RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
SMARCB1-203ENST00000407082 LINC00575Q6W349 94 aa8.53□□□□□ -1.04
SMARCB1-203ENST00000407082 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 NDUFC2-KCTD14E9PQ53 114 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 M0R378 163 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 Q8N1X5 172 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 DIRC1Q969H9 104 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 PKD1P98161 4303 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 HERC1Q15751 4861 aa8.52□□□□□ -1.05
SMARCB1-203ENST00000407082 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
SMARCB1-203ENST00000407082 C1orf134Q5TEV5 83 aa8.51□□□□□ -1.05
SMARCB1-203ENST00000407082 ANAPC13Q9BS18 74 aa8.51□□□□□ -1.05
SMARCB1-203ENST00000407082 C22orf24Q9Y442 160 aa8.51□□□□□ -1.05
SMARCB1-203ENST00000407082 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
SMARCB1-203ENST00000407082 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
SMARCB1-203ENST00000407082 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
SMARCB1-203ENST00000407082 SDIM1Q6ZPB5 146 aa8.5□□□□□ -1.05
SMARCB1-203ENST00000407082 UPK3BQ9BT76 320 aa8.5□□□□□ -1.05
SMARCB1-203ENST00000407082 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
SMARCB1-203ENST00000407082 PDE6GP18545 87 aa8.49□□□□□ -1.05
SMARCB1-203ENST00000407082 C15orf56Q8N910 161 aa8.49□□□□□ -1.05
SMARCB1-203ENST00000407082 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
SMARCB1-203ENST00000407082 CCKP06307 115 aa8.48□□□□□ -1.05
SMARCB1-203ENST00000407082 COX7BP24311 80 aa8.48□□□□□ -1.05
SMARCB1-203ENST00000407082 Q6ZR54 194 aa8.48□□□□□ -1.05
SMARCB1-203ENST00000407082 Q6ZRU5 148 aa8.48□□□□□ -1.05
SMARCB1-203ENST00000407082 HSPG2P98160 4391 aa8.48□□□□□ -1.05
SMARCB1-203ENST00000407082 SLPIP03973 132 aa8.47□□□□□ -1.05
SMARCB1-203ENST00000407082 NDUFV3P56181 108 aaKnown RBP8.47□□□□□ -1.05
SMARCB1-203ENST00000407082 TNP2Q05952 138 aa8.47□□□□□ -1.05
SMARCB1-203ENST00000407082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-203ENST00000407082 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
SMARCB1-203ENST00000407082 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
SMARCB1-203ENST00000407082 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-203ENST00000407082 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
SMARCB1-203ENST00000407082 VPREB1P12018 145 aa8.46□□□□□ -1.06
SMARCB1-203ENST00000407082 XAGE1AQ9HD64 81 aa8.45□□□□□ -1.06
SMARCB1-203ENST00000407082 PLA2G2DQ9UNK4 145 aa8.45□□□□□ -1.06
SMARCB1-203ENST00000407082 RBM3P98179 157 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-203ENST00000407082 Q6JHZ5 121 aa8.44□□□□□ -1.06
SMARCB1-203ENST00000407082 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
SMARCB1-203ENST00000407082 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
SMARCB1-203ENST00000407082 ELOF1P60002 83 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-203ENST00000407082 ATP5EP2Q5VTU8 51 aa8.43□□□□□ -1.06
SMARCB1-203ENST00000407082 Q8NDZ9 215 aa8.43□□□□□ -1.06
SMARCB1-203ENST00000407082 LAMTOR3Q9UHA4 124 aa8.43□□□□□ -1.06
SMARCB1-203ENST00000407082 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
SMARCB1-203ENST00000407082 EPM2AB3EWF7 344 aa8.41□□□□□ -1.06
SMARCB1-203ENST00000407082 DSCR8Q96T75 97 aa8.41□□□□□ -1.06
SMARCB1-203ENST00000407082 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
SMARCB1-203ENST00000407082 UBL5Q9BZL1 73 aa8.4□□□□□ -1.06
SMARCB1-203ENST00000407082 SMCR5Q8TEV8 140 aa8.39□□□□□ -1.07
SMARCB1-203ENST00000407082 IGLV5-37A0A075B6J1 123 aa8.38□□□□□ -1.07
SMARCB1-203ENST00000407082 USP17L23D6RBM5 183 aa8.38□□□□□ -1.07
SMARCB1-203ENST00000407082 Q6ZQY7 126 aa8.38□□□□□ -1.07
SMARCB1-203ENST00000407082 Q6ZRP5 223 aa8.38□□□□□ -1.07
SMARCB1-203ENST00000407082 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
SMARCB1-203ENST00000407082 LOC107984640A0A0U1RRK4 108 aa8.37□□□□□ -1.07
SMARCB1-203ENST00000407082 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
SMARCB1-203ENST00000407082 C9orf129Q5T035 196 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-203ENST00000407082 KCNQ1DNQ9H478 68 aa8.37□□□□□ -1.07
SMARCB1-203ENST00000407082 LINC00846Q9NV44 126 aa8.37□□□□□ -1.07
SMARCB1-203ENST00000407082 PRYO14603 147 aa8.36□□□□□ -1.07
SMARCB1-203ENST00000407082 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-203ENST00000407082 SRRM2Q9UQ35 2752 aaKnown RBP8.35□□□□□ -1.07
SMARCB1-203ENST00000407082 Q6ZQT0 140 aa8.35□□□□□ -1.07
SMARCB1-203ENST00000407082 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
SMARCB1-203ENST00000407082 DHRS4-AS1Q9P1J3 65 aa8.35□□□□□ -1.07
SMARCB1-203ENST00000407082 FAM236AA0A1B0GUQ0 79 aa8.34□□□□□ -1.07
SMARCB1-203ENST00000407082 FAM236BA0A1B0GV22 79 aa8.34□□□□□ -1.07
SMARCB1-203ENST00000407082 ATOX1O00244 68 aa8.34□□□□□ -1.07
SMARCB1-203ENST00000407082 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.08
SMARCB1-203ENST00000407082 KRTAP10-2P60368 255 aa8.32□□□□□ -1.08
SMARCB1-203ENST00000407082 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
SMARCB1-203ENST00000407082 PSCAO43653 123 aa8.31□□□□□ -1.08
SMARCB1-203ENST00000407082 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
SMARCB1-203ENST00000407082 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
SMARCB1-203ENST00000407082 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
SMARCB1-203ENST00000407082 IGKV3D-7A0A0C4DH55 119 aa8.29□□□□□ -1.08
SMARCB1-203ENST00000407082 TRBV7-4A0A0J9YYF1 115 aa8.29□□□□□ -1.08
SMARCB1-203ENST00000407082 A0A1B0GW54 56 aa8.29□□□□□ -1.08
SMARCB1-203ENST00000407082 J3QL48 77 aa8.29□□□□□ -1.08
SMARCB1-203ENST00000407082 Q5VSD8 79 aa8.29□□□□□ -1.08
SMARCB1-203ENST00000407082 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
SMARCB1-203ENST00000407082 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
SMARCB1-203ENST00000407082 UQCRQO14949 82 aa8.27□□□□□ -1.09
SMARCB1-203ENST00000407082 CNBPP62633 177 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-203ENST00000407082 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-203ENST00000407082 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
SMARCB1-203ENST00000407082 MRPL55Q7Z7F7 128 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-203ENST00000407082 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
SMARCB1-203ENST00000407082 BCE1O60756 84 aa8.26□□□□□ -1.09
SMARCB1-203ENST00000407082 SPRR1AP35321 89 aa8.26□□□□□ -1.09
SMARCB1-203ENST00000407082 FUSP35637 526 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMARCB1-203ENST00000407082 CXCL6P80162 114 aa8.25□□□□□ -1.09
SMARCB1-203ENST00000407082 Q6ZRX8 168 aa8.25□□□□□ -1.09
SMARCB1-203ENST00000407082 C3orf22Q8N5N4 141 aa8.25□□□□□ -1.09
SMARCB1-203ENST00000407082 B5MCH6 92 aa8.24□□□□□ -1.09
SMARCB1-203ENST00000407082 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms