ9BXN6 97 aa10.47□□□□□ -0.73
CPSF7-204ENST00000413232 CBY1Q9Y3M2 126 aa10.47□□□□□ -0.73
CPSF7-204ENST00000413232 ZNF815PA8K554 130 aa10.46□□□□□ -0.73
CPSF7-204ENST00000413232 ELOF1P60002 83 aaKnown RBP10.46□□□□□ -0.73
CPSF7-204ENST00000413232 C6orf99Q4VX62 202 aa10.46□□□□□ -0.73
CPSF7-204ENST00000413232 C9orf92A6NGG3 77 aa10.45□□□□□ -0.74
CPSF7-204ENST00000413232 PCOTHQ58A44 107 aa10.45□□□□□ -0.74
CPSF7-204ENST00000413232 COX7BP24311 80 aa10.44□□□□□ -0.74
CPSF7-204ENST00000413232 Q1RN00 199 aa10.44□□□□□ -0.74
CPSF7-204ENST00000413232 LAMTOR3Q9UHA4 124 aa10.44□□□□□ -0.74
CPSF7-204ENST00000413232 SLC25A34Q6PIV7 304 aa10.43□□□□□ -0.74
CPSF7-204ENST00000413232 PET117Q6UWS5 81 aa10.43□□□□□ -0.74
CPSF7-204ENST00000413232 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
CPSF7-204ENST00000413232 LIMD2Q9BT23 127 aa10.43□□□□□ -0.74
CPSF7-204ENST00000413232 C3orf79P0CE67 100 aa10.41□□□□□ -0.74
CPSF7-204ENST00000413232 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
CPSF7-204ENST00000413232 H7C2G1 150 aa10.4□□□□□ -0.74
CPSF7-204ENST00000413232 TAL2Q16559 108 aa10.4□□□□□ -0.74
CPSF7-204ENST00000413232 SMIM29Q86T20 159 aa10.4□□□□□ -0.74
CPSF7-204ENST00000413232 LINC00518Q8N0U6 118 aa10.4□□□□□ -0.74
CPSF7-204ENST00000413232 IGLV8-61A0A075B6I0 122 aa10.39□□□□□ -0.75
CPSF7-204ENST00000413232 MT1HP80294 61 aa10.38□□□□□ -0.75
CPSF7-204ENST00000413232 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
CPSF7-204ENST00000413232 CD164Q04900 197 aa10.37□□□□□ -0.75
CPSF7-204ENST00000413232 PRO1933Q9H354 126 aa10.36□□□□□ -0.75
CPSF7-204ENST00000413232 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
CPSF7-204ENST00000413232 FSIP2Q5CZC0 6907 aa10.35□□□□□ -0.75
CPSF7-204ENST00000413232 TRBV7-6A0A0J9YX20 115 aa10.34□□□□□ -0.75
CPSF7-204ENST00000413232 IGLV5-48A0A075B6I7 105 aa10.33□□□□□ -0.76
CPSF7-204ENST00000413232 KRTDAPP60985 99 aa10.33□□□□□ -0.76
CPSF7-204ENST00000413232 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
CPSF7-204ENST00000413232 Q5XG85 94 aa10.32□□□□□ -0.76
CPSF7-204ENST00000413232 SCGB1D4Q6XE38 83 aa10.32□□□□□ -0.76
CPSF7-204ENST00000413232 A0A1B0GWB2 263 aa10.31□□□□□ -0.76
CPSF7-204ENST00000413232 AKR1D1P51857 326 aa10.31□□□□□ -0.76
CPSF7-204ENST00000413232 CRCT1Q9UGL9 99 aa10.31□□□□□ -0.76
CPSF7-204ENST00000413232 A6NDN8 102 aa10.3□□□□□ -0.76
CPSF7-204ENST00000413232 COA6Q5JTJ3 125 aaKnown RBP10.3□□□□□ -0.76
CPSF7-204ENST00000413232 PCP2Q8IVA1 136 aa10.3□□□□□ -0.76
CPSF7-204ENST00000413232 MUSTN1Q8IVN3 82 aa10.3□□□□□ -0.76
CPSF7-204ENST00000413232 ATOH7Q8N100 152 aa10.3□□□□□ -0.76
CPSF7-204ENST00000413232 IFITM1P13164 125 aa10.28□□□□□ -0.76
CPSF7-204ENST00000413232 SMIM11BQ8TCY0 68 aa10.26□□□□□ -0.77
CPSF7-204ENST00000413232 Q6ZVH6 145 aa10.24□□□□□ -0.77
CPSF7-204ENST00000413232 LORP23490 312 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-204ENST00000413232 RPL37P61927 97 aaKnown RBP10.23□□□□□ -0.77
CPSF7-204ENST00000413232 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
CPSF7-204ENST00000413232 C20orf202A1L168 122 aa10.21□□□□□ -0.77
CPSF7-204ENST00000413232 A4D1N5 150 aa10.21□□□□□ -0.77
CPSF7-204ENST00000413232 KRTAP10-6P60371 365 aaPredicted RBP10.21□□□□□ -0.77
CPSF7-204ENST00000413232 FLGP20930 4061 aaPredicted RBP10.2□□□□□ -0.78
CPSF7-204ENST00000413232 TRAV13-2A0A0B4J235 113 aa10.19□□□□□ -0.78
CPSF7-204ENST00000413232 CFC1BP0CG36 223 aa10.19□□□□□ -0.78
CPSF7-204ENST00000413232 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
CPSF7-204ENST00000413232 LINC00575Q6W349 94 aa10.15□□□□□ -0.78
CPSF7-204ENST00000413232 TCL1BO95988 128 aa10.13□□□□□ -0.79
CPSF7-204ENST00000413232 Q6ZQY7 126 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms