RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 VAMP8Q9BV40 100 aa-1.8□□□□□ -2.7
RNU4-55P-201ENST00000410731 APOC2P02655 101 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 UBE2L3P68036 154 aaKnown RBP-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 PSMG4Q5JS54 123 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 MT1MQ8N339 61 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 PFDN5Q99471 154 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 RGPD8O14715 1765 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 RGPD5Q99666 1765 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 MON2Q7Z3U7 1717 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 SAMD9Q5K651 1589 aa-1.81□□□□□ -2.7
RNU4-55P-201ENST00000410731 UBR3Q6ZT12 1888 aa-1.82□□□□□ -2.7
RNU4-55P-201ENST00000410731 UBE2L5PA0A1B0GUS4 154 aa-1.82□□□□□ -2.7
RNU4-55P-201ENST00000410731 K7EP13 123 aa-1.82□□□□□ -2.7
RNU4-55P-201ENST00000410731 MEIG1Q5JSS6 88 aa-1.82□□□□□ -2.7
RNU4-55P-201ENST00000410731 AP4S1Q9Y587 144 aa-1.82□□□□□ -2.7
RNU4-55P-201ENST00000410731 PLXNC1O60486 1568 aa-1.82□□□□□ -2.7
RNU4-55P-201ENST00000410731 QSER1Q2KHR3 1735 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 TOPAZ1Q8N9V7 1692 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 OOSP1A8MZH6 123 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 MT2AP02795 61 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 ARPC4P59998 168 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 SCAPERQ9BY12 1400 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 C5P01031 1676 aa-1.83□□□□□ -2.7
RNU4-55P-201ENST00000410731 NAP1L6A6NFF2 107 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 C3orf79P0CE67 100 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 DEFB106AQ8N104 65 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 LZICQ8WZA0 190 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 DPH3P1Q9H4G8 78 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 CDC42BPAQ5VT25 1732 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 MAGI2Q86UL8 1455 aa-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.84□□□□□ -2.7
RNU4-55P-201ENST00000410731 BOD1L1Q8NFC6 3051 aa-1.85□□□□□ -2.7
RNU4-55P-201ENST00000410731 TIAM2Q8IVF5 1701 aa-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 TMEM262E9PQX1 116 aa-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 MT1BP07438 61 aa-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 ATP5EP56381 51 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 LINC00158P58513 81 aa-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 KRTAP8-1Q8IUC2 63 aa-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 ANP32BQ92688 251 aaKnown RBP-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 PRO3102Q9H379 93 aa-1.85□□□□□ -2.71
RNU4-55P-201ENST00000410731 CUL7Q14999 1698 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 CRYM-AS1A6NIL9 109 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 COX7BP24311 80 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 ASIPP42127 132 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 KRTAP20-1Q3LI63 56 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 CGREF1Q99674 301 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 RGPD3A6NKT7 1758 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 RGPD4Q7Z3J3 1758 aa-1.86□□□□□ -2.71
RNU4-55P-201ENST00000410731 LRRC9Q6ZRR7 1453 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 USP32Q8NFA0 1604 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 FAM25AB3EWG3 89 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 FAM25CB3EWG5 89 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 FAM25GB3EWG6 89 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 IGLC2P0DOY2 106 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 IGLC3P0DOY3 106 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 RPL38P63173 70 aaKnown RBP-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 C1orf54Q8WWF1 131 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 FAM135AQ9P2D6 1515 aa-1.87□□□□□ -2.71
RNU4-55P-201ENST00000410731 ABCC10Q5T3U5 1492 aa-1.88□□□□□ -2.71
RNU4-55P-201ENST00000410731 CDC42BPGQ6DT37 1551 aa-1.88□□□□□ -2.71
RNU4-55P-201ENST00000410731 FOCADQ5VW36 1801 aa-1.88□□□□□ -2.71
RNU4-55P-201ENST00000410731 KTN1Q86UP2 1357 aaKnown RBP-1.88□□□□□ -2.71
RNU4-55P-201ENST00000410731 FAM24AA6NFZ4 105 aa-1.89□□□□□ -2.71
RNU4-55P-201ENST00000410731 TNP1P09430 55 aa-1.89□□□□□ -2.71
RNU4-55P-201ENST00000410731 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.89□□□□□ -2.71
RNU4-55P-201ENST00000410731 WIZO95785 1651 aa-1.9□□□□□ -2.71
RNU4-55P-201ENST00000410731 NAIPQ13075 1403 aa-1.9□□□□□ -2.71
RNU4-55P-201ENST00000410731 PKD1L3Q7Z443 1732 aa-1.9□□□□□ -2.71
RNU4-55P-201ENST00000410731 TRBV25-1A0A075B6N4 114 aa-1.9□□□□□ -2.71
RNU4-55P-201ENST00000410731 SERP2Q8N6R1 65 aa-1.9□□□□□ -2.71
RNU4-55P-201ENST00000410731 ZFHX4Q86UP3 3567 aa-1.9□□□□□ -2.71
RNU4-55P-201ENST00000410731 MAGI3Q5TCQ9 1506 aa-1.91□□□□□ -2.71
RNU4-55P-201ENST00000410731 FREM2Q5SZK8 3169 aa-1.91□□□□□ -2.71
RNU4-55P-201ENST00000410731 MMP24-AS1A0A0U1RRL7 71 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 TMEM218A2RU14 115 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 GNG7O60262 68 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 DEFB130BP0DP73 79 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 DEFB130AP0DP74 79 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 PMCHL1Q16048 86 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 LINC00470Q9BZP3 86 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 DEPDC5O75140 1603 aa-1.91□□□□□ -2.72
RNU4-55P-201ENST00000410731 KRTDAPP60985 99 aa-1.92□□□□□ -2.72
RNU4-55P-201ENST00000410731 SELENOWP63302 87 aa-1.92□□□□□ -2.72
RNU4-55P-201ENST00000410731 PYDC1Q8WXC3 89 aa-1.92□□□□□ -2.72
RNU4-55P-201ENST00000410731 CACFD1Q9UGQ2 172 aa-1.92□□□□□ -2.72
RNU4-55P-201ENST00000410731 CHD1O14646 1710 aa-1.92□□□□□ -2.72
RNU4-55P-201ENST00000410731 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-55P-201ENST00000410731 CRYBG1Q9Y4K1 1723 aa-1.93□□□□□ -2.72
RNU4-55P-201ENST00000410731 IAPPP10997 89 aa-1.93□□□□□ -2.72
RNU4-55P-201ENST00000410731 ARHGAP5Q13017 1502 aa-1.93□□□□□ -2.72
RNU4-55P-201ENST00000410731 PRUNE2Q8WUY3 3088 aa-1.93□□□□□ -2.72
RNU4-55P-201ENST00000410731 ANKRD36CQ5JPF3 1778 aa-1.93□□□□□ -2.72
RNU4-55P-201ENST00000410731 ABCC2Q92887 1545 aa-1.94□□□□□ -2.72
RNU4-55P-201ENST00000410731 LYNX1G3V0Z9 82 aa-1.94□□□□□ -2.72
RNU4-55P-201ENST00000410731 AKAIN1P0CW23 69 aa-1.94□□□□□ -2.72
RNU4-55P-201ENST00000410731 ZNF831Q5JPB2 1677 aa-1.94□□□□□ -2.72
RNU4-55P-201ENST00000410731 LRRC7Q96NW7 1537 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 hADV29S1A0JD25 119 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 D6R8Y8 96 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 F8WEM9 126 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms