RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 A0A087WTM6 91 aa7.5□□□□□ -1.21
SNX13-202ENST00000409604 H3BT86 120 aa7.5□□□□□ -1.21
SNX13-202ENST00000409604 LINC00476Q8WZB0 136 aa7.49□□□□□ -1.21
SNX13-202ENST00000409604 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
SNX13-202ENST00000409604 Q8N814 137 aa7.49□□□□□ -1.21
SNX13-202ENST00000409604 ANAPC13Q9BS18 74 aa7.49□□□□□ -1.21
SNX13-202ENST00000409604 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
SNX13-202ENST00000409604 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
SNX13-202ENST00000409604 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
SNX13-202ENST00000409604 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
SNX13-202ENST00000409604 FAM104AQ969W3 186 aa7.48□□□□□ -1.21
SNX13-202ENST00000409604 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
SNX13-202ENST00000409604 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
SNX13-202ENST00000409604 NDUFV3P56181 108 aaKnown RBP7.47□□□□□ -1.21
SNX13-202ENST00000409604 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.21
SNX13-202ENST00000409604 LITAFQ99732 161 aa7.46□□□□□ -1.21
SNX13-202ENST00000409604 DHRS4-AS1Q9P1J3 65 aa7.46□□□□□ -1.21
SNX13-202ENST00000409604 A0A0G2JQZ4 141 aa7.45□□□□□ -1.22
SNX13-202ENST00000409604 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
SNX13-202ENST00000409604 Q9BRP9 147 aa7.44□□□□□ -1.22
SNX13-202ENST00000409604 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
SNX13-202ENST00000409604 NDUFC2O95298 119 aa7.43□□□□□ -1.22
SNX13-202ENST00000409604 FAM19A3Q7Z5A8 133 aa7.43□□□□□ -1.22
SNX13-202ENST00000409604 LINC01561Q8N1V8 128 aa7.43□□□□□ -1.22
SNX13-202ENST00000409604 BPY2O14599 106 aa7.43□□□□□ -1.22
SNX13-202ENST00000409604 VPREB1P12018 145 aa7.42□□□□□ -1.22
SNX13-202ENST00000409604 LINC00575Q6W349 94 aa7.42□□□□□ -1.22
SNX13-202ENST00000409604 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
SNX13-202ENST00000409604 NDUFB1O75438 58 aa7.41□□□□□ -1.22
SNX13-202ENST00000409604 A0A087WSZ3 146 aa7.41□□□□□ -1.22
SNX13-202ENST00000409604 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
SNX13-202ENST00000409604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.4□□□□□ -1.22
SNX13-202ENST00000409604 C9orf163Q8N9P6 203 aa7.4□□□□□ -1.23
SNX13-202ENST00000409604 MOBPQ13875 183 aa7.39□□□□□ -1.23
SNX13-202ENST00000409604 MT-ATP8P03928 68 aa7.39□□□□□ -1.23
SNX13-202ENST00000409604 FAM236AA0A1B0GUQ0 79 aa7.38□□□□□ -1.23
SNX13-202ENST00000409604 FAM236BA0A1B0GV22 79 aa7.38□□□□□ -1.23
SNX13-202ENST00000409604 PRYO14603 147 aa7.37□□□□□ -1.23
SNX13-202ENST00000409604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
SNX13-202ENST00000409604 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
SNX13-202ENST00000409604 Q8N9L7 120 aa7.36□□□□□ -1.23
SNX13-202ENST00000409604 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
SNX13-202ENST00000409604 SPACA4Q8TDM5 124 aa7.35□□□□□ -1.23
SNX13-202ENST00000409604 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
SNX13-202ENST00000409604 FAM30AQ9NZY2 134 aa7.34□□□□□ -1.23
SNX13-202ENST00000409604 A0A1B0GX51 115 aa7.33□□□□□ -1.24
SNX13-202ENST00000409604 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
SNX13-202ENST00000409604 A0A087WVE0 104 aa7.33□□□□□ -1.24
SNX13-202ENST00000409604 F8WDY8 70 aa7.33□□□□□ -1.24
SNX13-202ENST00000409604 Q6ZRX8 168 aa7.33□□□□□ -1.24
SNX13-202ENST00000409604 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
SNX13-202ENST00000409604 ERC2-IT1O76042 136 aa7.31□□□□□ -1.24
SNX13-202ENST00000409604 ACYP1P07311 99 aa7.31□□□□□ -1.24
SNX13-202ENST00000409604 Q8NDZ9 215 aa7.31□□□□□ -1.24
SNX13-202ENST00000409604 PSORS1C2Q9UIG4 136 aa7.31□□□□□ -1.24
SNX13-202ENST00000409604 PLA2G1BP04054 148 aaKnown RBP7.3□□□□□ -1.24
SNX13-202ENST00000409604 COL7A1Q02388 2944 aa7.3□□□□□ -1.24
SNX13-202ENST00000409604 IGLV1-50A0A075B6I6 118 aa7.3□□□□□ -1.24
SNX13-202ENST00000409604 PDE6GP18545 87 aa7.3□□□□□ -1.24
SNX13-202ENST00000409604 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
SNX13-202ENST00000409604 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
SNX13-202ENST00000409604 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
SNX13-202ENST00000409604 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
SNX13-202ENST00000409604 FBN3Q75N90 2809 aa7.29□□□□□ -1.24
SNX13-202ENST00000409604 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
SNX13-202ENST00000409604 RPL37AP61513 92 aaKnown RBP7.28□□□□□ -1.24
SNX13-202ENST00000409604 LINC00846Q9NV44 126 aa7.28□□□□□ -1.24
SNX13-202ENST00000409604 H3BQ85 93 aa7.28□□□□□ -1.24
SNX13-202ENST00000409604 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
SNX13-202ENST00000409604 BCE1O60756 84 aa7.27□□□□□ -1.25
SNX13-202ENST00000409604 PANO1I0J062 215 aa7.25□□□□□ -1.25
SNX13-202ENST00000409604 TYMSOSQ8TAI1 123 aa7.25□□□□□ -1.25
SNX13-202ENST00000409604 PRR4Q16378 134 aa7.24□□□□□ -1.25
SNX13-202ENST00000409604 CRYGAP11844 174 aa7.23□□□□□ -1.25
SNX13-202ENST00000409604 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
SNX13-202ENST00000409604 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
SNX13-202ENST00000409604 LINC00528Q8N1L1 170 aa7.22□□□□□ -1.25
SNX13-202ENST00000409604 B5MCH6 92 aa7.21□□□□□ -1.25
SNX13-202ENST00000409604 SS18L2Q9UHA2 77 aa7.21□□□□□ -1.25
SNX13-202ENST00000409604 KRTAP26-1Q6PEX3 210 aa7.21□□□□□ -1.26
SNX13-202ENST00000409604 C20orf197Q8N268 126 aa7.21□□□□□ -1.26
SNX13-202ENST00000409604 LINC01547P58512 204 aaPredicted RBP7.2□□□□□ -1.26
SNX13-202ENST00000409604 Q6ZVQ6 151 aa7.2□□□□□ -1.26
SNX13-202ENST00000409604 LCE6AA0A183 80 aa7.2□□□□□ -1.26
SNX13-202ENST00000409604 KRTAP10-1P60331 282 aa7.19□□□□□ -1.26
SNX13-202ENST00000409604 PRO0461Q9UI25 63 aa7.19□□□□□ -1.26
SNX13-202ENST00000409604 ZNF861PO60384 105 aa7.19□□□□□ -1.26
SNX13-202ENST00000409604 LINC00336Q6ZUF6 198 aa7.18□□□□□ -1.26
SNX13-202ENST00000409604 Q8N377 158 aa7.18□□□□□ -1.26
SNX13-202ENST00000409604 J3QL48 77 aa7.18□□□□□ -1.26
SNX13-202ENST00000409604 Q6JHZ5 121 aa7.18□□□□□ -1.26
SNX13-202ENST00000409604 TLX1NBP0CAT3 122 aa7.17□□□□□ -1.26
SNX13-202ENST00000409604 SNURFQ9Y675 71 aa7.17□□□□□ -1.26
SNX13-202ENST00000409604 MP68P56378 58 aa7.17□□□□□ -1.26
SNX13-202ENST00000409604 IGLV7-43P04211 117 aa7.16□□□□□ -1.26
SNX13-202ENST00000409604 AKAP9Q99996 3911 aa7.15□□□□□ -1.26
SNX13-202ENST00000409604 Q6ZR54 194 aa7.12□□□□□ -1.27
SNX13-202ENST00000409604 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
SNX13-202ENST00000409604 Q8NBF4 154 aa7.12□□□□□ -1.27
SNX13-202ENST00000409604 ATOX1O00244 68 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms