RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 RPS27P42677 84 aaKnown RBP-6.53□□□□□ -3.45
MIR548F3-201ENST00000408509 RGS21Q2M5E4 152 aa-6.53□□□□□ -3.45
MIR548F3-201ENST00000408509 RPS27LQ71UM5 84 aaKnown RBP-6.53□□□□□ -3.45
MIR548F3-201ENST00000408509 SHPRHQ149N8 1683 aa-6.53□□□□□ -3.45
MIR548F3-201ENST00000408509 EEA1Q15075 1411 aa-6.53□□□□□ -3.46
MIR548F3-201ENST00000408509 FAM135AQ9P2D6 1515 aa-6.54□□□□□ -3.46
MIR548F3-201ENST00000408509 IGLC2P0DOY2 106 aa-6.54□□□□□ -3.46
MIR548F3-201ENST00000408509 IGLC3P0DOY3 106 aa-6.54□□□□□ -3.46
MIR548F3-201ENST00000408509 OR9Q1Q8NGQ5 310 aa-6.54□□□□□ -3.46
MIR548F3-201ENST00000408509 TCEAL4Q96EI5 215 aa-6.54□□□□□ -3.46
MIR548F3-201ENST00000408509 NCOA2Q15596 1464 aa-6.54□□□□□ -3.46
MIR548F3-201ENST00000408509 CFAP53Q96M91 514 aa-6.55□□□□□ -3.46
MIR548F3-201ENST00000408509 C5P01031 1676 aa-6.55□□□□□ -3.46
MIR548F3-201ENST00000408509 C20orf202A1L168 122 aa-6.56□□□□□ -3.46
MIR548F3-201ENST00000408509 LRRC7Q96NW7 1537 aa-6.56□□□□□ -3.46
MIR548F3-201ENST00000408509 TNFSF15O95150 251 aa-6.57□□□□□ -3.46
MIR548F3-201ENST00000408509 TCTE3Q8IZS6 198 aa-6.57□□□□□ -3.46
MIR548F3-201ENST00000408509 ARL11Q969Q4 196 aa-6.57□□□□□ -3.46
MIR548F3-201ENST00000408509 TCHHQ07283 1943 aa-6.58□□□□□ -3.46
MIR548F3-201ENST00000408509 ZFYVE16Q7Z3T8 1539 aa-6.58□□□□□ -3.46
MIR548F3-201ENST00000408509 TMEM244Q5VVB8 128 aa-6.58□□□□□ -3.46
MIR548F3-201ENST00000408509 FAM24BQ8N5W8 94 aa-6.58□□□□□ -3.46
MIR548F3-201ENST00000408509 MED14O60244 1454 aa-6.59□□□□□ -3.46
MIR548F3-201ENST00000408509 MRPS10P82664 201 aaKnown RBP-6.59□□□□□ -3.46
MIR548F3-201ENST00000408509 VAMP8Q9BV40 100 aa-6.59□□□□□ -3.46
MIR548F3-201ENST00000408509 ATG12O94817 140 aa-6.6□□□□□ -3.47
MIR548F3-201ENST00000408509 POLR2HP52434 150 aaKnown RBP-6.6□□□□□ -3.47
MIR548F3-201ENST00000408509 MAGOHP61326 146 aaKnown RBP-6.6□□□□□ -3.47
MIR548F3-201ENST00000408509 MAGOHBQ96A72 148 aaKnown RBP-6.6□□□□□ -3.47
MIR548F3-201ENST00000408509 CCDC115Q96NT0 180 aa-6.6□□□□□ -3.47
MIR548F3-201ENST00000408509 C12orf57Q99622 126 aa-6.61□□□□□ -3.47
MIR548F3-201ENST00000408509 MRC2Q9UBG0 1479 aa-6.61□□□□□ -3.47
MIR548F3-201ENST00000408509 COX6CP09669 75 aa-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 NCS1P62166 190 aa-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 HIST1H1AQ02539 215 aaPredicted RBP-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 NWD1Q149M9 1564 aa-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 LRRIQ1Q96JM4 1722 aa-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 LLPHQ9BRT6 129 aaKnown RBP-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 MANBALQ9NQG1 85 aa-6.63□□□□□ -3.47
MIR548F3-201ENST00000408509 SFTA3P0C7M3 94 aa-6.64□□□□□ -3.47
MIR548F3-201ENST00000408509 CCDC172P0C7W6 258 aa-6.64□□□□□ -3.47
MIR548F3-201ENST00000408509 Q56UQ5 140 aa-6.64□□□□□ -3.47
MIR548F3-201ENST00000408509 THEM6Q8WUY1 208 aa-6.64□□□□□ -3.47
MIR548F3-201ENST00000408509 LINC00474Q9P2X8 69 aa-6.64□□□□□ -3.47
MIR548F3-201ENST00000408509 THOC2Q8NI27 1593 aaKnown RBP-6.65□□□□□ -3.47
MIR548F3-201ENST00000408509 CDH23Q9H251 3354 aa-6.65□□□□□ -3.47
MIR548F3-201ENST00000408509 GAFA1Q96PS6 74 aa-6.66□□□□□ -3.48
MIR548F3-201ENST00000408509 CCDC32Q9BV29 185 aa-6.66□□□□□ -3.48
MIR548F3-201ENST00000408509 KIAA0586Q9BVV6 1533 aa-6.66□□□□□ -3.48
MIR548F3-201ENST00000408509 SPHKAPQ2M3C7 1700 aa-6.67□□□□□ -3.48
MIR548F3-201ENST00000408509 OR13C6PQ8NH95 151 aa-6.67□□□□□ -3.48
MIR548F3-201ENST00000408509 SPEF2Q9C093 1822 aa-6.67□□□□□ -3.48
MIR548F3-201ENST00000408509 TOP2BQ02880 1626 aa-6.68□□□□□ -3.48
MIR548F3-201ENST00000408509 CCDC42Q96M95 316 aa-6.68□□□□□ -3.48
MIR548F3-201ENST00000408509 CD163L1Q9NR16 1453 aa-6.68□□□□□ -3.48
MIR548F3-201ENST00000408509 REEP5Q00765 189 aa-6.69□□□□□ -3.48
MIR548F3-201ENST00000408509 CCDC58Q4VC31 144 aa-6.69□□□□□ -3.48
MIR548F3-201ENST00000408509 ARL2BPQ9Y2Y0 163 aa-6.69□□□□□ -3.48
MIR548F3-201ENST00000408509 ZC3H13Q5T200 1668 aaKnown RBP-6.69□□□□□ -3.48
MIR548F3-201ENST00000408509 OVOS2A0A0G2JMS6 1433 aa-6.7□□□□□ -3.48
MIR548F3-201ENST00000408509 Q0VG73 95 aa-6.71□□□□□ -3.48
MIR548F3-201ENST00000408509 NCBP2-AS2Q69YL0 99 aa-6.71□□□□□ -3.48
MIR548F3-201ENST00000408509 FAM9CQ8IZT9 166 aa-6.71□□□□□ -3.48
MIR548F3-201ENST00000408509 SMIM23A6NLE4 172 aa-6.72□□□□□ -3.49
MIR548F3-201ENST00000408509 SPA17Q15506 151 aa-6.72□□□□□ -3.49
MIR548F3-201ENST00000408509 PRO1854Q9UHT4 67 aa-6.72□□□□□ -3.49
MIR548F3-201ENST00000408509 KCNRGQ8N5I3 272 aa-6.73□□□□□ -3.49
MIR548F3-201ENST00000408509 ANP32BQ92688 251 aaKnown RBP-6.73□□□□□ -3.49
MIR548F3-201ENST00000408509 SPANXDQ9BXN6 97 aa-6.73□□□□□ -3.49
MIR548F3-201ENST00000408509 ANKRD36BQ8N2N9 1353 aa-6.73□□□□□ -3.49
MIR548F3-201ENST00000408509 CPSF1Q10570 1443 aaKnown RBP-6.74□□□□□ -3.49
MIR548F3-201ENST00000408509 TMEM218A2RU14 115 aa-6.74□□□□□ -3.49
MIR548F3-201ENST00000408509 MINOS1Q5TGZ0 78 aa-6.74□□□□□ -3.49
MIR548F3-201ENST00000408509 C12orf73Q69YU5 71 aa-6.74□□□□□ -3.49
MIR548F3-201ENST00000408509 TRAV21A0A0B4J279 112 aa-6.75□□□□□ -3.49
MIR548F3-201ENST00000408509 BOLA2Q9H3K6 86 aa-6.75□□□□□ -3.49
MIR548F3-201ENST00000408509 NKIRAS1Q9NYS0 192 aa-6.75□□□□□ -3.49
MIR548F3-201ENST00000408509 CDK5RAP2Q96SN8 1893 aa-6.76□□□□□ -3.49
MIR548F3-201ENST00000408509 LSM6P62312 80 aaKnown RBP-6.76□□□□□ -3.49
MIR548F3-201ENST00000408509 PTRHD1Q6GMV3 140 aaKnown RBP-6.76□□□□□ -3.49
MIR548F3-201ENST00000408509 ZNF436-AS1Q8NC38 126 aaPredicted RBP-6.76□□□□□ -3.49
MIR548F3-201ENST00000408509 NRXN3Q9Y4C0 1643 aa-6.76□□□□□ -3.49
MIR548F3-201ENST00000408509 SCAPERQ9BY12 1400 aa-6.76□□□□□ -3.49
MIR548F3-201ENST00000408509 RPP14O95059 124 aaKnown RBP-6.77□□□□□ -3.49
MIR548F3-201ENST00000408509 FCER1GP30273 86 aa-6.77□□□□□ -3.49
MIR548F3-201ENST00000408509 DOT1LQ8TEK3 1739 aa-6.77□□□□□ -3.49
MIR548F3-201ENST00000408509 F6UZH7 168 aa-6.79□□□□□ -3.5
MIR548F3-201ENST00000408509 M0QX08 132 aa-6.79□□□□□ -3.5
MIR548F3-201ENST00000408509 DBIP07108 87 aaKnown RBP-6.79□□□□□ -3.5
MIR548F3-201ENST00000408509 SMIM20Q8N5G0 67 aa-6.79□□□□□ -3.5
MIR548F3-201ENST00000408509 BRCA2P51587 3418 aa-6.79□□□□□ -3.5
MIR548F3-201ENST00000408509 GNG11P61952 73 aa-6.8□□□□□ -3.5
MIR548F3-201ENST00000408509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-6.81□□□□□ -3.5
MIR548F3-201ENST00000408509 IQCF6A8MYZ5 107 aa-6.81□□□□□ -3.5
MIR548F3-201ENST00000408509 MIF4GDA9UHW6 222 aaKnown RBP-6.81□□□□□ -3.5
MIR548F3-201ENST00000408509 PTMAP06454 111 aaKnown RBP-6.81□□□□□ -3.5
MIR548F3-201ENST00000408509 GNG3P63215 75 aa-6.81□□□□□ -3.5
MIR548F3-201ENST00000408509 BAZ1AQ9NRL2 1556 aaPredicted RBP-6.82□□□□□ -3.5
MIR548F3-201ENST00000408509 DDX60LQ5H9U9 1706 aaKnown RBP-6.82□□□□□ -3.5
MIR548F3-201ENST00000408509 CLASP1Q7Z460 1538 aa-6.82□□□□□ -3.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms