RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
RHBDD3-202ENST00000406335 NDUFC2O95298 119 aa12.06□□□□□ -0.48
RHBDD3-202ENST00000406335 KRTDAPP60985 99 aa12.06□□□□□ -0.48
RHBDD3-202ENST00000406335 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
RHBDD3-202ENST00000406335 B5MCH6 92 aa12.05□□□□□ -0.48
RHBDD3-202ENST00000406335 SPAG11AQ6PDA7 123 aa12.05□□□□□ -0.48
RHBDD3-202ENST00000406335 LITAFQ99732 161 aa12.05□□□□□ -0.48
RHBDD3-202ENST00000406335 IGLV6-57P01721 117 aa12.04□□□□□ -0.48
RHBDD3-202ENST00000406335 S100A12P80511 92 aa12.04□□□□□ -0.48
RHBDD3-202ENST00000406335 ZNF706Q9Y5V0 76 aaPredicted RBP12.04□□□□□ -0.48
RHBDD3-202ENST00000406335 S100A7L2Q5SY68 101 aa12.03□□□□□ -0.48
RHBDD3-202ENST00000406335 ZNF815PA8K554 130 aa12.02□□□□□ -0.49
RHBDD3-202ENST00000406335 ERC2-IT1O76042 136 aa12.02□□□□□ -0.49
RHBDD3-202ENST00000406335 Q9BRP9 147 aa12.01□□□□□ -0.49
RHBDD3-202ENST00000406335 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
RHBDD3-202ENST00000406335 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
RHBDD3-202ENST00000406335 TIMM17BO60830 172 aa11.99□□□□□ -0.49
RHBDD3-202ENST00000406335 TRAV23DV6A0A075B6W5 121 aa11.98□□□□□ -0.49
RHBDD3-202ENST00000406335 Q6ZRX8 168 aa11.98□□□□□ -0.49
RHBDD3-202ENST00000406335 LINC00483Q53H64 154 aa11.96□□□□□ -0.49
RHBDD3-202ENST00000406335 ANKRD39Q53RE8 183 aa11.96□□□□□ -0.49
RHBDD3-202ENST00000406335 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
RHBDD3-202ENST00000406335 ATOH7Q8N100 152 aa11.96□□□□□ -0.49
RHBDD3-202ENST00000406335 SPANXCQ9NY87 97 aa11.95□□□□□ -0.5
RHBDD3-202ENST00000406335 C20orf202A1L168 122 aa11.94□□□□□ -0.5
RHBDD3-202ENST00000406335 ZNF73O43830 326 aaPredicted RBP11.94□□□□□ -0.5
RHBDD3-202ENST00000406335 SEC61BP60468 96 aaKnown RBP11.94□□□□□ -0.5
RHBDD3-202ENST00000406335 ASB16-AS1Q495Z4 193 aa11.94□□□□□ -0.5
RHBDD3-202ENST00000406335 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
RHBDD3-202ENST00000406335 Q8NBF4 154 aa11.93□□□□□ -0.5
RHBDD3-202ENST00000406335 OR13C6PQ8NH95 151 aa11.92□□□□□ -0.5
RHBDD3-202ENST00000406335 KRTAP13-3Q3SY46 172 aa11.91□□□□□ -0.5
RHBDD3-202ENST00000406335 FSIP2Q5CZC0 6907 aa11.9□□□□□ -0.5
RHBDD3-202ENST00000406335 IGLV9-49A0A0B4J1Y8 123 aa11.89□□□□□ -0.51
RHBDD3-202ENST00000406335 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
RHBDD3-202ENST00000406335 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
RHBDD3-202ENST00000406335 CRCT1Q9UGL9 99 aa11.89□□□□□ -0.51
RHBDD3-202ENST00000406335 S100A1P23297 94 aa11.88□□□□□ -0.51
RHBDD3-202ENST00000406335 PCP2Q8IVA1 136 aa11.88□□□□□ -0.51
RHBDD3-202ENST00000406335 SPANXDQ9BXN6 97 aa11.88□□□□□ -0.51
RHBDD3-202ENST00000406335 MOBPQ13875 183 aa11.87□□□□□ -0.51
RHBDD3-202ENST00000406335 HIST3H2BBQ8N257 126 aa11.87□□□□□ -0.51
RHBDD3-202ENST00000406335 ST20-AS1Q8NBB2 130 aa11.87□□□□□ -0.51
RHBDD3-202ENST00000406335 SPINK1P00995 79 aa11.86□□□□□ -0.51
RHBDD3-202ENST00000406335 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
RHBDD3-202ENST00000406335 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
RHBDD3-202ENST00000406335 LINC00518Q8N0U6 118 aa11.84□□□□□ -0.51
RHBDD3-202ENST00000406335 HIST1H2BLQ99880 126 aa11.84□□□□□ -0.51
RHBDD3-202ENST00000406335 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.52
RHBDD3-202ENST00000406335 S100A2P29034 98 aa11.82□□□□□ -0.52
RHBDD3-202ENST00000406335 AKR1D1P51857 326 aa11.81□□□□□ -0.52
RHBDD3-202ENST00000406335 SSBP3-AS1Q7Z2R9 100 aa11.81□□□□□ -0.52
RHBDD3-202ENST00000406335 IFITM1P13164 125 aa11.8□□□□□ -0.52
RHBDD3-202ENST00000406335 C6orf99Q4VX62 202 aa11.8□□□□□ -0.52
RHBDD3-202ENST00000406335 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
RHBDD3-202ENST00000406335 C9orf153Q5TBE3 101 aa11.78□□□□□ -0.52
RHBDD3-202ENST00000406335 COX7BP24311 80 aa11.77□□□□□ -0.53
RHBDD3-202ENST00000406335 ELOF1P60002 83 aaKnown RBP11.77□□□□□ -0.53
RHBDD3-202ENST00000406335 SNRPEP62304 92 aaKnown RBP11.77□□□□□ -0.53
RHBDD3-202ENST00000406335 Q6ZVH6 145 aa11.77□□□□□ -0.53
RHBDD3-202ENST00000406335 COPS9Q8WXC6 57 aa11.77□□□□□ -0.53
RHBDD3-202ENST00000406335 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
RHBDD3-202ENST00000406335 C5orf52A6NGY3 159 aa11.76□□□□□ -0.53
RHBDD3-202ENST00000406335 S100A6P06703 90 aa11.76□□□□□ -0.53
RHBDD3-202ENST00000406335 A6NDN8 102 aa11.73□□□□□ -0.53
RHBDD3-202ENST00000406335 SPRR1BP22528 89 aa11.73□□□□□ -0.53
RHBDD3-202ENST00000406335 Q8N377 158 aa11.72□□□□□ -0.53
RHBDD3-202ENST00000406335 SLC25A20O43772 301 aa11.71□□□□□ -0.53
RHBDD3-202ENST00000406335 HSBP1L1C9JCN9 74 aa11.7□□□□□ -0.54
RHBDD3-202ENST00000406335 RPS29P62273 56 aaKnown RBP11.7□□□□□ -0.54
RHBDD3-202ENST00000406335 TRBV7-6A0A0J9YX20 115 aa11.69□□□□□ -0.54
RHBDD3-202ENST00000406335 DEFB105AQ8NG35 78 aa11.68□□□□□ -0.54
RHBDD3-202ENST00000406335 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
RHBDD3-202ENST00000406335 XP32Q5T750 250 aa11.67□□□□□ -0.54
RHBDD3-202ENST00000406335 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
RHBDD3-202ENST00000406335 TAL2Q16559 108 aa11.66□□□□□ -0.54
RHBDD3-202ENST00000406335 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
RHBDD3-202ENST00000406335 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
RHBDD3-202ENST00000406335 SCGB1D1O95968 90 aa11.65□□□□□ -0.54
RHBDD3-202ENST00000406335 SLC25A34Q6PIV7 304 aa11.65□□□□□ -0.54
RHBDD3-202ENST00000406335 Q1RN00 199 aa11.64□□□□□ -0.55
RHBDD3-202ENST00000406335 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
RHBDD3-202ENST00000406335 TEX49A0A1B0GTD5 131 aa11.61□□□□□ -0.55
RHBDD3-202ENST00000406335 A4D1N5 150 aa11.61□□□□□ -0.55
RHBDD3-202ENST00000406335 CFC1BP0CG36 223 aa11.61□□□□□ -0.55
RHBDD3-202ENST00000406335 SMIM29Q86T20 159 aa11.6□□□□□ -0.55
RHBDD3-202ENST00000406335 LCE2CQ5TA81 110 aa11.59□□□□□ -0.55
RHBDD3-202ENST00000406335 IGLV8-61A0A075B6I0 122 aa11.57□□□□□ -0.56
RHBDD3-202ENST00000406335 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
RHBDD3-202ENST00000406335 COX8AP10176 69 aa11.56□□□□□ -0.56
RHBDD3-202ENST00000406335 MT1HP80294 61 aa11.56□□□□□ -0.56
RHBDD3-202ENST00000406335 PCOTHQ58A44 107 aa11.56□□□□□ -0.56
RHBDD3-202ENST00000406335 HIST1H4GQ99525 98 aa11.54□□□□□ -0.56
RHBDD3-202ENST00000406335 C12orf57Q99622 126 aa11.54□□□□□ -0.56
RHBDD3-202ENST00000406335 A0A0G2JQZ4 141 aa11.53□□□□□ -0.56
RHBDD3-202ENST00000406335 PRO1933Q9H354 126 aa11.53□□□□□ -0.56
RHBDD3-202ENST00000406335 NHP2Q9NX24 153 aaKnown RBP11.53□□□□□ -0.56
RHBDD3-202ENST00000406335 LIMD2Q9BT23 127 aa11.52□□□□□ -0.57
RHBDD3-202ENST00000406335 VAMP3Q15836 100 aa11.51□□□□□ -0.57
RHBDD3-202ENST00000406335 LINC00575Q6W349 94 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms